FFCP PHASE1:Mm9::chr9:123059935..123059969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21922 | |EntrezGene=21922 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=315 | |MCL_coexpression_id=315 | ||
|TSSclassifier=NA | |||
|UniProt=Q8CFZ6 | |UniProt=Q8CFZ6 | ||
|association_with_transcript=-94bp_to_ENSMUST00000026890,NM_011606,uc009sfw.2_5end | |association_with_transcript=-94bp_to_ENSMUST00000026890,NM_011606,uc009sfw.2_5end | ||
|cluster_id=chr9:123059935..123059969,+ | |||
|description=CAGE_peak_2_at_Clec3b_5end | |description=CAGE_peak_2_at_Clec3b_5end | ||
|id=chr9:123059935..123059969,+ | |id=chr9:123059935..123059969,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002293,2.33e-09,3;CL:0000192,6.88e-09,3;CL:0000359,6.88e-09,3;CL:0002539,6.88e-09,3;CL:0000514,6.88e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!5.83e-07!14;UBERON:0000117!5.83e-07!14;UBERON:0000171!5.83e-07!14;UBERON:0000170!5.83e-07!14;UBERON:0005597!5.83e-07!14;UBERON:0000118!5.83e-07!14 | |ontology_enrichment_uberon=UBERON:0002048!5.83e-07!14;UBERON:0000117!5.83e-07!14;UBERON:0000171!5.83e-07!14;UBERON:0000170!5.83e-07!14;UBERON:0005597!5.83e-07!14;UBERON:0000118!5.83e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.30e-16,14;UBERON:0000117,2.30e-16,14;UBERON:0000171,2.30e-16,14;UBERON:0000170,2.30e-16,14;UBERON:0005597,2.30e-16,14;UBERON:0000118,2.30e-16,14;UBERON:0005153,4.06e-13,17;UBERON:0005178,4.06e-13,17;UBERON:0005181,4.06e-13,17;UBERON:0002224,4.06e-13,17;UBERON:0000915,4.06e-13,17;UBERON:0008947,4.06e-13,17;UBERON:0003258,4.06e-13,17;UBERON:0000947,5.27e-11,4;UBERON:0001637,5.27e-11,4;UBERON:0004573,5.27e-11,4;UBERON:0003509,5.27e-11,4;UBERON:0004571,5.27e-11,4;UBERON:0010191,5.27e-11,4;UBERON:0004572,5.27e-11,4;UBERON:0005157,7.54e-11,20;UBERON:0001135,6.88e-09,3;UBERON:0004237,6.88e-09,3;UBERON:0004695,6.88e-09,3;UBERON:0002111,6.88e-09,3;UBERON:0004178,6.88e-09,3;UBERON:0000055,8.54e-09,5;UBERON:0007500,8.54e-09,5;UBERON:0001981,8.54e-09,5;UBERON:0002049,8.54e-09,5;UBERON:0007798,8.54e-09,5;UBERON:0004537,8.54e-09,5;UBERON:0006965,8.54e-09,5;UBERON:0000065,5.31e-08,41;UBERON:0001004,9.60e-08,42 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5825072537531,10.5432008468295,2.0190142737785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,1.15265491596466,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,1.12552522006336,1.06958773443767,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.842666520790511,2.72688516124892,2.07828803682295,2.12003744706204,0,17.9657068380045,20.3844191765317,14.2213340630666,0,0,0,0.5709193985953,0.258937883647172,0.148442139064825,0,0.608930956624282,0,0.301445281105245,0.352766121407114,0.125666591329675,0,1.44599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,0.292780797011547,0.628340120440365,0.510914110417183,0,0,0,0,0,0,0,0.511430914660661,0.20778804455956,0,0.611036183101898,0.124406970610093,0,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0,0.258703370739016,0,0,0,0,0,1.39300866608867,0.823128545631774,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.536546802799238,0.116765342367169,0.329119699826961,0.820837320395476,0.648550476366846,0.146199987425332,1.3173006917463,1.20785776884335,0.210289948564127,0.205809224758569,0,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0,0,0.795825888164603,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,1.10851914099963,0,0,0.169745085775188,0.234690248288502,1.00503754465089,3.09456733151818,1.75620283072019,1.7339865851681,3.10050565508285,1.43509291791738,3.76885623846197,2.24490476425664,2.31438493730419,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.488660878060728,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0,0.516856586336442,1.45413491791002,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0.98931751764888,2.58343082713449,0.422190474497091,0.835606408021955,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.944050424693745,0.41326727862668,0.523511883968059,0.90730481304255,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0.308132871494482,0,0,0.39736270956253,0,0.295379054349154,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,1.9318959403219,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919217542250071,0,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.561849044819294,0.320125762024346,0.631790158511746,0,0.231768651889711,0.578727661391115,0.412085900803307,0.588795680537589,1.37147700954166,0.354951612318675,0,0.726732083161643,0.658765662907314,0.592302255241736,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,0.711810108745045,0.886540341380071,0.818462086339379,1.08455788830176,0.578719832943424,0.249810577937946,0.935726433781634,1.28922632428979,0.765153328275374,0.220591419119515,0.695603506861264 | |phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5825072537531,10.5432008468295,2.0190142737785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,1.15265491596466,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,1.12552522006336,1.06958773443767,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.842666520790511,2.72688516124892,2.07828803682295,2.12003744706204,0,17.9657068380045,20.3844191765317,14.2213340630666,0,0,0,0.5709193985953,0.258937883647172,0.148442139064825,0,0.608930956624282,0,0.301445281105245,0.352766121407114,0.125666591329675,0,1.44599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,0.292780797011547,0.628340120440365,0.510914110417183,0,0,0,0,0,0,0,0.511430914660661,0.20778804455956,0,0.611036183101898,0.124406970610093,0,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0,0.258703370739016,0,0,0,0,0,1.39300866608867,0.823128545631774,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.536546802799238,0.116765342367169,0.329119699826961,0.820837320395476,0.648550476366846,0.146199987425332,1.3173006917463,1.20785776884335,0.210289948564127,0.205809224758569,0,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0,0,0.795825888164603,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,1.10851914099963,0,0,0.169745085775188,0.234690248288502,1.00503754465089,3.09456733151818,1.75620283072019,1.7339865851681,3.10050565508285,1.43509291791738,3.76885623846197,2.24490476425664,2.31438493730419,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.488660878060728,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0,0.516856586336442,1.45413491791002,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0.98931751764888,2.58343082713449,0.422190474497091,0.835606408021955,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.944050424693745,0.41326727862668,0.523511883968059,0.90730481304255,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0.308132871494482,0,0,0.39736270956253,0,0.295379054349154,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,1.9318959403219,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919217542250071,0,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.561849044819294,0.320125762024346,0.631790158511746,0,0.231768651889711,0.578727661391115,0.412085900803307,0.588795680537589,1.37147700954166,0.354951612318675,0,0.726732083161643,0.658765662907314,0.592302255241736,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,0.711810108745045,0.886540341380071,0.818462086339379,1.08455788830176,0.578719832943424,0.249810577937946,0.935726433781634,1.28922632428979,0.765153328275374,0.220591419119515,0.695603506861264 | ||
|short_description=p2@Clec3b | |short_description=p2@Clec3b | ||
}} | }} |
Latest revision as of 09:08, 26 September 2015
Short description: | p2@Clec3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clec3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:315 |
Association with transcript: | -94bp_to_ENSMUST00000026890, NM_011606, uc009sfw.2_5end |
EntrezGene: | Clec3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 2.33e-09 | 3 |
smooth muscle cell | 6.88e-09 | 3 |
vascular associated smooth muscle cell | 6.88e-09 | 3 |
aortic smooth muscle cell | 6.88e-09 | 3 |
smooth muscle myoblast | 6.88e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lung | 2.30e-16 | 14 |
respiratory tube | 2.30e-16 | 14 |
respiration organ | 2.30e-16 | 14 |
pair of lungs | 2.30e-16 | 14 |
lung primordium | 2.30e-16 | 14 |
lung bud | 2.30e-16 | 14 |
epithelial bud | 4.06e-13 | 17 |
thoracic cavity element | 4.06e-13 | 17 |
thoracic segment organ | 4.06e-13 | 17 |
thoracic cavity | 4.06e-13 | 17 |
thoracic segment of trunk | 4.06e-13 | 17 |
respiratory primordium | 4.06e-13 | 17 |
endoderm of foregut | 4.06e-13 | 17 |
aorta | 5.27e-11 | 4 |
artery | 5.27e-11 | 4 |
systemic artery | 5.27e-11 | 4 |
arterial blood vessel | 5.27e-11 | 4 |
systemic arterial system | 5.27e-11 | 4 |
aortic system | 5.27e-11 | 4 |
arterial system | 5.27e-11 | 4 |
epithelial fold | 7.54e-11 | 20 |
smooth muscle tissue | 6.88e-09 | 3 |
blood vessel smooth muscle | 6.88e-09 | 3 |
arterial system smooth muscle | 6.88e-09 | 3 |
artery smooth muscle tissue | 6.88e-09 | 3 |
aorta smooth muscle tissue | 6.88e-09 | 3 |
vessel | 8.54e-09 | 5 |
epithelial tube open at both ends | 8.54e-09 | 5 |
blood vessel | 8.54e-09 | 5 |
vasculature | 8.54e-09 | 5 |
vascular system | 8.54e-09 | 5 |
blood vasculature | 8.54e-09 | 5 |
vascular cord | 8.54e-09 | 5 |
respiratory tract | 5.31e-08 | 41 |
respiratory system | 9.60e-08 | 42 |