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FFCP PHASE1:Mm9::chr9:14589104..14589146,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17535
|EntrezGene=17535
|HGNC=
|HGNC=
|MCL_coexpression_id=2166
|MCL_coexpression_id=2166
|TSSclassifier=NA
|UniProt=Q61216,B2KF76
|UniProt=Q61216,B2KF76
|association_with_transcript=0bp_to_ENSMUST00000115632,ENSMUST00000147305_5end
|association_with_transcript=0bp_to_ENSMUST00000115632,ENSMUST00000147305_5end
|cluster_id=chr9:14589104..14589146,+
|description=CAGE_peak_1_at_Mre11a_5end
|description=CAGE_peak_1_at_Mre11a_5end
|id=chr9:14589104..14589146,+
|id=chr9:14589104..14589146,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!5.75e-14!29;UBERON:0001048!4.69e-12!147;UBERON:0002370!3.60e-11!23;UBERON:0000974!3.60e-11!23;UBERON:0004807!3.60e-11!23;UBERON:0005058!3.60e-11!23;UBERON:0003351!3.60e-11!23;UBERON:0009113!3.60e-11!23;UBERON:0003295!3.60e-11!23;UBERON:0009722!3.60e-11!23;UBERON:0005562!3.60e-11!23;UBERON:0007690!3.60e-11!23;UBERON:0003408!3.90e-11!24;UBERON:0002390!1.01e-10!45;UBERON:0003061!1.01e-10!45;UBERON:0006562!1.21e-10!24;UBERON:0001557!1.21e-10!24;UBERON:0001042!1.21e-10!24;UBERON:0008814!1.21e-10!24;UBERON:0009145!1.21e-10!24;UBERON:0002193!2.53e-10!48;UBERON:0001004!1.80e-09!42;UBERON:0000065!2.14e-09!41;UBERON:0000926!7.86e-09!193;UBERON:0004120!7.86e-09!193;UBERON:0006603!7.86e-09!193;UBERON:0000072!1.48e-08!27;UBERON:0003081!9.58e-08!88
|ontology_enrichment_uberon=UBERON:0004177!5.75e-14!29;UBERON:0001048!4.69e-12!147;UBERON:0002370!3.60e-11!23;UBERON:0000974!3.60e-11!23;UBERON:0004807!3.60e-11!23;UBERON:0005058!3.60e-11!23;UBERON:0003351!3.60e-11!23;UBERON:0009113!3.60e-11!23;UBERON:0003295!3.60e-11!23;UBERON:0009722!3.60e-11!23;UBERON:0005562!3.60e-11!23;UBERON:0007690!3.60e-11!23;UBERON:0003408!3.90e-11!24;UBERON:0002390!1.01e-10!45;UBERON:0003061!1.01e-10!45;UBERON:0006562!1.21e-10!24;UBERON:0001557!1.21e-10!24;UBERON:0001042!1.21e-10!24;UBERON:0008814!1.21e-10!24;UBERON:0009145!1.21e-10!24;UBERON:0002193!2.53e-10!48;UBERON:0001004!1.80e-09!42;UBERON:0000065!2.14e-09!41;UBERON:0000926!7.86e-09!193;UBERON:0004120!7.86e-09!193;UBERON:0006603!7.86e-09!193;UBERON:0000072!1.48e-08!27;UBERON:0003081!9.58e-08!88
|ontology_enrichment_uberon_v019_2=UBERON:0007811,2.62e-14,36;UBERON:0004177,5.75e-14,29;UBERON:0005057,5.75e-14,29;UBERON:0000153,2.02e-13,43;UBERON:0001048,6.59e-13,134;UBERON:0000077,2.35e-11,35;UBERON:0002370,3.60e-11,23;UBERON:0000974,3.60e-11,23;UBERON:0004807,3.60e-11,23;UBERON:0005058,3.60e-11,23;UBERON:0003351,3.60e-11,23;UBERON:0009113,3.60e-11,23;UBERON:0003295,3.60e-11,23;UBERON:0009722,3.60e-11,23;UBERON:0005562,3.60e-11,23;UBERON:0007690,3.60e-11,23;UBERON:0003408,3.90e-11,24;UBERON:0002390,1.02e-10,45;UBERON:0003061,1.02e-10,45;UBERON:0006562,1.21e-10,24;UBERON:0001557,1.21e-10,24;UBERON:0001042,1.21e-10,24;UBERON:0008814,1.21e-10,24;UBERON:0009145,1.21e-10,24;UBERON:0000926,2.17e-10,120;UBERON:0004120,2.17e-10,120;UBERON:0006603,2.17e-10,120;UBERON:0002193,2.58e-10,48;UBERON:0002405,2.58e-10,48;UBERON:0001004,1.80e-09,42;UBERON:0000065,2.14e-09,41;UBERON:0000072,1.48e-08,27;UBERON:0003081,2.38e-07,87
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48783504,9.72048067396211,9.61806161666556,6.76923947613151,9.44050424693745,7.76942483818158,7.59092231753686,6.35113369129785,8.07741107013003,33.8215763210514,8.97099276263873,8.43838301331198,8.94475466382619,7.36210993823067,10.9821481569006,8.56707842114004,8.33308063001281,11.1150905091254,21.2594026326885,27.938910607013,10.7443781013581,9.52808511863772,9.0385642305048,15.4605779343576,17.7236428710807,14.7024202538136,17.6687310794354,18.7565699511713,20.496189339474,19.35652889037,17.2412776583997,16.3729239642784,16.7408604454173,17.4146584250538,6.57518112484113,7.32553646134413,6.10054224944435,10.5767308309369,8.113962949352,5.44279178808428,6.95976172215607,4.50173596066038,7.02200945649509,2.82375921308533,3.68260189205742,3.43737308063638,6.18671456437275,7.53590771747707,4.5323633843382,5.40018000185445,4.05289082901798,3.62513927187364,5.69536342927002,7.88783841639743,10.3746467084268,7.68301225893604,7.29320151204882,5.65955539095552,5.51530525350042,4.88942801163553,6.59312183164461,7.38114182061175,7.07552192938633,7.85785829659743,8.11093267960128,7.39767909012071,7.2988673741551,7.69635284005218,6.66811167796303,7.53248118641561,6.75182271622968,4.12085900803307,8.39033844766065,6.85738504770831,5.50174999093946,4.76872379894642,7.99405291477807,6.30532848782715,6.26148098398406,8.04883080640199,6.83981249738391,7.74083448921412,3.92799590160417,7.82991119619549,7.58484514291839,5.32000356120596,5.57772628269478,7.52335782826451,6.49507502638659,8.88940112092552,4.94203424311086,4.59091996965224,5.51478547798789,9.27471342481686
|phase1_expression=8.64803774365887,2.79180326111489,3.63999391511629,3.93203474698879,5.00895729946347,2.35030980676646,2.56973904655078,20.2723617803275,9.85521055061667,5.85161315804984,20.7173741552861,21.6980272467315,21.2288905114695,20.7186353733024,9.32707333083856,15.3881203216268,12.5921138063066,20.6627718309646,24.680598049033,18.2487550273153,11.3958008802433,11.4184593881018,11.2315909329742,6.23970448894286,5.27641346454491,2.8711598205751,4.30761996159075,4.52489588640367,3.99049180858385,5.54466285471848,5.76499327703792,8.89042942843484,6.1506478758457,0,8.66554859253824,8.47796691328311,7.75843553797003,9.62622750694888,13.2827008569046,5.23523743973798,4.70585190424811,6.14740936462601,8.73918635456076,4.65818226509636,6.38674666682942,4.9557623083654,0.782391344348039,3.2703773457067,0.659058548203415,2.13872888981712,1.81982348112971,4.31257693094915,18.1205214542355,9.42970784614748,12.0993767691287,4.3734104126111,2.86533439938757,4.12537673821954,4.65327859977075,2.64495489636016,4.43681982454325,2.37191172448392,0.889294796111139,1.3498495759221,0.988866362566974,0.7104801149461,1.49800055259202,2.30530983192933,6.84351441235953,3.78016627328734,3.78584930432488,2.28520787523043,3.53389665522582,7.34944795289724,5.55903731905771,5.51531271966013,4.40463523997555,4.97980618532232,4.6081959976873,3.42904348098504,5.76372154695181,6.77187381723788,2.51264699101243,3.37657566019008,6.1119299110724,2.65165726926301,6.40672563595963,2.23679334990361,9.31432177998164,11.260162455911,4.34796733052517,2.58127163094416,1.3599426674155,3.2382191498269,3.89865850468601,1.34408066129201,5.89866564553358,8.35108580632483,5.71529210126311,7.77347063922748,9.01397886570755,8.98285341900225,7.64415719119937,14.2213340630666,6.92771331235885,4.81383744402687,4.54972000513305,4.90990682791958,17.3488382043605,7.42210695324124,7.80683970447611,4.26251669636998,8.30215790121811,5.72746034099966,6.46737889246376,5.02666365318702,7.16865406429684,5.35017620603673,8.84610551949874,8.08834249737046,7.95029466457417,13.5765070877862,5.59175283654366,11.1256702864388,7.33063473847093,4.08731288333746,9.10594946244994,6.59893004092748,6.60765180779936,7.9389038884556,7.77751024791665,5.52879149296603,5.73620256634512,6.39288643325826,6.2336413367868,6.00292673350703,8.7581852911272,9.70374370758726,4.54900965180614,8.62811609134543,10.7999967659044,8.73627996847197,11.343914177737,15.2211866014072,14.0155188251735,12.2989171473456,11.9938207436453,9.05461797586555,9.91612767491074,10.2117283290622,6.68614271823006,6.1374805079721,8.34141747676794,6.61679116392116,6.58502836505419,10.7478504081986,9.83098462238529,6.43369767786788,9.37739548005456,8.07790512888457,10.3191466391682,8.10279276574567,5.20838418287463,8.65762619688577,9.10175966035532,9.99895962426754,8.04820204198858,4.90414437942112,7.07607354627966,9.85004784474571,6.48550476366846,6.14039947186396,9.87975518809728,6.1734952629771,4.41608891984667,4.93942139420565,7.93005079161115,5.55346189993443,5.97207101498655,9.28946687441754,8.24751752461397,9.27744213267376,5.55945109612176,6.84812254005213,4.2707615539006,4.77626968699632,6.53471542880701,7.56034593756373,6.43381487493096,6.29173586057955,6.70027954611552,7.16908583715722,5.50036912763937,9.82537208443668,10.1436962105772,7.127796474586,6.7883370508669,7.50453272826409,6.45012678667424,7.23289725100051,4.39596437955849,6.66344685177723,4.44678940630723,10.8449318715461,9.23827277032054,11.2431056192427,7.91154473415161,9.16473207059184,6.87489799809833,4.89083433666378,5.99900339067631,6.31491250332587,7.18841032636773,7.81495990103857,6.55279113540577,5.05157755894223,6.09951205974501,4.82443521363367,7.7596339869974,7.20067364727842,10.9186534216157,9.16623463186016,9.62230017982859,7.03526281255626,6.9032655856944,6.04914308359176,8.98520321405289,7.9727288273559,9.24837658213425,11.3065687153859,10.7064688756855,6.65385669474953,7.53956419696361,4.89515115436839,7.37646409528554,6.34654516500885,4.81651769963376,7.2671245687166,5.90165803356032,6.05930225290495,6.62567260774139,7.80877488593277,6.89354872744957,7.16906393857656,6.01556420022464,7.07691326972081,6.47697122679831,6.13737301613755,7.11518000303742,7.39039027770156,7.2389443456217,8.01295216502649,8.1443479676788,9.23832688646199,3.98235415019888,6.31229654002952,8.16273603804828,6.78978287121233,3.54362271456927,8.30074899448604,4.13485269069154,10.1789444253702,5.70395805415554,8.84902922220285,7.37930260024991,5.15677716240934,5.44703369206061,10.0834212657534,4.52755393239641,9.21649250635847,6.56158864476412,6.0645397984704,6.08831376227848,4.26250928760439,7.50949465803873,6.35496212591461,8.38007912608855,7.74965388824956,5.8127193610526,7.90099316558842,8.59480876822583,8.86360858623331,4.95517422270746,7.41701208042039,13.6696704638282,8.66824845445534,15.7415348264255,16.0113188453987,14.8996708215917,11.8964650067392,7.81900777971734,7.55737842547753,9.67399816630967,1.90934123603023,7.43389584915668,9.35269548783504,9.72048067396211,9.61806161666556,6.76923947613151,9.44050424693745,7.76942483818158,7.59092231753686,6.35113369129785,8.07741107013003,33.8215763210514,8.97099276263873,8.43838301331198,8.94475466382619,7.36210993823067,10.9821481569006,8.56707842114004,8.33308063001281,11.1150905091254,21.2594026326885,27.938910607013,10.7443781013581,9.52808511863772,9.0385642305048,15.4605779343576,17.7236428710807,14.7024202538136,17.6687310794354,18.7565699511713,20.496189339474,19.35652889037,17.2412776583997,16.3729239642784,16.7408604454173,17.4146584250538,6.57518112484113,7.32553646134413,6.10054224944435,10.5767308309369,8.113962949352,5.44279178808428,6.95976172215607,4.50173596066038,7.02200945649509,2.82375921308533,3.68260189205742,3.43737308063638,6.18671456437275,7.53590771747707,4.5323633843382,5.40018000185445,4.05289082901798,3.62513927187364,5.69536342927002,7.88783841639743,10.3746467084268,7.68301225893604,7.29320151204882,5.65955539095552,5.51530525350042,4.88942801163553,6.59312183164461,7.38114182061175,7.07552192938633,7.85785829659743,8.11093267960128,7.39767909012071,7.2988673741551,7.69635284005218,6.66811167796303,7.53248118641561,6.75182271622968,4.12085900803307,8.39033844766065,6.85738504770831,5.50174999093946,4.76872379894642,7.99405291477807,6.30532848782715,6.26148098398406,8.04883080640199,6.83981249738391,7.74083448921412,3.92799590160417,7.82991119619549,7.58484514291839,5.32000356120596,5.57772628269478,7.52335782826451,6.49507502638659,8.88940112092552,4.94203424311086,4.59091996965224,5.51478547798789,9.27471342481686
|short_description=p1@Mre11a
|short_description=p1@Mre11a
}}
}}

Latest revision as of 10:08, 26 September 2015

Short description:p1@Mre11a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mre11a_5end
Coexpression cluster:MCL_coexpression_mm9:2166
Association with transcript: 0bp_to_ENSMUST00000115632, ENSMUST00000147305_5end
EntrezGene:Mre11a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mre11a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.86
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F121.70
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.39
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.66
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.68
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.23
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.39
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.12
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D99.31
Mouse Schwann, donor2.CNhs12573.11746-123F911.26
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.01
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.91
accessory axillary lymph node, adult.CNhs10475.1063-29H917.35
adrenal gland, adult.CNhs10508.49-24D77.42
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I18.30
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I35.03
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F58.09
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.11
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.61
corpora quadrigemina, adult.CNhs10501.16-22A47.94
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B26.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.76
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.70
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G48.63
eyeball, embryo E12.CNhs11016.345-16C610.80
eyeball, embryo E14.CNhs10521.399-16E28.74
eyeball, embryo E15.CNhs10593.426-16C911.34
eyeball, embryo E17.CNhs11023.1261-18D415.22
eyeball, neonate N00.CNhs11207.633-15C614.02
eyeball, neonate N01.CNhs11140.1532-43E712.30
eyeball, neonate N02.CNhs11205.1551-44G811.99
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E29.92
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E26.69
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I610.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.38
heart, embryo E11.CNhs10586.331-24E98.08
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I98.10
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C69.10
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E34.90
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G19.85
heart, neonate N16.CNhs11209.782-15G16.49
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D39.88
heart, neonate N30.CNhs11202.1390-42D26.17
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D88.25
intestine, embryo E16.CNhs10585.463-22H49.28
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G17.17
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F89.83
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I27.13
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G77.50
kidney, neonate N10.CNhs11206.758-6D56.45
kidney, neonate N20.CNhs11113.832-19I17.23
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H16.66
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F810.84
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E111.24
liver, embryo E15.CNhs10520.433-16D77.91
liver, embryo E16.CNhs10523.462-17F59.16
liver, embryo E17.CNhs10510.481-18A36.87
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F46.00
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H16.10
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F810.92
lung, embryo E15.CNhs11020.432-17C59.17
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E58.99
lung, neonate N07.CNhs11111.715-19A37.97
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A411.31
lung, neonate N25.CNhs11119.1359-25C710.71
lung, neonate N30.CNhs11133.1394-42H26.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I77.24
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E56.79
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E610.08
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F56.09
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I77.51
placenta, adult pregnant day17.CNhs10464.577-18G36.35
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C37.75
skin, neonate N00.CNhs11124.650-25G45.81
skin, neonate N03.CNhs11215.662-22H37.90
skin, neonate N06.CNhs11097.693-20I58.59
skin, neonate N10.CNhs11108.762-6C48.86
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C97.42
spleen, adult.CNhs10465.25-2G213.67
spleen, embryo E16.CNhs11035.461-43C18.67
spleen, embryo E18.CNhs11011.1271-21F215.74
spleen, neonate N10.CNhs11116.752-24D116.01
spleen, neonate N20.CNhs11112.824-19H114.90
spleen, neonate N25.CNhs11099.1354-25G311.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.67
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G89.35
stomach, embryo E16.CNhs11022.459-17D49.72
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B89.44
stomach, neonate N07.CNhs11210.718-18A97.77
stomach, neonate N25.CNhs11104.1355-25E47.59
stomach, neonate N30.CNhs11134.1386-42I16.35
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G533.82
testis, embryo E13.CNhs11031.389-23F58.97
testis, embryo E15.CNhs11034.443-27C58.44
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G510.98
testis, neonate N00.CNhs11189.1300-22B78.57
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D911.12
testis, neonate N20.CNhs11110.839-18H321.26
testis, neonate N30.CNhs11130.1391-42E227.94
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I29.04
thymus, embryo E16.CNhs11002.456-26C515.46
thymus, embryo E17.CNhs10581.478-18C117.72
thymus, embryo E18.CNhs10595.1273-19G414.70
thymus, neonate N02.CNhs11181.1541-43F817.67
thymus, neonate N03.CNhs11137.2104-43C718.76
thymus, neonate N06.CNhs11197.681-26C420.50
thymus, neonate N07.CNhs11211.713-19D319.36
thymus, neonate N10.CNhs11194.748-24E417.24
thymus, neonate N20.CNhs11186.820-7A216.37
thymus, neonate N25.CNhs11125.1362-25G716.74
thymus, neonate N30.CNhs11132.1393-42G217.41
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.10
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.58
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E56.96
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I87.89
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H27.68
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
craniocervical region2.62e-1436
hemopoietic organ5.75e-1429
immune organ5.75e-1429
anterior region of body2.02e-1343
primordium6.59e-13134
mixed endoderm/mesoderm-derived structure2.35e-1135
thymus3.60e-1123
neck3.60e-1123
respiratory system epithelium3.60e-1123
hemolymphoid system gland3.60e-1123
pharyngeal epithelium3.60e-1123
thymic region3.60e-1123
pharyngeal gland3.60e-1123
entire pharyngeal arch endoderm3.60e-1123
thymus primordium3.60e-1123
early pharyngeal endoderm3.60e-1123
gland of gut3.90e-1124
hematopoietic system1.02e-1045
blood island1.02e-1045
pharynx1.21e-1024
upper respiratory tract1.21e-1024
chordate pharynx1.21e-1024
pharyngeal arch system1.21e-1024
pharyngeal region of foregut1.21e-1024
mesoderm2.17e-10120
mesoderm-derived structure2.17e-10120
presumptive mesoderm2.17e-10120
hemolymphoid system2.58e-1048
immune system2.58e-1048
respiratory system1.80e-0942
respiratory tract2.14e-0941
segment of respiratory tract1.48e-0827
lateral plate mesoderm2.38e-0787
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