FFCP PHASE1:Mm9::chr15:78075450..78075481,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:78075450..78075481,+ to FFCP PHASE1:Mm9::chr15:78075450..78075481,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17972 | |EntrezGene=17972 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=P97369 | |UniProt=P97369 | ||
|association_with_transcript=209bp_to_NM_008677,uc007wow.2_5end | |||
|cluster_id=chr15:78075450..78075481,+ | |||
|description=CAGE_peak_3_at_Ncf4_5end | |||
|id=chr15:78075450..78075481,+ | |||
|ontology_enrichment_celltype=CL:0000049!2.23e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,8.09e-13,19;CL:0000763,4.65e-10,16;CL:0000988,1.10e-08,32;CL:0002032,1.10e-08,32;CL:0000037,1.10e-08,32;CL:0000837,1.10e-08,32;CL:0000557,5.96e-08,7;CL:0000839,2.92e-07,13;CL:0000553,5.86e-07,6;CL:0000556,5.86e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.19e-11!70;UBERON:0002193!5.61e-11!48;UBERON:0002371!9.47e-11!16;UBERON:0001474!3.47e-10!22;UBERON:0004765!3.47e-10!22;UBERON:0001434!3.47e-10!22;UBERON:0002390!1.91e-09!45;UBERON:0003061!1.91e-09!45;UBERON:0002204!1.55e-08!32;UBERON:0000926!4.18e-07!193;UBERON:0004120!4.18e-07!193;UBERON:0006603!4.18e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,7.38e-17,22;UBERON:0004765,7.38e-17,22;UBERON:0001434,7.38e-17,22;UBERON:0002371,2.13e-16,16;UBERON:0002204,4.98e-14,32;UBERON:0002193,1.01e-12,48;UBERON:0002405,1.01e-12,48;UBERON:0002390,1.62e-10,45;UBERON:0003061,1.62e-10,45 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,0,0,1.00727563147134,0.934450562382103,0.516493293766305,0.281577444303333,0,0,0.0797721589953364,0.684802919724823,0.34968160967599,7.99463428357591,10.9336644390506,2.79824751251259,54.5749546069751,51.966370336575,45.8340823941873,0.510259740906419,12.8085327049142,12.015190300391,9.5995453676044,11.0116454912242,0.57423196411502,1.29228598847722,1.50829862880122,0,0.252030129759931,5.09980174507201,0,0,0,0,0,0,118.025919867808,120.325643056665,102.610653818864,66.4701581475046,71.7197759206368,96.1310499001684,0,0,0,0,0,0,0,0.139986421625363,0,38.5899993932794,0,0.336093799142464,0.514518872071894,0.286533439938757,0,0,0,0,0,0,22.9474427906757,20.7661936139065,23.4458437932213,4.19440154725767,3.45796474789399,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.569486723196412,0.186399445825301,0.151452386666368,0,0.289864488701678,0,0,0,0,0,3.93244376368905,0,0,0,0,0,0,0,0,0,0,1.1418387971906,41.4300613835475,1.1875371125186,0,1.52232739156071,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0,2.16899035379867,10.6153266233985,1.45590164952668,7.28777010919299,6.78825354389311,1.86391761218122,0,0,0.766371165625774,13.539109069169,25.1959147017231,16.9003402007176,0,0,0,0.173824320192276,0,0.20778804455956,0,0.203678727700633,8.08645308965605,0,0.420883711772948,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,35.812872552975,28.5656176897334,23.017243451043,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0,0.56748166682099,0.438599962275997,1.53685080703735,0.671032093801859,0,0.102904612379284,0.660837565967596,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,1.42358718463353,0.164698954724011,0.754005626400808,1.1937388322469,0.38992817423824,2.69645822596266,1.72910439899755,0.398282546508734,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.316182685621286,0,0.31399745568275,0.370191491765402,0.296452627087149,0.83422552858047,1.17935397067922,1.57403478669398,1.82574109249653,2.41177159752417,2.03700681425136,2.87696137450811,6.80967952455149,4.66754402419738,8.62609239164127,4.09355042435354,1.5601883655728,1.26289438973556,0,0.482443521363367,5.35784251483154,0,0.162964976442026,0.339490171550376,0.938760993154008,0.335012514883631,1.19021820443007,1.36593553500459,3.94087860265477,2.87904096543407,0.797273843287435,6.22680595919804,6.73471429276993,3.18227928879325,30.1582567878545,70.7077388964322,2.95058563811422,2.48343071674259,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,1.32745138339963,0,0.302323556964751,0,0.885905678642318,0.307435147943927,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,3.16255825724996,3.09406629744561,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.938686832254841,0,0.220528398054962,0.98931751764888,0.322928853391811,0.422190474497091,0.358117032009409,0.328281799490123,1.1659233465194,0.370850604021019,14.3531539870196,5.57244543500701,6.11141940320049,11.8672127912955,17.6335553760122,18.9885883761414,4.41943917984024,6.29781535456461,5.8043988997858,0.954670618015114,0,0,0.648032044930808,0.209088296014469,0.436725127492355,0.539457385539283,0.41326727862668,0,0.648074866458964,5.59205381778233,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,0.13020438484395,0,0,0,2.21207784439725,1.62180172232131,1.43795340030758,0.909445760844565,0.537080087002444,0.39736270956253,0.480781798079875,0.147689527174577,0.908698049533329,0.533447646584999,0.806609481094724,1.36441033035653,1.05833025804362,0.116876902181569,0,0,0,0,0.965947970160952,2.43987218086537,1.28206136987086,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.564656282491984,0.169229215783353,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.949080144993393,0.492522411877817,0,0.464810523557898,0.578719832943424,0.499621155875892,0.935726433781634,0.859484216193193,0.57386499620653,2.64709702943419,1.15933917810211 | |phase1_expression=0,1.04692622291808,0.909998478779072,0,0,1.00727563147134,0.934450562382103,0.516493293766305,0.281577444303333,0,0,0.0797721589953364,0.684802919724823,0.34968160967599,7.99463428357591,10.9336644390506,2.79824751251259,54.5749546069751,51.966370336575,45.8340823941873,0.510259740906419,12.8085327049142,12.015190300391,9.5995453676044,11.0116454912242,0.57423196411502,1.29228598847722,1.50829862880122,0,0.252030129759931,5.09980174507201,0,0,0,0,0,0,118.025919867808,120.325643056665,102.610653818864,66.4701581475046,71.7197759206368,96.1310499001684,0,0,0,0,0,0,0,0.139986421625363,0,38.5899993932794,0,0.336093799142464,0.514518872071894,0.286533439938757,0,0,0,0,0,0,22.9474427906757,20.7661936139065,23.4458437932213,4.19440154725767,3.45796474789399,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.569486723196412,0.186399445825301,0.151452386666368,0,0.289864488701678,0,0,0,0,0,3.93244376368905,0,0,0,0,0,0,0,0,0,0,1.1418387971906,41.4300613835475,1.1875371125186,0,1.52232739156071,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0,2.16899035379867,10.6153266233985,1.45590164952668,7.28777010919299,6.78825354389311,1.86391761218122,0,0,0.766371165625774,13.539109069169,25.1959147017231,16.9003402007176,0,0,0,0.173824320192276,0,0.20778804455956,0,0.203678727700633,8.08645308965605,0,0.420883711772948,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,35.812872552975,28.5656176897334,23.017243451043,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0,0.56748166682099,0.438599962275997,1.53685080703735,0.671032093801859,0,0.102904612379284,0.660837565967596,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,1.42358718463353,0.164698954724011,0.754005626400808,1.1937388322469,0.38992817423824,2.69645822596266,1.72910439899755,0.398282546508734,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.316182685621286,0,0.31399745568275,0.370191491765402,0.296452627087149,0.83422552858047,1.17935397067922,1.57403478669398,1.82574109249653,2.41177159752417,2.03700681425136,2.87696137450811,6.80967952455149,4.66754402419738,8.62609239164127,4.09355042435354,1.5601883655728,1.26289438973556,0,0.482443521363367,5.35784251483154,0,0.162964976442026,0.339490171550376,0.938760993154008,0.335012514883631,1.19021820443007,1.36593553500459,3.94087860265477,2.87904096543407,0.797273843287435,6.22680595919804,6.73471429276993,3.18227928879325,30.1582567878545,70.7077388964322,2.95058563811422,2.48343071674259,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,1.32745138339963,0,0.302323556964751,0,0.885905678642318,0.307435147943927,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,3.16255825724996,3.09406629744561,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.938686832254841,0,0.220528398054962,0.98931751764888,0.322928853391811,0.422190474497091,0.358117032009409,0.328281799490123,1.1659233465194,0.370850604021019,14.3531539870196,5.57244543500701,6.11141940320049,11.8672127912955,17.6335553760122,18.9885883761414,4.41943917984024,6.29781535456461,5.8043988997858,0.954670618015114,0,0,0.648032044930808,0.209088296014469,0.436725127492355,0.539457385539283,0.41326727862668,0,0.648074866458964,5.59205381778233,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,0.13020438484395,0,0,0,2.21207784439725,1.62180172232131,1.43795340030758,0.909445760844565,0.537080087002444,0.39736270956253,0.480781798079875,0.147689527174577,0.908698049533329,0.533447646584999,0.806609481094724,1.36441033035653,1.05833025804362,0.116876902181569,0,0,0,0,0.965947970160952,2.43987218086537,1.28206136987086,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.564656282491984,0.169229215783353,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.949080144993393,0.492522411877817,0,0.464810523557898,0.578719832943424,0.499621155875892,0.935726433781634,0.859484216193193,0.57386499620653,2.64709702943419,1.15933917810211 | ||
|short_description=p3@Ncf4 | |||
}} | }} |
Latest revision as of 01:49, 27 September 2015
Short description: | p3@Ncf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ncf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 209bp_to_NM_008677, uc007wow.2_5end |
EntrezGene: | Ncf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 8.09e-13 | 19 |
myeloid cell | 4.65e-10 | 16 |
hematopoietic cell | 1.10e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.10e-08 | 32 |
hematopoietic stem cell | 1.10e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.10e-08 | 32 |
granulocyte monocyte progenitor cell | 5.96e-08 | 7 |
myeloid lineage restricted progenitor cell | 2.92e-07 | 13 |
megakaryocyte progenitor cell | 5.86e-07 | 6 |
megakaryocyte | 5.86e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone element | 7.38e-17 | 22 |
skeletal element | 7.38e-17 | 22 |
skeletal system | 7.38e-17 | 22 |
bone marrow | 2.13e-16 | 16 |
musculoskeletal system | 4.98e-14 | 32 |
hemolymphoid system | 1.01e-12 | 48 |
immune system | 1.01e-12 | 48 |
hematopoietic system | 1.62e-10 | 45 |
blood island | 1.62e-10 | 45 |