FFCP PHASE1:Mm9::chr11:115835873..115835891,+: Difference between revisions
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{{FFCP|EntrezGene=192897|HGNC=|UniProt=A2A864|association_with_transcript=-131bp_to_ENSMUST00000021107_5end|description=CAGE_peak_6_at_Itgb4_5end|id=chr11:115835873..115835891,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,5.72e-19,2;CL:0002604,5.72e-19,2;CL:0000333,7.59e-15,10;CL:0000095,7.59e-15,10;CL:0000243,7.59e-15,10;CL:0000123,7.59e-15,10;CL:0000125,7.59e-15,10;CL:0000030,7.59e-15,10;CL:0000339,7.59e-15,10;CL:0000128,3.68e-14,6;CL:0000126,3.68e-14,6;CL:0000127,3.68e-14,6;CL:0002453,8.85e-11,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!6.65e-11!17;UBERON:0005181!6.65e-11!17;UBERON:0002224!6.65e-11!17;UBERON:0000915!6.65e-11!17;UBERON:0008947!6.65e-11!17;UBERON:0003258!6.65e-11!17;UBERON:0002048!8.17e-10!14;UBERON:0000117!8.17e-10!14;UBERON:0000171!8.17e-10!14;UBERON:0000170!8.17e-10!14;UBERON:0005597!8.17e-10!14;UBERON:0000118!8.17e-10!14;UBERON:0000065!1.17e-09!41;UBERON:0001004!2.87e-09!42;UBERON:0005153!6.36e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.92e-10,14;UBERON:0000117,2.92e-10,14;UBERON:0000171,2.92e-10,14;UBERON:0000170,2.92e-10,14;UBERON:0005597,2.92e-10,14;UBERON:0000118,2.92e-10,14;UBERON:0005153,1.66e-08,17;UBERON:0005178,1.66e-08,17;UBERON:0005181,1.66e-08,17;UBERON:0002224,1.66e-08,17;UBERON:0000915,1.66e-08,17;UBERON:0008947,1.66e-08,17;UBERON:0003258,1.66e-08,17;UBERON:0005157,2.85e-07,20|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,2.63623419281366,2.3331587888914,2.37976916763116,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.589257170947335,0,0.186399445825301,0.530083353332288,4.98772296704784,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0.162964976442026,0,0,0.335012514883631,2.14239276797412,1.56106918286239,0.472905432318573,1.10732344824387,0.478364305972461,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.180938774784468,0.358117032009409,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,1.01362607645082,0.718976700153791,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618105171716683,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p6@Itgb4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192897 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2A864 | |||
|association_with_transcript=-131bp_to_ENSMUST00000021107_5end | |||
|cluster_id=chr11:115835873..115835891,+ | |||
|description=CAGE_peak_6_at_Itgb4_5end | |||
|id=chr11:115835873..115835891,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.72e-19,2;CL:0002604,5.72e-19,2;CL:0000333,7.59e-15,10;CL:0000095,7.59e-15,10;CL:0000243,7.59e-15,10;CL:0000123,7.59e-15,10;CL:0000125,7.59e-15,10;CL:0000030,7.59e-15,10;CL:0000339,7.59e-15,10;CL:0000128,3.68e-14,6;CL:0000126,3.68e-14,6;CL:0000127,3.68e-14,6;CL:0002453,8.85e-11,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!6.65e-11!17;UBERON:0005181!6.65e-11!17;UBERON:0002224!6.65e-11!17;UBERON:0000915!6.65e-11!17;UBERON:0008947!6.65e-11!17;UBERON:0003258!6.65e-11!17;UBERON:0002048!8.17e-10!14;UBERON:0000117!8.17e-10!14;UBERON:0000171!8.17e-10!14;UBERON:0000170!8.17e-10!14;UBERON:0005597!8.17e-10!14;UBERON:0000118!8.17e-10!14;UBERON:0000065!1.17e-09!41;UBERON:0001004!2.87e-09!42;UBERON:0005153!6.36e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.92e-10,14;UBERON:0000117,2.92e-10,14;UBERON:0000171,2.92e-10,14;UBERON:0000170,2.92e-10,14;UBERON:0005597,2.92e-10,14;UBERON:0000118,2.92e-10,14;UBERON:0005153,1.66e-08,17;UBERON:0005178,1.66e-08,17;UBERON:0005181,1.66e-08,17;UBERON:0002224,1.66e-08,17;UBERON:0000915,1.66e-08,17;UBERON:0008947,1.66e-08,17;UBERON:0003258,1.66e-08,17;UBERON:0005157,2.85e-07,20 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,2.63623419281366,2.3331587888914,2.37976916763116,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.589257170947335,0,0.186399445825301,0.530083353332288,4.98772296704784,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0.162964976442026,0,0,0.335012514883631,2.14239276797412,1.56106918286239,0.472905432318573,1.10732344824387,0.478364305972461,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.180938774784468,0.358117032009409,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,1.01362607645082,0.718976700153791,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618105171716683,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Itgb4 | |||
}} |
Latest revision as of 23:35, 26 September 2015
Short description: | p6@Itgb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Itgb4_5end |
Coexpression cluster: | NA |
Association with transcript: | -131bp_to_ENSMUST00000021107_5end |
EntrezGene: | Itgb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.72e-19 | 2 |
astrocyte of the hippocampus | 5.72e-19 | 2 |
migratory neural crest cell | 7.59e-15 | 10 |
neuron associated cell | 7.59e-15 | 10 |
glial cell (sensu Vertebrata) | 7.59e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 7.59e-15 | 10 |
glial cell | 7.59e-15 | 10 |
glioblast | 7.59e-15 | 10 |
glioblast (sensu Vertebrata) | 7.59e-15 | 10 |
oligodendrocyte | 3.68e-14 | 6 |
macroglial cell | 3.68e-14 | 6 |
astrocyte | 3.68e-14 | 6 |
oligodendrocyte precursor cell | 8.85e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
lung | 2.92e-10 | 14 |
respiratory tube | 2.92e-10 | 14 |
respiration organ | 2.92e-10 | 14 |
pair of lungs | 2.92e-10 | 14 |
lung primordium | 2.92e-10 | 14 |
lung bud | 2.92e-10 | 14 |
epithelial bud | 1.66e-08 | 17 |
thoracic cavity element | 1.66e-08 | 17 |
thoracic segment organ | 1.66e-08 | 17 |
thoracic cavity | 1.66e-08 | 17 |
thoracic segment of trunk | 1.66e-08 | 17 |
respiratory primordium | 1.66e-08 | 17 |
endoderm of foregut | 1.66e-08 | 17 |
epithelial fold | 2.85e-07 | 20 |