FFCP PHASE1:Mm9::chr6:148392838..148392851,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:148392838..148392851,- to FFCP PHASE1:Mm9::chr6:148392838..148392851,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=387314 | |EntrezGene=387314 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3553 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UV71 | |UniProt=Q3UV71 | ||
|association_with_transcript=22bp_to_NM_198967,uc009eti.2,uc009etj.2_5end | |||
|cluster_id=chr6:148392838..148392851,- | |||
|description=CAGE_peak_1_at_Tmtc1_5end | |||
|id=chr6:148392838..148392851,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!9.93e-10!122;UBERON:0000025!1.38e-08!114;UBERON:0000468!1.47e-07!333;UBERON:0002048!2.40e-07!14;UBERON:0000117!2.40e-07!14;UBERON:0000171!2.40e-07!14;UBERON:0000170!2.40e-07!14;UBERON:0005597!2.40e-07!14;UBERON:0000118!2.40e-07!14;UBERON:0003103!3.95e-07!43;UBERON:0002346!4.02e-07!71;UBERON:0003075!4.02e-07!71;UBERON:0007284!4.02e-07!71;UBERON:0001049!6.21e-07!52;UBERON:0005068!6.21e-07!52;UBERON:0006241!6.21e-07!52;UBERON:0007135!6.21e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.56e-10,92;UBERON:0004111,6.38e-09,122;UBERON:0000025,8.51e-08,114;UBERON:0002048,1.44e-07,14;UBERON:0000117,1.44e-07,14;UBERON:0000171,1.44e-07,14;UBERON:0000170,1.44e-07,14;UBERON:0005597,1.44e-07,14;UBERON:0000118,1.44e-07,14;UBERON:0000073,3.84e-07,54;UBERON:0003103,4.23e-07,43;UBERON:0001049,8.11e-07,52;UBERON:0005068,8.11e-07,52;UBERON:0006241,8.11e-07,52;UBERON:0007135,8.11e-07,52 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,36.7723931843578,1.09012578190223,0.878744730937887,1.55543919259427,4.05960622713551,0,0,0,0,0.257259436035947,6.5902691185914,10.8291139378263,1.61853168687678,1.05798195854407,0.633831403506179,5.08266798103698,14.2287167377782,0,0,0,3.89480143673926,0.768436610643109,3.52544681848824,4.3201900266141,3.15487442027073,8.2838785477103,4.8591079009355,1.10241719293459,1.0543001812006,0.919218786610021,3.30347642998166,4.59674417106676,3.5329502648936,1.18697658957174,2.28719109006024,1.56274011167028,3.07101298901519,8.4414391504752,7.94550888439413,5.00868595305235,5.12538050876771,4.84638559145781,0.227178579999552,0.151143120213571,4.92769630792852,0.860423876981386,0,0,0,0,5.75822122540183,0,0,0,1.12674735821344,0,0,0,0,0,0.505524445014783,1.37020655662872,2.84831672011889,5.78924342352817,2.77576522825817,2.43572382649713,4.15107895060905,3.61734337326294,5.40908052824242,2.26199864393416,8.15743393523434,9.10975948595443,1.76922110389975,5.66183974815932,11.7046004784009,3.39412677194655,0,4.39171195517321,4.60782754989601,1.27728527604296,0,0,0,4.19413790333504,4.11750542536764,2.1361239859187,4.69325664519146,4.34716277461562,3.32460871295296,5.67844420737152,9.57290020192973,3.35898820647251,4.29628689337247,3.57751155007006,0.390361328888111,1.83921683546778,2.16074555766419,3.0140963567143,5.8511389270142,1.7935920839879,2.62364828767241,3.62184719034622,1.29340795759705,2.45837904218165,1.58356011747554,0.657587197282725,1.39023624612799,1.74126083261083,3.49829631893504,1.59227413454795,0,0,0,1.65700618028402,0.469052119962192,3.42117916775928,2.84093682702252,3.14822770795846,1.85120535464854,3.72054311600653,4.29237442239391,15.880086561935,6.58239399653922,3.447516745661,12.1603214318784,17.1053985287639,10.5384055339704,29.3912057085214,4.20579897128254,1.64647379806855,0,0.528901133327089,2.98603550749328,1.62565670302307,2.83508414908605,2.01683524623343,2.66853652613844,1.90225626112559,2.84717436926707,1.64698954724011,2.26201687920243,1.1937388322469,2.14460495831032,0.898819408654221,2.37751854862164,2.19055400579804,1.89667900953082,2.28497025219458,1.1270773567308,3.46207257337034,2.71533482034676,3.7873342740772,2.97211724484009,4.57591458736767,3.1399745568275,3.57851775373222,0.296452627087149,0.500535317148282,0.786235980452812,0,0,0.241177159752417,0.50925170356284,0,0.486405680325106,0.274561413188081,0,1.11642284300551,0.624075346229121,0,0.538192240565737,0,17.1820466854942,2.27389694124582,3.09633455239849,3.73439188705414,4.69380496577004,10.2178817039508,7.37935286746643,13.0739544064725,9.77337893458384,9.7444463445461,18.8156627015835,13.4367918066905,10.0157289482219,19.3829738499225,0,0,0,0.275936746304732,3.69266356971921,5.97779601620236,0,11.8661335786055,0.631016438832513,0,0.215423397732799,0.955875191810208,0.222798674082394,1.13230612315533,0.404810701674894,0.876767573733936,0,12.8528526568723,11.3552068166615,3.20518086601059,7.16702621155735,13.3625799607754,3.98235415019888,1.45668381692989,2.11626489875326,1.69744571780308,1.47650946440386,3.07435147943927,4.65170927702798,0.727067458955011,1.06949213515416,1.26414703174326,0,4.12542172992747,6.46835250932197,2.16073312837572,2.58717367565509,8.14480733120051,9.3990323830405,20.334045206636,18.1003922662333,7.30715877875038,6.8054795338476,1.69465656691056,1.98475558249466,4.61681508236144,2.74489525383039,3.49814964583304,2.74556391207214,2.62625439592098,2.04036585640896,4.26478194624172,0.854354403989263,2.68302928352189,0.925972636848558,0,1.23024804948923,0,0.169978429993855,0,0,3.81868247206045,3.63786392618306,2.23651413839534,1.94409613479242,1.25452977608681,2.18362563746178,2.56242258131159,2.64491058321075,2.6175594198403,2.59229946583586,3.10669656543463,0,2.69129782879162,1.32366792365678,2.72231663681667,2.71235629303235,2.87225413334323,2.34714477291508,2.99470085141085,2.62148361064277,2.41584120826006,3.74439008135225,0.316011120628178,1.01362607645082,0.308132871494482,0,0.179026695667481,0.79472541912506,0.120195449519969,0,0.302899349844443,0,0.100826185136841,0,0.192423683280659,0.467507608726276,15.1909357022192,0.443971906748129,0,0,9.65947970160952,11.2609485270709,6.22715522508701,5.14484109789758,3.51100472824754,1.12950368523413,2.30162618253588,1.14579102687879,3.43706364687375,2.05524755931193,0,3.37511250115903,4.95353323546643,3.62513927187364,1.55328093525546,0.62272408550506,1.59609949360412,1.19513524027894,2.67417388775123,0.209613162627982,1.65459157605013,3.11145418922261,3.29656091582231,1.28367683836726,3.03236654116557,4.30914809813408,3.01802146217722,3.183811253976,4.73786127796033,3.79074095107048,5.23923060411381,4.1718357340148,4.24400285020151,4.94503080963968,5.00476328456951,1.71434626192708,3.3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| |phase1_expression=1.44133962394315,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,36.7723931843578,1.09012578190223,0.878744730937887,1.55543919259427,4.05960622713551,0,0,0,0,0.257259436035947,6.5902691185914,10.8291139378263,1.61853168687678,1.05798195854407,0.633831403506179,5.08266798103698,14.2287167377782,0,0,0,3.89480143673926,0.768436610643109,3.52544681848824,4.3201900266141,3.15487442027073,8.2838785477103,4.8591079009355,1.10241719293459,1.0543001812006,0.919218786610021,3.30347642998166,4.59674417106676,3.5329502648936,1.18697658957174,2.28719109006024,1.56274011167028,3.07101298901519,8.4414391504752,7.94550888439413,5.00868595305235,5.12538050876771,4.84638559145781,0.227178579999552,0.151143120213571,4.92769630792852,0.860423876981386,0,0,0,0,5.75822122540183,0,0,0,1.12674735821344,0,0,0,0,0,0.505524445014783,1.37020655662872,2.84831672011889,5.78924342352817,2.77576522825817,2.43572382649713,4.15107895060905,3.61734337326294,5.40908052824242,2.26199864393416,8.15743393523434,9.10975948595443,1.76922110389975,5.66183974815932,11.7046004784009,3.39412677194655,0,4.39171195517321,4.60782754989601,1.27728527604296,0,0,0,4.19413790333504,4.11750542536764,2.1361239859187,4.69325664519146,4.34716277461562,3.32460871295296,5.67844420737152,9.57290020192973,3.35898820647251,4.29628689337247,3.57751155007006,0.390361328888111,1.83921683546778,2.16074555766419,3.0140963567143,5.8511389270142,1.7935920839879,2.62364828767241,3.62184719034622,1.29340795759705,2.45837904218165,1.58356011747554,0.657587197282725,1.39023624612799,1.74126083261083,3.49829631893504,1.59227413454795,0,0,0,1.65700618028402,0.469052119962192,3.42117916775928,2.84093682702252,3.14822770795846,1.85120535464854,3.72054311600653,4.29237442239391,15.880086561935,6.58239399653922,3.447516745661,12.1603214318784,17.1053985287639,10.5384055339704,29.3912057085214,4.20579897128254,1.64647379806855,0,0.528901133327089,2.98603550749328,1.62565670302307,2.83508414908605,2.01683524623343,2.66853652613844,1.90225626112559,2.84717436926707,1.64698954724011,2.26201687920243,1.1937388322469,2.14460495831032,0.898819408654221,2.37751854862164,2.19055400579804,1.89667900953082,2.28497025219458,1.1270773567308,3.46207257337034,2.71533482034676,3.7873342740772,2.97211724484009,4.57591458736767,3.1399745568275,3.57851775373222,0.296452627087149,0.500535317148282,0.786235980452812,0,0,0.241177159752417,0.50925170356284,0,0.486405680325106,0.274561413188081,0,1.11642284300551,0.624075346229121,0,0.538192240565737,0,17.1820466854942,2.27389694124582,3.09633455239849,3.73439188705414,4.69380496577004,10.2178817039508,7.37935286746643,13.0739544064725,9.77337893458384,9.7444463445461,18.8156627015835,13.4367918066905,10.0157289482219,19.3829738499225,0,0,0,0.275936746304732,3.69266356971921,5.97779601620236,0,11.8661335786055,0.631016438832513,0,0.215423397732799,0.955875191810208,0.222798674082394,1.13230612315533,0.404810701674894,0.876767573733936,0,12.8528526568723,11.3552068166615,3.20518086601059,7.16702621155735,13.3625799607754,3.98235415019888,1.45668381692989,2.11626489875326,1.69744571780308,1.47650946440386,3.07435147943927,4.65170927702798,0.727067458955011,1.06949213515416,1.26414703174326,0,4.12542172992747,6.46835250932197,2.16073312837572,2.58717367565509,8.14480733120051,9.3990323830405,20.334045206636,18.1003922662333,7.30715877875038,6.8054795338476,1.69465656691056,1.98475558249466,4.61681508236144,2.74489525383039,3.49814964583304,2.74556391207214,2.62625439592098,2.04036585640896,4.26478194624172,0.854354403989263,2.68302928352189,0.925972636848558,0,1.23024804948923,0,0.169978429993855,0,0,3.81868247206045,3.63786392618306,2.23651413839534,1.94409613479242,1.25452977608681,2.18362563746178,2.56242258131159,2.64491058321075,2.6175594198403,2.59229946583586,3.10669656543463,0,2.69129782879162,1.32366792365678,2.72231663681667,2.71235629303235,2.87225413334323,2.34714477291508,2.99470085141085,2.62148361064277,2.41584120826006,3.74439008135225,0.316011120628178,1.01362607645082,0.308132871494482,0,0.179026695667481,0.79472541912506,0.120195449519969,0,0.302899349844443,0,0.100826185136841,0,0.192423683280659,0.467507608726276,15.1909357022192,0.443971906748129,0,0,9.65947970160952,11.2609485270709,6.22715522508701,5.14484109789758,3.51100472824754,1.12950368523413,2.30162618253588,1.14579102687879,3.43706364687375,2.05524755931193,0,3.37511250115903,4.95353323546643,3.62513927187364,1.55328093525546,0.62272408550506,1.59609949360412,1.19513524027894,2.67417388775123,0.209613162627982,1.65459157605013,3.11145418922261,3.29656091582231,1.28367683836726,3.03236654116557,4.30914809813408,3.01802146217722,3.183811253976,4.73786127796033,3.79074095107048,5.23923060411381,4.1718357340148,4.24400285020151,4.94503080963968,5.00476328456951,1.71434626192708,3.3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| ||
|short_description=p1@Tmtc1 | |||
}} | }} |
Latest revision as of 22:51, 26 September 2015
Short description: | p1@Tmtc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmtc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3553 |
Association with transcript: | 22bp_to_NM_198967, uc009eti.2, uc009etj.2_5end |
EntrezGene: | Tmtc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.56e-10 | 92 |
anatomical conduit | 6.38e-09 | 122 |
tube | 8.51e-08 | 114 |
lung | 1.44e-07 | 14 |
respiratory tube | 1.44e-07 | 14 |
respiration organ | 1.44e-07 | 14 |
pair of lungs | 1.44e-07 | 14 |
lung primordium | 1.44e-07 | 14 |
lung bud | 1.44e-07 | 14 |
regional part of nervous system | 3.84e-07 | 54 |
compound organ | 4.23e-07 | 43 |
neural tube | 8.11e-07 | 52 |
neural rod | 8.11e-07 | 52 |
future spinal cord | 8.11e-07 | 52 |
neural keel | 8.11e-07 | 52 |