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FFCP PHASE1:Mm9::chr12:77356440..77356459,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108156
|EntrezGene=108156
|HGNC=
|HGNC=
|MCL_coexpression_id=179
|TSSclassifier=NA
|UniProt=Q8BXX7
|UniProt=Q8BXX7
|association_with_transcript=56bp_to_ENSMUST00000172157_5end
|association_with_transcript=56bp_to_ENSMUST00000172157_5end
|cluster_id=chr12:77356440..77356459,+
|description=CAGE_peak_4_at_Mthfd1_5end
|description=CAGE_peak_4_at_Mthfd1_5end
|id=chr12:77356440..77356459,+
|id=chr12:77356440..77356459,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005177!1.59e-20!85;UBERON:0009569!3.90e-19!66;UBERON:0001041!1.87e-18!92;UBERON:0000466!1.35e-17!79;UBERON:0000077!9.43e-16!97;UBERON:0003104!4.33e-15!131;UBERON:0009142!4.33e-15!131;UBERON:0004921!5.77e-14!126;UBERON:0004185!5.77e-14!126;UBERON:0005172!1.05e-13!49;UBERON:0005173!1.05e-13!49;UBERON:0002417!1.05e-13!49;UBERON:0000916!1.05e-13!49;UBERON:0002100!1.54e-13!98;UBERON:0001007!2.21e-13!128;UBERON:0001555!2.21e-13!128;UBERON:0007026!2.21e-13!128;UBERON:0002107!2.94e-13!22;UBERON:0007499!2.94e-13!22;UBERON:0006925!2.94e-13!22;UBERON:0009497!2.94e-13!22;UBERON:0000015!2.94e-13!22;UBERON:0002423!2.94e-13!22;UBERON:0006235!2.94e-13!22;UBERON:0008835!2.94e-13!22;UBERON:0003894!2.94e-13!22;UBERON:0004161!2.94e-13!22;UBERON:0008836!2.94e-13!22;UBERON:0004119!9.24e-13!130;UBERON:0000925!9.24e-13!130;UBERON:0006595!9.24e-13!130;UBERON:0005911!3.58e-12!69;UBERON:0009854!9.35e-12!23;UBERON:0009856!9.35e-12!23;UBERON:0002365!4.00e-10!25;UBERON:0002330!4.00e-10!25;UBERON:0005057!8.14e-09!51;UBERON:0000926!3.41e-08!193;UBERON:0004120!3.41e-08!193;UBERON:0006603!3.41e-08!193;UBERON:0003929!3.61e-07!55;UBERON:0000464!4.40e-07!57;UBERON:0000949!4.68e-07!72;UBERON:0001048!6.92e-07!147;UBERON:0002048!8.48e-07!14;UBERON:0000117!8.48e-07!14;UBERON:0000171!8.48e-07!14;UBERON:0000170!8.48e-07!14;UBERON:0005597!8.48e-07!14;UBERON:0000118!8.48e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.45e-25,79;UBERON:0009569,6.99e-21,66;UBERON:0002100,9.78e-20,90;UBERON:0001041,1.35e-15,80;UBERON:0002107,6.70e-15,22;UBERON:0007499,6.70e-15,22;UBERON:0006925,6.70e-15,22;UBERON:0009497,6.70e-15,22;UBERON:0000015,6.70e-15,22;UBERON:0002423,6.70e-15,22;UBERON:0006235,6.70e-15,22;UBERON:0008835,6.70e-15,22;UBERON:0003894,6.70e-15,22;UBERON:0004161,6.70e-15,22;UBERON:0008836,6.70e-15,22;UBERON:0005172,1.15e-14,49;UBERON:0005173,1.15e-14,49;UBERON:0002417,1.15e-14,49;UBERON:0000916,1.15e-14,49;UBERON:0009854,1.03e-13,23;UBERON:0009856,1.03e-13,23;UBERON:0005911,2.05e-13,69;UBERON:0002365,1.18e-11,25;UBERON:0002330,1.18e-11,25;UBERON:0004921,3.10e-11,114;UBERON:0001007,1.48e-10,116;UBERON:0001555,1.48e-10,116;UBERON:0007026,1.48e-10,116;UBERON:0004119,6.51e-10,118;UBERON:0000925,6.51e-10,118;UBERON:0006595,6.51e-10,118;UBERON:0003104,2.62e-08,61;UBERON:0009142,2.62e-08,61;UBERON:0003929,9.24e-08,55;UBERON:0002048,1.54e-07,14;UBERON:0000117,1.54e-07,14;UBERON:0000171,1.54e-07,14;UBERON:0000170,1.54e-07,14;UBERON:0005597,1.54e-07,14;UBERON:0000118,1.54e-07,14;UBERON:0000949,2.26e-07,72
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|phase1_expression=0.160148847104794,0,0,0.90739263392049,2.00358291978539,0.839396359559449,1.16806320297763,0.645616617207881,3.37892933164,3.04283884218592,1.88339765048055,3.11111420081812,0.513602189793617,0.961624426608971,2.99798785634096,4.04950534779652,5.59649502502517,0.473193248037357,0.137114433605739,0.42438965179803,5.3577272795174,1.29078236561151,1.30599894569468,0.95995453676044,0.22940928106717,0.57423196411502,0,0.430942465371778,1.14014051673824,2.52030129759931,1.33038306393183,1.27006134691926,1.23012957516914,0,2.3108129580102,2.1610503896604,3.26670970019791,0.418531630736908,0,0,0,0,0,1.38486499773135,1.92616169317078,0.550640256485045,0,2.39827672018491,1.75748946187577,1.74986909166855,2.37976916763116,2.87505128729943,0.167782606057736,0,1.00828139742739,0.514518872071894,0,0,0.606949382578793,0,0.633831403506179,0.677689064138264,0,0,0,0,0.599200221036809,0.768436610643109,0.207379224616955,1.62007125998029,0.841299845405528,1.42825492201902,1.54607978666129,0.244981598429908,0.575072826109418,0.919218786610021,1.10115880999389,1.27687338085188,1.0752457327937,0.395658863190582,0.365950574409639,0.52091337055676,1.3959149950069,0.56276261003168,1.68078072554491,0.294628585473668,0.854230084794618,0.559198337475902,0.227178579999552,0.302286240427142,2.89864488701678,3.44169550792555,4.0798280022465,12.4131734076698,10.3964226791627,16.1289679355041,6.88177658645584,0.681721290312231,1.29893002301434,0.70667914902068,0.563373679106722,0,0,0,1.5154372870785,1.26679932737549,0.505524445014783,10.7332846935916,0.258937883647172,0.593768556259299,1.21439728736295,0,0.691846491768175,0.904335843315735,1.05829836422134,0.628332956648377,0.494389935468748,0.433798070759735,1.76922110389975,0.323533699894818,2.20841518460394,1.45462575940567,0,1.75668478206928,0.628340120440365,0.766371165625774,1.07833612055328,0.599902730993408,1.01656181658452,1.3481157546434,0.915001205637253,2.76439574648302,0.695297280769106,0.767146371990992,1.66230435647648,1.46017136760982,1.01839363850316,1.7416975885413,1.51633655060205,0.420883711772948,2.08192708740326,0.459804208866946,0.540186389416048,0.90422890701429,0.816437989815934,1.0249097622788,0.562210347358373,0.517406741478031,0.862271971731369,0.756424320671277,1.58356011747554,0.657587197282725,1.11218899690239,0.348252166522167,0.61734640922383,0.995171334092466,1.40442637462647,2.05878325691772,1.13665399758237,0.828503090142008,0.938104239924385,1.08037236876609,0.710234206755631,0.393528463494808,1.23413690309903,0.697601834251224,0.804820204198858,0.700592054203017,0.493679549740441,0.985004784474571,0.324275238183423,0.584799949701329,0.439100230582101,0.402619256281115,1.47202963994889,1.3377599609307,0,1.85115396664481,1.70630600428187,1.62565670302307,1.54640953586512,0.80673409849337,0.667134131534611,0.760902504450237,2.37264530772256,0.823494773620054,0.502670417600539,0.994782360205754,0.58489226135736,0,1.72910439899755,2.19055400579804,1.13800740571849,1.02823661348756,4.50830942692322,3.46207257337034,5.43066964069352,8.41629838683823,18.4018323031589,31.7361818156145,32.655735391006,31.5896739639809,20.1587786419261,1.66845105716094,2.75182593158484,3.14806957338795,3.65148218499305,6.27060615356284,5.34714288740982,4.60313819921297,11.8358715545776,9.33508804839477,24.4405951096503,16.7463426450827,22.4667124642484,21.2166257475574,13.9929982547091,26.0519501536218,5.35784251483154,1.32643988239339,1.95557971730431,1.86719594352707,2.34690248288502,3.1826188913945,4.76087281772027,5.26860849216057,3.94087860265477,3.98636441367795,3.34855014180723,5.07976275618788,4.14443956478149,4.05017364028232,0,0.54390568381871,0,0.551873492609465,0.481651769963376,0.703270119553219,2.62295912602681,1.00988370881749,0.631016438832513,0.780877488593277,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0.790575555893047,1.60660658210904,0.283880170416537,0.712262414669021,0.977321756121456,1.81467135269789,2.65490276679926,5.34117399540959,2.11626489875326,3.77210159511796,3.54362271456927,2.45948118355142,3.10113951801865,3.63533729477506,4.9909632973861,2.21225730555071,0,2.06271086496374,1.02131881726136,0.540183282093931,0.646793418913773,0.643011105094777,0.532020700926821,0.535106452806212,0.164549020602121,0.913394847343798,0.23467170806371,0.847328283455281,0.441056796109924,0.32977250588296,0.645857706783622,0.904693873922338,0.477489376012546,0.164140899745061,0.291480836629851,0.556275906031529,0.854354403989263,1.23832120777933,1.11116716421827,3.57900068308913,3.00727300986255,1.60144721244566,1.01987057996313,0.279902904647316,0,0.954670618015114,2.05618395827738,2.03319467126849,1.94409613479242,1.88179466413022,1.31017538247707,1.34864346384821,4.29797969771747,2.09404753587224,1.42576470620972,0.621339313086926,0.56369293868419,1.19613236835183,0.827292452285488,0.583353565032143,1.54991788173277,2.53434188236167,1.87771581833206,2.73429208172295,2.41176492179135,1.20792060413003,0.864090018773596,0.316011120628178,1.41907650703115,0.821687657318618,2.07873316764472,0.895133478337407,1.78813219303138,0.841368146639782,1.47689527174577,1.61546319917036,1.905170166375,1.31074040677893,1.07203668813728,0.865906574762965,0.584384510907845,0,0.665957860122194,1.88399098879899,1.84673078000486,0.579568782096571,1.31377732815827,0.549454872801795,0,1.50471631210609,1.12950368523413,1.84130094602871,0.572895513439397,0.515559547031063,0.685082519770642,0,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.726511433089237,0.798049746802062,1.87806966329548,1.21553358534147,1.25767897576789,1.2869045591501,1.33348036680969,0.412070114477788,0.962757628775446,1.76888048234658,1.52087579934144,1.50901073108861,1.21733959710847,1.21647789569252,1.32101578597911,2.38146845641537,0.463537303779422,0.77163688185482,0,0.883193520806384,0.685738504770831,1.06485483695602,1.66905332963125,1.59881058295561,1.2234219453993,1.26921911837515,0.914639864363863,0.789209134313529,1.22223702461276,0.561142271657738,0.949080144993393,0.394017929502254,1.22769312950907,0.464810523557898,1.35034627686799,0.749431733813838,0.701794825336225,1.07435527024149,1.14772999241306,0.220591419119515,0.927471342481686
|short_description=p4@Mthfd1
|short_description=p4@Mthfd1
}}
}}

Latest revision as of 19:19, 26 September 2015

Short description:p4@Mthfd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Mthfd1_5end
Coexpression cluster:MCL_coexpression_mm9:179
Association with transcript: 56bp_to_ENSMUST00000172157_5end
EntrezGene:Mthfd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Mthfd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.13
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.73
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G78.42
kidney, neonate N10.CNhs11206.758-6D518.40
kidney, neonate N20.CNhs11113.832-19I131.74
kidney, neonate N25.CNhs11122.1353-25F332.66
kidney, neonate N30.CNhs11203.1385-42H131.59
liver, adult pregnant day01.CNhs10466.508-5B220.16
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F411.84
liver, neonate N03.CNhs11123.1345-25G29.34
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H216.75
liver, neonate N10.CNhs11115.751-24B922.47
liver, neonate N20.CNhs11220.823-25A321.22
liver, neonate N25.CNhs11198.1368-26H113.99
liver, neonate N30.CNhs11106.1382-42D126.05
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A94.30
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element3.45e-2579
subdivision of trunk6.99e-2166
trunk9.78e-2090
foregut1.35e-1580
liver6.70e-1522
epithelial sac6.70e-1522
digestive gland6.70e-1522
epithelium of foregut-midgut junction6.70e-1522
anatomical boundary6.70e-1522
hepatobiliary system6.70e-1522
foregut-midgut junction6.70e-1522
hepatic diverticulum6.70e-1522
liver primordium6.70e-1522
septum transversum6.70e-1522
liver bud6.70e-1522
abdomen element1.15e-1449
abdominal segment element1.15e-1449
abdominal segment of trunk1.15e-1449
abdomen1.15e-1449
digestive tract diverticulum1.03e-1323
sac1.03e-1323
endo-epithelium2.05e-1369
exocrine gland1.18e-1125
exocrine system1.18e-1125
subdivision of digestive tract3.10e-11114
digestive system1.48e-10116
digestive tract1.48e-10116
primitive gut1.48e-10116
endoderm-derived structure6.51e-10118
endoderm6.51e-10118
presumptive endoderm6.51e-10118
mesenchyme2.62e-0861
entire embryonic mesenchyme2.62e-0861
gut epithelium9.24e-0855
lung1.54e-0714
respiratory tube1.54e-0714
respiration organ1.54e-0714
pair of lungs1.54e-0714
lung primordium1.54e-0714
lung bud1.54e-0714
endocrine system2.26e-0772
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