FFCP PHASE1:Mm9::chr9:14589104..14589146,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:14589104..14589146,+ to FFCP PHASE1:Mm9::chr9:14589104..14589146,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17535 | |EntrezGene=17535 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2166 | |||
|TSSclassifier=NA | |||
|UniProt=Q61216,B2KF76 | |UniProt=Q61216,B2KF76 | ||
|association_with_transcript=0bp_to_ENSMUST00000115632,ENSMUST00000147305_5end | |||
|cluster_id=chr9:14589104..14589146,+ | |||
|description=CAGE_peak_1_at_Mre11a_5end | |||
|id=chr9:14589104..14589146,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.75e-14!29;UBERON:0001048!4.69e-12!147;UBERON:0002370!3.60e-11!23;UBERON:0000974!3.60e-11!23;UBERON:0004807!3.60e-11!23;UBERON:0005058!3.60e-11!23;UBERON:0003351!3.60e-11!23;UBERON:0009113!3.60e-11!23;UBERON:0003295!3.60e-11!23;UBERON:0009722!3.60e-11!23;UBERON:0005562!3.60e-11!23;UBERON:0007690!3.60e-11!23;UBERON:0003408!3.90e-11!24;UBERON:0002390!1.01e-10!45;UBERON:0003061!1.01e-10!45;UBERON:0006562!1.21e-10!24;UBERON:0001557!1.21e-10!24;UBERON:0001042!1.21e-10!24;UBERON:0008814!1.21e-10!24;UBERON:0009145!1.21e-10!24;UBERON:0002193!2.53e-10!48;UBERON:0001004!1.80e-09!42;UBERON:0000065!2.14e-09!41;UBERON:0000926!7.86e-09!193;UBERON:0004120!7.86e-09!193;UBERON:0006603!7.86e-09!193;UBERON:0000072!1.48e-08!27;UBERON:0003081!9.58e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,2.62e-14,36;UBERON:0004177,5.75e-14,29;UBERON:0005057,5.75e-14,29;UBERON:0000153,2.02e-13,43;UBERON:0001048,6.59e-13,134;UBERON:0000077,2.35e-11,35;UBERON:0002370,3.60e-11,23;UBERON:0000974,3.60e-11,23;UBERON:0004807,3.60e-11,23;UBERON:0005058,3.60e-11,23;UBERON:0003351,3.60e-11,23;UBERON:0009113,3.60e-11,23;UBERON:0003295,3.60e-11,23;UBERON:0009722,3.60e-11,23;UBERON:0005562,3.60e-11,23;UBERON:0007690,3.60e-11,23;UBERON:0003408,3.90e-11,24;UBERON:0002390,1.02e-10,45;UBERON:0003061,1.02e-10,45;UBERON:0006562,1.21e-10,24;UBERON:0001557,1.21e-10,24;UBERON:0001042,1.21e-10,24;UBERON:0008814,1.21e-10,24;UBERON:0009145,1.21e-10,24;UBERON:0000926,2.17e-10,120;UBERON:0004120,2.17e-10,120;UBERON:0006603,2.17e-10,120;UBERON:0002193,2.58e-10,48;UBERON:0002405,2.58e-10,48;UBERON:0001004,1.80e-09,42;UBERON:0000065,2.14e-09,41;UBERON:0000072,1.48e-08,27;UBERON:0003081,2.38e-07,87 | |||
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| ||
|short_description=p1@Mre11a | |||
}} | }} |
Latest revision as of 10:08, 26 September 2015
Short description: | p1@Mre11a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mre11a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2166 |
Association with transcript: | 0bp_to_ENSMUST00000115632, ENSMUST00000147305_5end |
EntrezGene: | Mre11a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
craniocervical region | 2.62e-14 | 36 |
hemopoietic organ | 5.75e-14 | 29 |
immune organ | 5.75e-14 | 29 |
anterior region of body | 2.02e-13 | 43 |
primordium | 6.59e-13 | 134 |
mixed endoderm/mesoderm-derived structure | 2.35e-11 | 35 |
thymus | 3.60e-11 | 23 |
neck | 3.60e-11 | 23 |
respiratory system epithelium | 3.60e-11 | 23 |
hemolymphoid system gland | 3.60e-11 | 23 |
pharyngeal epithelium | 3.60e-11 | 23 |
thymic region | 3.60e-11 | 23 |
pharyngeal gland | 3.60e-11 | 23 |
entire pharyngeal arch endoderm | 3.60e-11 | 23 |
thymus primordium | 3.60e-11 | 23 |
early pharyngeal endoderm | 3.60e-11 | 23 |
gland of gut | 3.90e-11 | 24 |
hematopoietic system | 1.02e-10 | 45 |
blood island | 1.02e-10 | 45 |
pharynx | 1.21e-10 | 24 |
upper respiratory tract | 1.21e-10 | 24 |
chordate pharynx | 1.21e-10 | 24 |
pharyngeal arch system | 1.21e-10 | 24 |
pharyngeal region of foregut | 1.21e-10 | 24 |
mesoderm | 2.17e-10 | 120 |
mesoderm-derived structure | 2.17e-10 | 120 |
presumptive mesoderm | 2.17e-10 | 120 |
hemolymphoid system | 2.58e-10 | 48 |
immune system | 2.58e-10 | 48 |
respiratory system | 1.80e-09 | 42 |
respiratory tract | 2.14e-09 | 41 |
segment of respiratory tract | 1.48e-08 | 27 |
lateral plate mesoderm | 2.38e-07 | 87 |