Personal tools

FFCP PHASE1:Mm9::chr1:197002966..197002977,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:197002966..197002977,-
|DHSsupport=NA
|short_description=p3@Cr2
|DPIdataset=NA
|description=CAGE_peak_3_at_Cr2_5end
|association_with_transcript=-57bp_to_ENSMUST00000082321,NM_007758,uc007eez.1,uc007efa.1,uc011wzi.1_5end
|EntrezGene=12902
|EntrezGene=12902
|HGNC=
|HGNC=
|MCL_coexpression_id=18
|TSSclassifier=NA
|UniProt=Q9DC83
|UniProt=Q9DC83
|association_with_transcript=-57bp_to_ENSMUST00000082321,NM_007758,uc007eez.1,uc007efa.1,uc011wzi.1_5end
|cluster_id=chr1:197002966..197002977,-
|description=CAGE_peak_3_at_Cr2_5end
|id=chr1:197002966..197002977,-
|ontology_enrichment_celltype=CL:0000553!9.48e-17!6;CL:0000556!9.48e-17!6;CL:0000050!6.69e-11!9;CL:0002027!6.52e-09!3;CL:0002006!6.52e-09!3;CL:0002024!6.52e-09!3;CL:0000414!9.00e-09!11;CL:0000839!2.68e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000553,9.69e-37,6;CL:0000556,9.69e-37,6;CL:0000050,1.35e-24,9;CL:0000839,4.26e-17,13;CL:0000763,6.38e-14,16;CL:0002031,1.23e-12,25;CL:0002027,2.12e-12,3;CL:0002006,2.12e-12,3;CL:0002024,2.12e-12,3;CL:0000049,9.62e-12,19;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000988,7.55e-10,32;CL:0002032,7.55e-10,32;CL:0000037,7.55e-10,32;CL:0000837,7.55e-10,32;CL:0002320,8.52e-07,46;CL:0000134,8.52e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!8.90e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.19e-14,48;UBERON:0002405,2.19e-14,48;UBERON:0002371,6.38e-14,16;UBERON:0002106,1.66e-13,6;UBERON:0004457,1.66e-13,6;UBERON:0000042,1.66e-13,6;UBERON:0004854,1.66e-13,6;UBERON:0009034,1.66e-13,6;UBERON:0002095,1.66e-13,6;UBERON:0004782,1.66e-13,6;UBERON:0003281,1.66e-13,6;UBERON:0009664,1.66e-13,6;UBERON:0002296,1.66e-13,6;UBERON:0005602,1.66e-13,6;UBERON:0001179,1.66e-13,6;UBERON:0006293,1.66e-13,6;UBERON:0002390,4.66e-12,45;UBERON:0003061,4.66e-12,45;UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0001474,3.73e-10,22;UBERON:0004765,3.73e-10,22;UBERON:0001434,3.73e-10,22;UBERON:0003887,2.36e-08,10;UBERON:0002204,5.41e-07,32;UBERON:0002384,8.52e-07,46
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,2.42970320867791,0.699561878128147,16.5617636813075,17.2764186343231,15.2780274647291,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4092172119261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,19.6792791571851,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95525554313773,0,0,0,1.6403307326523,2.74533807847827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,2.42970320867791,0.699561878128147,16.5617636813075,17.2764186343231,15.2780274647291,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4092172119261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,19.6792791571851,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95525554313773,0,0,0,1.6403307326523,2.74533807847827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p3@Cr2
}}
}}

Latest revision as of 00:54, 27 September 2015

Short description:p3@Cr2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cr2_5end
Coexpression cluster:MCL_coexpression_mm9:18
Association with transcript: -57bp_to_ENSMUST00000082321, NM_007758, uc007eez.1, uc007efa.1, uc011wzi.1_5end
EntrezGene:Cr2
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data