FFCP PHASE1:Mm9::chr6:129573858..129573884,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:129573858..129573884,- to FFCP PHASE1:Mm9::chr6:129573858..129573884,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27007 | |EntrezGene=27007 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=404 | |||
|TSSclassifier=NA | |||
|UniProt=O54709,Q3TCW7 | |UniProt=O54709,Q3TCW7 | ||
|association_with_transcript=0bp_to_ENSMUST00000095412,ENSMUST00000168919,NM_001083322,uc009egg.1,uc009egh.1,uc009egi.1_5end | |||
|cluster_id=chr6:129573858..129573884,- | |||
|description=CAGE_peak_2_at_Klrk1_5end | |||
|id=chr6:129573858..129573884,- | |||
|ontology_enrichment_celltype=CL:0000049!1.08e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.86e-15,19;CL:0000988,8.87e-11,32;CL:0002032,8.87e-11,32;CL:0000037,8.87e-11,32;CL:0000837,8.87e-11,32;CL:0000763,1.04e-10,16;CL:0000553,8.00e-08,6;CL:0000556,8.00e-08,6;CL:0000557,1.94e-07,7;CL:0002320,2.20e-07,46;CL:0000134,2.20e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.14e-14!70;UBERON:0002193!1.36e-10!48;UBERON:0002390!2.10e-09!45;UBERON:0003061!2.10e-09!45;UBERON:0000926!3.12e-08!193;UBERON:0004120!3.12e-08!193;UBERON:0006603!3.12e-08!193;UBERON:0005057!3.93e-08!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.65e-12,48;UBERON:0002405,3.65e-12,48;UBERON:0002390,1.03e-11,45;UBERON:0003061,1.03e-11,45;UBERON:0002371,1.04e-10,16;UBERON:0001474,2.84e-10,22;UBERON:0004765,2.84e-10,22;UBERON:0001434,2.84e-10,22;UBERON:0002106,1.28e-07,6;UBERON:0004457,1.28e-07,6;UBERON:0000042,1.28e-07,6;UBERON:0004854,1.28e-07,6;UBERON:0009034,1.28e-07,6;UBERON:0002095,1.28e-07,6;UBERON:0004782,1.28e-07,6;UBERON:0003281,1.28e-07,6;UBERON:0009664,1.28e-07,6;UBERON:0002296,1.28e-07,6;UBERON:0005602,1.28e-07,6;UBERON:0001179,1.28e-07,6;UBERON:0006293,1.28e-07,6;UBERON:0002384,2.20e-07,46;UBERON:0002204,2.70e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.82227740650843,2.09868563438444,2.83915948822414,3.97631857456642,2.54633791078818,0.765389611359628,2.87943758482567,5.48519557191764,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,1.10865255327652,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,2.58127163094416,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.68510327831436,12.4290184150642,1.1875371125186,0,0,0,0,0.23517741427141,0,0.247194967734374,0.722996784599558,2.65383165584962,0,1.10420759230197,0.969750506270444,0,0,0,1.02182822083437,5.27186547826049,2.39961092397363,5.33694953706872,0.299581278809645,0,0,0,0,0,0,0,1.8661045591514,0.505445516867349,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,2.80885274925294,3.86021860672073,3.6941254921427,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0.754005626400808,0,0.19496408711912,0,0,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.295220295959204,0.31399745568275,0.246794327843601,3.55743152504579,0.166845105716094,0,0.224862112384854,0,0,0,0.863088412352432,0.972811360650212,0.549122826376163,2.87536413054709,5.58211421502755,2.18426371180192,0.505157755894224,1.25578189465339,2.8946611281802,2.58654466233247,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0,0.81931657357869,1.72684981865896,2.16973587872267,4.52373851817817,6.52686820582452,0.983528546038072,1.10374698521893,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,1.81467135269789,2.65490276679926,0,0.302323556964751,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0.214337035031592,0,0,0,0,1.17335854031855,0,0,0,0.161464426695906,0.0603129249281559,0.358117032009409,0.164140899745061,0,0,3.58828849675491,0.206386867963223,1.66675074632741,1.50694765603753,2.46049609897845,3.20289442489132,0.339956859987711,0.279902904647316,0.967399816630967,0,0,0,0.216010681643603,0,0,0,0.330613822901344,0,0.90730481304255,1.86401793926078,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,2.52808896502543,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0.360586348559907,0.443068581523732,0.807731599585181,0.685861259894999,1.20991422164209,1.07203668813728,1.25075394132428,1.40252282617883,0.453460767230423,0,0,0,0.772758376128762,1.68914227906064,1.09890974560359,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.82227740650843,2.09868563438444,2.83915948822414,3.97631857456642,2.54633791078818,0.765389611359628,2.87943758482567,5.48519557191764,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,1.10865255327652,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,2.58127163094416,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.68510327831436,12.4290184150642,1.1875371125186,0,0,0,0,0.23517741427141,0,0.247194967734374,0.722996784599558,2.65383165584962,0,1.10420759230197,0.969750506270444,0,0,0,1.02182822083437,5.27186547826049,2.39961092397363,5.33694953706872,0.299581278809645,0,0,0,0,0,0,0,1.8661045591514,0.505445516867349,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,2.80885274925294,3.86021860672073,3.6941254921427,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0.754005626400808,0,0.19496408711912,0,0,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.295220295959204,0.31399745568275,0.246794327843601,3.55743152504579,0.166845105716094,0,0.224862112384854,0,0,0,0.863088412352432,0.972811360650212,0.549122826376163,2.87536413054709,5.58211421502755,2.18426371180192,0.505157755894224,1.25578189465339,2.8946611281802,2.58654466233247,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0,0.81931657357869,1.72684981865896,2.16973587872267,4.52373851817817,6.52686820582452,0.983528546038072,1.10374698521893,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,1.81467135269789,2.65490276679926,0,0.302323556964751,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0.214337035031592,0,0,0,0,1.17335854031855,0,0,0,0.161464426695906,0.0603129249281559,0.358117032009409,0.164140899745061,0,0,3.58828849675491,0.206386867963223,1.66675074632741,1.50694765603753,2.46049609897845,3.20289442489132,0.339956859987711,0.279902904647316,0.967399816630967,0,0,0,0.216010681643603,0,0,0,0.330613822901344,0,0.90730481304255,1.86401793926078,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,2.52808896502543,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0.360586348559907,0.443068581523732,0.807731599585181,0.685861259894999,1.20991422164209,1.07203668813728,1.25075394132428,1.40252282617883,0.453460767230423,0,0,0,0.772758376128762,1.68914227906064,1.09890974560359,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0.927471342481686 | ||
|short_description=p2@Klrk1 | |||
}} | }} |
Latest revision as of 19:17, 26 September 2015
Short description: | p2@Klrk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Klrk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:404 |
Association with transcript: | 0bp_to_ENSMUST00000095412, ENSMUST00000168919, NM_001083322, uc009egg.1, uc009egh.1, uc009egi.1_5end |
EntrezGene: | Klrk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.86e-15 | 19 |
hematopoietic cell | 8.87e-11 | 32 |
hematopoietic oligopotent progenitor cell | 8.87e-11 | 32 |
hematopoietic stem cell | 8.87e-11 | 32 |
hematopoietic multipotent progenitor cell | 8.87e-11 | 32 |
myeloid cell | 1.04e-10 | 16 |
megakaryocyte progenitor cell | 8.00e-08 | 6 |
megakaryocyte | 8.00e-08 | 6 |
granulocyte monocyte progenitor cell | 1.94e-07 | 7 |
connective tissue cell | 2.20e-07 | 46 |
mesenchymal cell | 2.20e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.65e-12 | 48 |
immune system | 3.65e-12 | 48 |
hematopoietic system | 1.03e-11 | 45 |
blood island | 1.03e-11 | 45 |
bone marrow | 1.04e-10 | 16 |
bone element | 2.84e-10 | 22 |
skeletal element | 2.84e-10 | 22 |
skeletal system | 2.84e-10 | 22 |
spleen | 1.28e-07 | 6 |
cavity lining | 1.28e-07 | 6 |
serous membrane | 1.28e-07 | 6 |
gastrointestinal system mesentery | 1.28e-07 | 6 |
stomach region | 1.28e-07 | 6 |
mesentery | 1.28e-07 | 6 |
gastrointestinal system serosa | 1.28e-07 | 6 |
mesentery of stomach | 1.28e-07 | 6 |
gut mesentery | 1.28e-07 | 6 |
dorsal mesentery | 1.28e-07 | 6 |
dorsal mesogastrium | 1.28e-07 | 6 |
peritoneal cavity | 1.28e-07 | 6 |
spleen primordium | 1.28e-07 | 6 |
connective tissue | 2.20e-07 | 46 |
musculoskeletal system | 2.70e-07 | 32 |