FFCP PHASE1:Mm9::chr7:86293928..86293948,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17304 | |EntrezGene=17304 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1078 | |MCL_coexpression_id=1078 | ||
|TSSclassifier=NA | |||
|UniProt=P21956,E9QKW0,Q3TDU5 | |UniProt=P21956,E9QKW0,Q3TDU5 | ||
|association_with_transcript=0bp_to_ENSMUST00000032825,ENSMUST00000107409,NM_001045489,NM_008594,uc009hya.1,uc009hyb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000032825,ENSMUST00000107409,NM_001045489,NM_008594,uc009hya.1,uc009hyb.1_5end | ||
|cluster_id=chr7:86293928..86293948,- | |||
|description=CAGE_peak_2_at_Mfge8_5end | |description=CAGE_peak_2_at_Mfge8_5end | ||
|id=chr7:86293928..86293948,- | |id=chr7:86293928..86293948,- | ||
|ontology_enrichment_celltype=CL:0000333!7.09e-07!10;CL:0000095!7.09e-07!10;CL:0000243!7.09e-07!10;CL:0000123!7.09e-07!10;CL:0000125!7.09e-07!10;CL:0000030!7.09e-07!10;CL:0000339!7.09e-07!10 | |ontology_enrichment_celltype=CL:0000333!7.09e-07!10;CL:0000095!7.09e-07!10;CL:0000243!7.09e-07!10;CL:0000123!7.09e-07!10;CL:0000125!7.09e-07!10;CL:0000030!7.09e-07!10;CL:0000339!7.09e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,7.09e-07,10;CL:0000095,7.09e-07,10;CL:0000243,7.09e-07,10;CL:0000123,7.09e-07,10;CL:0000125,7.09e-07,10;CL:0000030,7.09e-07,10;CL:0000339,7.09e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.38e-09!23;UBERON:0001009!2.38e-09!23;UBERON:0003103!7.62e-08!43;UBERON:0005157!2.63e-07!27;UBERON:0004872!3.02e-07!33;UBERON:0007100!3.94e-07!18;UBERON:0000948!3.94e-07!18;UBERON:0005498!3.94e-07!18;UBERON:0004140!3.94e-07!18;UBERON:0009881!3.94e-07!18;UBERON:0004141!3.94e-07!18;UBERON:0003084!3.94e-07!18;UBERON:0007005!3.94e-07!18;UBERON:0004139!3.94e-07!18;UBERON:0004291!3.94e-07!18;UBERON:0005178!8.82e-07!17;UBERON:0005181!8.82e-07!17;UBERON:0002224!8.82e-07!17;UBERON:0000915!8.82e-07!17;UBERON:0008947!8.82e-07!17;UBERON:0003258!8.82e-07!17 | |ontology_enrichment_uberon=UBERON:0004535!2.38e-09!23;UBERON:0001009!2.38e-09!23;UBERON:0003103!7.62e-08!43;UBERON:0005157!2.63e-07!27;UBERON:0004872!3.02e-07!33;UBERON:0007100!3.94e-07!18;UBERON:0000948!3.94e-07!18;UBERON:0005498!3.94e-07!18;UBERON:0004140!3.94e-07!18;UBERON:0009881!3.94e-07!18;UBERON:0004141!3.94e-07!18;UBERON:0003084!3.94e-07!18;UBERON:0007005!3.94e-07!18;UBERON:0004139!3.94e-07!18;UBERON:0004291!3.94e-07!18;UBERON:0005178!8.82e-07!17;UBERON:0005181!8.82e-07!17;UBERON:0002224!8.82e-07!17;UBERON:0000915!8.82e-07!17;UBERON:0008947!8.82e-07!17;UBERON:0003258!8.82e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.38e-09,23;UBERON:0001009,2.38e-09,23;UBERON:0003103,7.61e-08,43;UBERON:0004872,3.01e-07,33;UBERON:0007100,3.94e-07,18;UBERON:0000948,3.94e-07,18;UBERON:0005498,3.94e-07,18;UBERON:0004140,3.94e-07,18;UBERON:0009881,3.94e-07,18;UBERON:0004141,3.94e-07,18;UBERON:0003084,3.94e-07,18;UBERON:0007005,3.94e-07,18;UBERON:0004139,3.94e-07,18;UBERON:0004291,3.94e-07,18;UBERON:0005178,8.81e-07,17;UBERON:0005181,8.81e-07,17;UBERON:0002224,8.81e-07,17;UBERON:0000915,8.81e-07,17;UBERON:0008947,8.81e-07,17;UBERON:0003258,8.81e-07,17 | |||
|phase1_expression=16.1750335575842,17.7977457896074,21.3849642513082,0.60492842261366,3.00537437967808,17.4594442788365,23.5948767001481,2.45334314538995,2.67498572088167,1.17032263160997,0.68487187290202,0.319088635981346,5.9920255475922,3.3219752919219,2.33176833270964,1.61980213911861,0,4.10100814965709,1.64537320326887,4.66828616977833,16.4133549991565,18.3688259721638,15.1495877700583,24.6388331101846,20.6468352960453,24.1177424928308,25.8457197695445,29.5195588779668,3.80046838912748,5.04060259519861,33.2595765982957,2.54012269383853,1.84519436275371,0,23.9746844393558,24.4364928676984,24.5003227514843,0.418531630736908,0.7813353445238,1.0470474879476,0,0,0,39.7833944802824,42.1728033873181,54.5133853920194,108.752396864377,91.1345153670267,140.818843132796,122.10197661865,80.6321788562088,67.5637052515366,1.8456086666351,5.07753499407941,8.4023449785616,318.229922376466,322.063586491163,193.377034604041,12.3413041124355,8.46385566835253,7.60597684207415,142.314703469035,103.158196348892,91.339821304062,103.830968069532,95.2043354027774,60.8188224352362,62.2433654620918,14.5165457231869,14.3106294631592,14.302097371894,33.421165175245,34.0137553065485,14.4539143073646,13.801747826626,21.1420320920305,15.4162233399144,14.8117312178818,11.8277030607307,9.49581271657396,13.174220678747,13.022834263919,13.1216009530649,16.3201156909187,12.835052813252,20.9186295686304,21.0710087582672,11.9295645328192,25.9740843132821,47.4589397470613,51.306014500197,13.7667820317022,7.47968467078526,3.2382191498269,7.14754059192436,6.2723764193627,10.3928870897496,73.1146083859868,76.8966573624492,85.8615166060127,9.01397886570755,41.0644727725817,12.7402619853323,0,70.792570410667,68.9138834092268,75.3231423072027,8.10705546005326,9.06282592765101,23.8991843894368,23.7674897669606,25.2706346999077,36.8984795609694,38.8864412625766,38.0987411119684,34.1813128416717,144.856251092343,30.7996630239412,4.42305275974937,24.7503280419536,12.367125033782,7.75800405016355,9.31958806090611,5.5628351432194,6.49284791121711,10.4737392635522,20.8478316640301,12.5979573508616,21.601938602421,7.04016005202667,10.0650132620098,9.80103946480342,6.08385120672968,5.62574006126727,8.3115217823824,6.97637431191358,42.8743721809832,32.7190332704545,82.387619249378,11.5743020737561,14.9638509407109,19.0818746679783,17.6460887209242,15.2211866014072,23.5406287063594,19.601399203582,22.3010104452155,17.3331258395141,14.8741915123661,9.45530400839096,11.0849208223288,17.0972671293508,11.6779844674751,21.9398864908965,25.7227670509929,27.4667288209521,6.31991868581911,8.23513302767089,7.38825098428541,29.2047339275058,27.2050229578072,27.0093092191522,28.17262353464,29.711398993858,28.8479501099397,29.9968788728026,32.4610815693539,43.5534727029542,28.4688540350321,30.0426459264744,28.2930145315037,27.6317976233878,21.515911298523,31.2700955711666,7.14985825118033,13.9950272835827,2.31293148088659,10.5780226665418,15.3567540385368,17.1855137176724,17.5259747398047,17.1430995929841,19.7916459021935,21.8759470029443,10.9141684155238,41.9982334546228,33.1762475616356,31.8330355265841,31.5841821132975,7.19055526923377,12.752144942607,12.7450414882795,23.8981555200883,16.9087798662399,23.6686244913469,14.255592949172,18.2315337937568,28.4751428754693,21.7533687707445,14.1705742060418,16.4848664233444,16.2884256376777,2.96452627087149,7.50802975722423,10.0245087507734,8.54476027062444,11.1573066763677,14.2294524253926,19.0969388836065,15.8232875597946,20.9154442539796,14.0026320725922,14.3768206527355,21.9563159124417,20.2824487524464,8.84026072814891,6.45830688678884,5.30687873499704,38.0591571743206,18.380666941737,24.7706764191879,21.3878808076737,26.7546883048892,20.7707759227852,23.8043640886014,36.4899921494084,36.7289885767425,52.2656667571109,45.4446090673838,43.9153683438178,49.0425348499143,56.268483788208,9.04747703635634,16.86107619838,47.2093702098275,59.878273948127,4.97706828962155,7.61875962849321,35.0820783106085,19.4402613947367,22.4010835785542,21.4741309363151,17.2338718186239,24.1358485932078,18.2694912747563,9.90767857760913,24.6934528021686,20.4579100537918,14.2303600060748,8.35435422696698,21.0071326108238,32.4079398674405,34.8578093016653,20.951205617512,5.30980553359851,18.9368896200886,17.5347663039556,18.6719028958339,21.8523400731772,19.3684143204674,29.7192537143454,25.8108947929029,26.3808060004694,17.0659849285341,13.7044191147498,16.5016869197099,18.0432991049508,11.7039711120352,16.4285528404098,16.0752776273694,10.995094485821,15.161349496176,14.1512157717824,36.5357938937519,29.0992917999001,139.17367055753,8.60060752414351,22.4245304000413,26.8030948315203,19.722326451507,21.009532544552,15.2651036762907,13.4081184849731,5.7481843623258,3.07567585436135,27.862227175035,15.1859512443164,4.1441060541032,4.92099219795691,4.34678529092393,24.3069154891213,28.9699506309972,26.9489948918626,16.2294005062569,16.9239756565907,18.2987520414164,22.5731162317565,21.7451827855047,24.8933322670642,23.4663962709588,29.2593233267689,24.6050585464988,10.628427809927,13.6694648879124,6.20062232552609,31.9965408534115,38.5518282765037,33.0567020184881,41.7186229833071,30.0741903373585,34.2683136845602,26.6918988930098,21.391306262845,13.7702948870823,17.5698303817298,6.00421129193539,18.8534450219853,13.4551353885924,10.133824192268,8.77230808770659,10.9274745129696,7.45211787023807,8.12292399460175,7.57248374611107,7.31585343887998,7.4611377001262,6.1398464866044,8.178006539428,10.5189211963412,16.3245876202952,19.7567498502918,19.4679068842562,17.4600001018642,26.6601639764423,61.3721694725365,20.1466786693992,24.6523635940926,8.02515366456581,8.471277639256,7.36520378411483,8.59343270159095,11.3423100346834,8.22099023724771,5.2877572817279,4.72515750162264,8.10578165803597,4.98456649882625,8.80192529978094,2.59468368960442,7.18244772121856,10.0732827394939,10.6966955510049,4.82110274044359,6.25067928730048,12.4458167568905,14.2164189494837,11.8740107548972,16.172621552883,12.1670063947315,15.0901073108861,17.9791694342174,18.3111935877926,17.6326889693733,19.0517476513229,18.0779548473975,13.8894638733868,16.4834360321323,17.6638704161277,13.0290315906458,17.2151531974557,18.3595866259437,10.4649419975277,14.2105164427149,14.384483341585,15.3659497213129,15.7841826862706,18.4693594830372,8.97827634652382,12.931216975535,15.2681947682123,18.8246279858057,17.0430525304563,18.3261280432084,20.7342779688495,20.8199131516413,24.9250422696026,41.1269913948013,33.3093042870468,23.650519233283 | |phase1_expression=16.1750335575842,17.7977457896074,21.3849642513082,0.60492842261366,3.00537437967808,17.4594442788365,23.5948767001481,2.45334314538995,2.67498572088167,1.17032263160997,0.68487187290202,0.319088635981346,5.9920255475922,3.3219752919219,2.33176833270964,1.61980213911861,0,4.10100814965709,1.64537320326887,4.66828616977833,16.4133549991565,18.3688259721638,15.1495877700583,24.6388331101846,20.6468352960453,24.1177424928308,25.8457197695445,29.5195588779668,3.80046838912748,5.04060259519861,33.2595765982957,2.54012269383853,1.84519436275371,0,23.9746844393558,24.4364928676984,24.5003227514843,0.418531630736908,0.7813353445238,1.0470474879476,0,0,0,39.7833944802824,42.1728033873181,54.5133853920194,108.752396864377,91.1345153670267,140.818843132796,122.10197661865,80.6321788562088,67.5637052515366,1.8456086666351,5.07753499407941,8.4023449785616,318.229922376466,322.063586491163,193.377034604041,12.3413041124355,8.46385566835253,7.60597684207415,142.314703469035,103.158196348892,91.339821304062,103.830968069532,95.2043354027774,60.8188224352362,62.2433654620918,14.5165457231869,14.3106294631592,14.302097371894,33.421165175245,34.0137553065485,14.4539143073646,13.801747826626,21.1420320920305,15.4162233399144,14.8117312178818,11.8277030607307,9.49581271657396,13.174220678747,13.022834263919,13.1216009530649,16.3201156909187,12.835052813252,20.9186295686304,21.0710087582672,11.9295645328192,25.9740843132821,47.4589397470613,51.306014500197,13.7667820317022,7.47968467078526,3.2382191498269,7.14754059192436,6.2723764193627,10.3928870897496,73.1146083859868,76.8966573624492,85.8615166060127,9.01397886570755,41.0644727725817,12.7402619853323,0,70.792570410667,68.9138834092268,75.3231423072027,8.10705546005326,9.06282592765101,23.8991843894368,23.7674897669606,25.2706346999077,36.8984795609694,38.8864412625766,38.0987411119684,34.1813128416717,144.856251092343,30.7996630239412,4.42305275974937,24.7503280419536,12.367125033782,7.75800405016355,9.31958806090611,5.5628351432194,6.49284791121711,10.4737392635522,20.8478316640301,12.5979573508616,21.601938602421,7.04016005202667,10.0650132620098,9.80103946480342,6.08385120672968,5.62574006126727,8.3115217823824,6.97637431191358,42.8743721809832,32.7190332704545,82.387619249378,11.5743020737561,14.9638509407109,19.0818746679783,17.6460887209242,15.2211866014072,23.5406287063594,19.601399203582,22.3010104452155,17.3331258395141,14.8741915123661,9.45530400839096,11.0849208223288,17.0972671293508,11.6779844674751,21.9398864908965,25.7227670509929,27.4667288209521,6.31991868581911,8.23513302767089,7.38825098428541,29.2047339275058,27.2050229578072,27.0093092191522,28.17262353464,29.711398993858,28.8479501099397,29.9968788728026,32.4610815693539,43.5534727029542,28.4688540350321,30.0426459264744,28.2930145315037,27.6317976233878,21.515911298523,31.2700955711666,7.14985825118033,13.9950272835827,2.31293148088659,10.5780226665418,15.3567540385368,17.1855137176724,17.5259747398047,17.1430995929841,19.7916459021935,21.8759470029443,10.9141684155238,41.9982334546228,33.1762475616356,31.8330355265841,31.5841821132975,7.19055526923377,12.752144942607,12.7450414882795,23.8981555200883,16.9087798662399,23.6686244913469,14.255592949172,18.2315337937568,28.4751428754693,21.7533687707445,14.1705742060418,16.4848664233444,16.2884256376777,2.96452627087149,7.50802975722423,10.0245087507734,8.54476027062444,11.1573066763677,14.2294524253926,19.0969388836065,15.8232875597946,20.9154442539796,14.0026320725922,14.3768206527355,21.9563159124417,20.2824487524464,8.84026072814891,6.45830688678884,5.30687873499704,38.0591571743206,18.380666941737,24.7706764191879,21.3878808076737,26.7546883048892,20.7707759227852,23.8043640886014,36.4899921494084,36.7289885767425,52.2656667571109,45.4446090673838,43.9153683438178,49.0425348499143,56.268483788208,9.04747703635634,16.86107619838,47.2093702098275,59.878273948127,4.97706828962155,7.61875962849321,35.0820783106085,19.4402613947367,22.4010835785542,21.4741309363151,17.2338718186239,24.1358485932078,18.2694912747563,9.90767857760913,24.6934528021686,20.4579100537918,14.2303600060748,8.35435422696698,21.0071326108238,32.4079398674405,34.8578093016653,20.951205617512,5.30980553359851,18.9368896200886,17.5347663039556,18.6719028958339,21.8523400731772,19.3684143204674,29.7192537143454,25.8108947929029,26.3808060004694,17.0659849285341,13.7044191147498,16.5016869197099,18.0432991049508,11.7039711120352,16.4285528404098,16.0752776273694,10.995094485821,15.161349496176,14.1512157717824,36.5357938937519,29.0992917999001,139.17367055753,8.60060752414351,22.4245304000413,26.8030948315203,19.722326451507,21.009532544552,15.2651036762907,13.4081184849731,5.7481843623258,3.07567585436135,27.862227175035,15.1859512443164,4.1441060541032,4.92099219795691,4.34678529092393,24.3069154891213,28.9699506309972,26.9489948918626,16.2294005062569,16.9239756565907,18.2987520414164,22.5731162317565,21.7451827855047,24.8933322670642,23.4663962709588,29.2593233267689,24.6050585464988,10.628427809927,13.6694648879124,6.20062232552609,31.9965408534115,38.5518282765037,33.0567020184881,41.7186229833071,30.0741903373585,34.2683136845602,26.6918988930098,21.391306262845,13.7702948870823,17.5698303817298,6.00421129193539,18.8534450219853,13.4551353885924,10.133824192268,8.77230808770659,10.9274745129696,7.45211787023807,8.12292399460175,7.57248374611107,7.31585343887998,7.4611377001262,6.1398464866044,8.178006539428,10.5189211963412,16.3245876202952,19.7567498502918,19.4679068842562,17.4600001018642,26.6601639764423,61.3721694725365,20.1466786693992,24.6523635940926,8.02515366456581,8.471277639256,7.36520378411483,8.59343270159095,11.3423100346834,8.22099023724771,5.2877572817279,4.72515750162264,8.10578165803597,4.98456649882625,8.80192529978094,2.59468368960442,7.18244772121856,10.0732827394939,10.6966955510049,4.82110274044359,6.25067928730048,12.4458167568905,14.2164189494837,11.8740107548972,16.172621552883,12.1670063947315,15.0901073108861,17.9791694342174,18.3111935877926,17.6326889693733,19.0517476513229,18.0779548473975,13.8894638733868,16.4834360321323,17.6638704161277,13.0290315906458,17.2151531974557,18.3595866259437,10.4649419975277,14.2105164427149,14.384483341585,15.3659497213129,15.7841826862706,18.4693594830372,8.97827634652382,12.931216975535,15.2681947682123,18.8246279858057,17.0430525304563,18.3261280432084,20.7342779688495,20.8199131516413,24.9250422696026,41.1269913948013,33.3093042870468,23.650519233283 | ||
|short_description=p2@Mfge8 | |short_description=p2@Mfge8 | ||
}} | }} |
Latest revision as of 02:48, 27 September 2015
Short description: | p2@Mfge8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mfge8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1078 |
Association with transcript: | 0bp_to_ENSMUST00000032825, ENSMUST00000107409, NM_001045489, NM_008594, uc009hya.1, uc009hyb.1_5end |
EntrezGene: | Mfge8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 7.09e-07 | 10 |
neuron associated cell | 7.09e-07 | 10 |
glial cell (sensu Vertebrata) | 7.09e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 7.09e-07 | 10 |
glial cell | 7.09e-07 | 10 |
glioblast | 7.09e-07 | 10 |
glioblast (sensu Vertebrata) | 7.09e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 2.38e-09 | 23 |
circulatory system | 2.38e-09 | 23 |
compound organ | 7.61e-08 | 43 |
splanchnic layer of lateral plate mesoderm | 3.01e-07 | 33 |
primary circulatory organ | 3.94e-07 | 18 |
heart | 3.94e-07 | 18 |
primitive heart tube | 3.94e-07 | 18 |
primary heart field | 3.94e-07 | 18 |
anterior lateral plate mesoderm | 3.94e-07 | 18 |
heart tube | 3.94e-07 | 18 |
heart primordium | 3.94e-07 | 18 |
cardiac mesoderm | 3.94e-07 | 18 |
cardiogenic plate | 3.94e-07 | 18 |
heart rudiment | 3.94e-07 | 18 |
thoracic cavity element | 8.81e-07 | 17 |
thoracic segment organ | 8.81e-07 | 17 |
thoracic cavity | 8.81e-07 | 17 |
thoracic segment of trunk | 8.81e-07 | 17 |
respiratory primordium | 8.81e-07 | 17 |
endoderm of foregut | 8.81e-07 | 17 |