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FFCP PHASE1:Mm9::chr1:173275531..173275574,-: Difference between revisions

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{{FFCP|EntrezGene=27045|HGNC=|UniProt=|association_with_transcript=38bp_to_ENSMUST00000146428_5end|description=CAGE_peak_3_at_Nit1_5end|id=chr1:173275531..173275574,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,5.58e-11,6;CL:0000187,5.58e-11,6;CL:0000056,5.58e-11,6;CL:0000222,2.29e-09,7;CL:0000192,2.53e-09,3;CL:0000359,2.53e-09,3;CL:0002539,2.53e-09,3;CL:0000514,2.53e-09,3;CL:0000355,3.26e-07,9;CL:0002605,8.15e-07,2;CL:0002604,8.15e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.53e-09,3;UBERON:0004237,2.53e-09,3;UBERON:0004695,2.53e-09,3;UBERON:0002111,2.53e-09,3;UBERON:0004178,2.53e-09,3;UBERON:0005256,5.79e-09,45;UBERON:0000331,4.38e-08,3;UBERON:0002116,4.38e-08,3;UBERON:0001204,4.38e-08,3;UBERON:0001168,4.38e-08,3;UBERON:0003914,3.12e-07,47;UBERON:0001134,3.26e-07,9;UBERON:0002036,3.26e-07,9;UBERON:0002385,3.26e-07,9;UBERON:0000486,3.26e-07,9;UBERON:0007503,3.26e-07,9;UBERON:0001015,3.26e-07,9;UBERON:0002329,3.26e-07,9;UBERON:0003082,3.26e-07,9;UBERON:0003059,3.26e-07,9;UBERON:0007282,3.26e-07,9;UBERON:0004290,3.26e-07,9;UBERON:0009618,3.26e-07,9;UBERON:0000947,4.47e-07,4;UBERON:0001637,4.47e-07,4;UBERON:0004573,4.47e-07,4;UBERON:0003509,4.47e-07,4;UBERON:0004571,4.47e-07,4;UBERON:0010191,4.47e-07,4;UBERON:0004572,4.47e-07,4|phase1_expression=0,0.348975407639361,1.81999695755814,0.90739263392049,0.500895729946347,0.839396359559449,0.700837921786577,0.129123323441576,0,0.468129052643987,0,0.239316476986009,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0,0,0,1.87095238332354,0,0,1.27993938234725,1.14704640533585,0,1.7230479846363,0.861884930743556,1.14014051673824,1.26015064879965,1.10865255327652,0.635030673459631,0,0,0.577703239502549,0,0,0.418531630736908,0,0,0,0,0,3.02152363141385,3.04130793658544,1.46837401729345,0.782391344348039,0.218025156380447,2.63623419281366,2.13872888981712,0.839918529752175,1.43752564364972,0,1.45072428402269,0,1.02903774414379,0.286533439938757,1.03134418455488,0,0,0,0.677689064138264,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0.210324961351382,0,0.662605622854841,0,0.191690942036473,0.919218786610021,1.10115880999389,1.0214987046815,0.307213066512487,0,0.0914876436024097,0,0.837548997004143,1.68828783009504,0.61119299110724,0.294628585473668,0.711858403995515,0,0.151452386666368,0.226714680320357,0.869593466105033,0,3.39985666853875,8.63525106620507,1.29955283489534,0.448026887097336,4.91555470461132,0.340860645156116,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0,7.19358442230078,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0.301445281105245,0.470354828542819,0.251333182659351,0.741584903203122,0.433798070759735,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0.124406970610093,3.53811861807145,0.631325567659422,0.130120442962704,0.229902104433473,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0.420579897128254,0.205809224758569,0,1.05780226665418,0,0,0,0,0,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.442830443938806,0.31399745568275,0.987177311374404,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,1.94562272130042,1.64736847912849,0,0.744281895337007,1.24815069245824,0.252578877947112,0.717589654087649,1.4473305640901,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0,0,0.433947175744535,0,0,0,0,0,0,1.3114795630134,0.252470927204373,0,0.390438744296638,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0.876767573733936,0.395287777946524,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0.847328283455281,1.10264199027481,0.49465875882444,0.645857706783622,0.301564624640779,0.477489376012546,0.984845398470368,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0.316011120628178,0,0.410843828659309,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0.533447646584999,0.302478555410522,0.194915761479505,0.192423683280659,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.503653849092235,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0.44449345560323,0.206035057238894,0,0,0,0,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0.476872379894642,0,0.0941093804153306,0.169229215783353,0,0.526139422875686,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0.441182838239031,0|short_description=p3@Nit1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27045
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=38bp_to_ENSMUST00000146428_5end
|cluster_id=chr1:173275531..173275574,-
|description=CAGE_peak_3_at_Nit1_5end
|id=chr1:173275531..173275574,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000680,5.58e-11,6;CL:0000187,5.58e-11,6;CL:0000056,5.58e-11,6;CL:0000222,2.29e-09,7;CL:0000192,2.53e-09,3;CL:0000359,2.53e-09,3;CL:0002539,2.53e-09,3;CL:0000514,2.53e-09,3;CL:0000355,3.26e-07,9;CL:0002605,8.15e-07,2;CL:0002604,8.15e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.53e-09,3;UBERON:0004237,2.53e-09,3;UBERON:0004695,2.53e-09,3;UBERON:0002111,2.53e-09,3;UBERON:0004178,2.53e-09,3;UBERON:0005256,5.79e-09,45;UBERON:0000331,4.38e-08,3;UBERON:0002116,4.38e-08,3;UBERON:0001204,4.38e-08,3;UBERON:0001168,4.38e-08,3;UBERON:0003914,3.12e-07,47;UBERON:0001134,3.26e-07,9;UBERON:0002036,3.26e-07,9;UBERON:0002385,3.26e-07,9;UBERON:0000486,3.26e-07,9;UBERON:0007503,3.26e-07,9;UBERON:0001015,3.26e-07,9;UBERON:0002329,3.26e-07,9;UBERON:0003082,3.26e-07,9;UBERON:0003059,3.26e-07,9;UBERON:0007282,3.26e-07,9;UBERON:0004290,3.26e-07,9;UBERON:0009618,3.26e-07,9;UBERON:0000947,4.47e-07,4;UBERON:0001637,4.47e-07,4;UBERON:0004573,4.47e-07,4;UBERON:0003509,4.47e-07,4;UBERON:0004571,4.47e-07,4;UBERON:0010191,4.47e-07,4;UBERON:0004572,4.47e-07,4
|phase1_expression=0,0.348975407639361,1.81999695755814,0.90739263392049,0.500895729946347,0.839396359559449,0.700837921786577,0.129123323441576,0,0.468129052643987,0,0.239316476986009,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0,0,0,1.87095238332354,0,0,1.27993938234725,1.14704640533585,0,1.7230479846363,0.861884930743556,1.14014051673824,1.26015064879965,1.10865255327652,0.635030673459631,0,0,0.577703239502549,0,0,0.418531630736908,0,0,0,0,0,3.02152363141385,3.04130793658544,1.46837401729345,0.782391344348039,0.218025156380447,2.63623419281366,2.13872888981712,0.839918529752175,1.43752564364972,0,1.45072428402269,0,1.02903774414379,0.286533439938757,1.03134418455488,0,0,0,0.677689064138264,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0.210324961351382,0,0.662605622854841,0,0.191690942036473,0.919218786610021,1.10115880999389,1.0214987046815,0.307213066512487,0,0.0914876436024097,0,0.837548997004143,1.68828783009504,0.61119299110724,0.294628585473668,0.711858403995515,0,0.151452386666368,0.226714680320357,0.869593466105033,0,3.39985666853875,8.63525106620507,1.29955283489534,0.448026887097336,4.91555470461132,0.340860645156116,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0,7.19358442230078,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0.301445281105245,0.470354828542819,0.251333182659351,0.741584903203122,0.433798070759735,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0.124406970610093,3.53811861807145,0.631325567659422,0.130120442962704,0.229902104433473,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0.420579897128254,0.205809224758569,0,1.05780226665418,0,0,0,0,0,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.442830443938806,0.31399745568275,0.987177311374404,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,1.94562272130042,1.64736847912849,0,0.744281895337007,1.24815069245824,0.252578877947112,0.717589654087649,1.4473305640901,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0,0,0.433947175744535,0,0,0,0,0,0,1.3114795630134,0.252470927204373,0,0.390438744296638,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0.876767573733936,0.395287777946524,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0.847328283455281,1.10264199027481,0.49465875882444,0.645857706783622,0.301564624640779,0.477489376012546,0.984845398470368,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0.316011120628178,0,0.410843828659309,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0.533447646584999,0.302478555410522,0.194915761479505,0.192423683280659,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.503653849092235,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0.44449345560323,0.206035057238894,0,0,0,0,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0.476872379894642,0,0.0941093804153306,0.169229215783353,0,0.526139422875686,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0.441182838239031,0
|short_description=p3@Nit1
}}

Latest revision as of 18:54, 26 September 2015

Short description:p3@Nit1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nit1_5end
Coexpression cluster:NA
Association with transcript: 38bp_to_ENSMUST00000146428_5end
EntrezGene:Nit1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nit1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.19
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
smooth muscle tissue2.53e-093
blood vessel smooth muscle2.53e-093
arterial system smooth muscle2.53e-093
artery smooth muscle tissue2.53e-093
aorta smooth muscle tissue2.53e-093
trunk mesenchyme5.79e-0945
ileal mucosa4.38e-083
ileum4.38e-083
mucosa of small intestine4.38e-083
wall of small intestine4.38e-083
epithelial tube3.12e-0747
skeletal muscle tissue3.26e-079
striated muscle tissue3.26e-079
muscle tissue3.26e-079
multilaminar epithelium3.26e-079
epithelial vesicle3.26e-079
musculature3.26e-079
somite3.26e-079
myotome3.26e-079
presomitic mesoderm3.26e-079
presumptive segmental plate3.26e-079
dermomyotome3.26e-079
trunk paraxial mesoderm3.26e-079
aorta4.47e-074
artery4.47e-074
systemic artery4.47e-074
arterial blood vessel4.47e-074
systemic arterial system4.47e-074
aortic system4.47e-074
arterial system4.47e-074
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