FFCP PHASE1:Mm9::chr1:43245945..43245960,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:43245945..43245960,+ to FFCP PHASE1:Mm9::chr1:43245945..43245960,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2147 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z102 | |UniProt=D3Z102 | ||
|association_with_transcript=-5bp_to_uc007avm.2_5end | |||
|cluster_id=chr1:43245945..43245960,+ | |||
|description=CAGE_peak_1_at_uc007avm.2_5end | |||
|id=chr1:43245945..43245960,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.31e-35!115;CL:0000004!3.31e-35!115;CL:0000255!3.31e-35!115;CL:0002371!8.10e-34!118;CL:0000144!2.36e-32!121;CL:0000012!2.36e-32!121;CL:0002321!3.79e-25!70;CL:0000220!3.79e-25!70;CL:0000055!3.27e-24!50;CL:0000723!3.30e-22!91;CL:0000048!3.30e-22!91;CL:0000034!5.79e-22!97;CL:0000221!9.39e-21!44;CL:0000133!9.39e-21!44;CL:0002319!2.95e-20!43;CL:0000393!3.98e-19!39;CL:0000211!3.98e-19!39;CL:0000540!1.47e-15!33;CL:0000047!1.47e-15!33;CL:0000031!1.47e-15!33;CL:0000404!1.47e-15!33;CL:0000117!2.47e-10!23;CL:0000337!2.47e-10!23;CL:0000063!2.81e-10!66;CL:0000219!5.03e-10!54;CL:0002320!5.20e-07!46;CL:0000134!5.20e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.13e-37,70;CL:0000221,1.06e-32,44;CL:0000133,1.06e-32,44;CL:0002319,6.87e-32,43;CL:0000393,4.73e-30,39;CL:0000211,4.73e-30,39;CL:0000034,1.19e-29,97;CL:0000723,1.41e-29,91;CL:0000048,1.41e-29,91;CL:0000540,3.01e-24,33;CL:0000047,3.01e-24,33;CL:0000031,3.01e-24,33;CL:0000404,3.01e-24,33;CL:0000117,9.03e-16,23;CL:0000337,9.03e-16,23;CL:0000219,7.83e-11,54;CL:0000107,4.35e-09,9;CL:0000333,3.34e-08,10;CL:0000095,3.34e-08,10;CL:0000243,3.34e-08,10;CL:0000123,3.34e-08,10;CL:0000125,3.34e-08,10;CL:0000030,3.34e-08,10;CL:0000339,3.34e-08,10;CL:0000680,8.33e-07,6;CL:0000187,8.33e-07,6;CL:0000056,8.33e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.62e-07!11;UBERON:0002384!5.20e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.37e-12,75;UBERON:0000010,3.23e-11,11;UBERON:0001017,6.49e-11,73;UBERON:0002410,4.35e-09,9;UBERON:0004121,7.51e-08,95;UBERON:0000924,7.51e-08,95;UBERON:0006601,7.51e-08,95 | |||
|phase1_expression=73.82861851531,60.0237701139701,50.049916332849,35.0858485115923,44.0788242352786,70.1735356591699,124.982762718606,177.544569732167,1.267098499365,307.092658534455,0.68487187290202,236.843540057154,0.684802919724823,202.553072404817,0,0.607425802169478,0.699561878128147,0.157731082679119,0.822686601634433,0,86.6591126639401,109.021464418572,130.599894569468,157.272551605919,151.868944066467,80.3924749761028,100.367545105064,94.3763999164194,134.1565341362,77.3732498362987,111.308716348963,1.27006134691926,0,0,0,0.498703936075477,0,0,0.7813353445238,0,0,0,0,110.411509364581,121.0440558761,118.204108392123,228.458272549627,60.3929683173837,66.564913368545,47.4408953741251,89.4513234186066,86.2515386189829,1.00669563634642,0,0.336093799142464,153.326623877424,167.622062364173,117.573237039257,109.655521785902,102.095258999502,96.9762047364454,172.133022291119,141.397872581671,98.0890691836725,123.608295320872,147.779863908789,121.937244980991,83.7595905600989,97.8829940192029,140.271169926627,127.246601617586,110.261279979868,98.286500723468,115.508823659702,93.6410251848169,123.175317405743,52.8556228797066,45.0736303440713,43.1634358450044,108.410528514219,94.2322729104819,111.996374669703,52.2072208132582,50.6486349028512,43.8530971119445,98.9952047191523,86.4196102450555,106.806882457897,164.325839533009,175.023733207315,0.289864488701678,1.72084775396277,99.2758147213316,79.3363691707591,0.649776417447669,0,87.6373181622132,113.506594836986,192.501429410726,143.102527676688,107.181842450054,83.4122103193066,33.1246811618639,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,86.0946453081712,0.776813650941515,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.746441823660558,0.758168275301024,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0.205782136407943,0,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0.658650345873152,0.268412837520744,0,0.102904612379284,0,91.7643466322499,0.639864751605702,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.795825888164603,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0.509235257325564,0.234690248288502,25.1259386162724,0.476087281772027,0.390267295715598,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.144649058581512,120.633027151418,90.8322491977245,0.491764273019036,0.275936746304732,0,0,291.148462988976,0,130.304894618914,123.378643197738,127.530651457817,116.13883580494,110.953739693032,95.9629439374142,144.922231199612,128.008065765155,117.795757828064,0.321321316421807,0.141940085208269,0,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,33.9597176812889,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0.441056796109924,0,0.322928853391811,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0.376736914009382,0,0.457556346413045,0.169978429993855,0.139951452323658,0,0,0,0.203319467126849,0.216010681643603,0,0.655087691238533,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0.576060012515731,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0.480781798079875,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0,0.0962118416403295,0.116876902181569,0.226730383615211,69.4816034060822,73.8345039895985,1.84673078000486,0.19318959403219,0.375364950902364,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0.231867835620421 | |phase1_expression=73.82861851531,60.0237701139701,50.049916332849,35.0858485115923,44.0788242352786,70.1735356591699,124.982762718606,177.544569732167,1.267098499365,307.092658534455,0.68487187290202,236.843540057154,0.684802919724823,202.553072404817,0,0.607425802169478,0.699561878128147,0.157731082679119,0.822686601634433,0,86.6591126639401,109.021464418572,130.599894569468,157.272551605919,151.868944066467,80.3924749761028,100.367545105064,94.3763999164194,134.1565341362,77.3732498362987,111.308716348963,1.27006134691926,0,0,0,0.498703936075477,0,0,0.7813353445238,0,0,0,0,110.411509364581,121.0440558761,118.204108392123,228.458272549627,60.3929683173837,66.564913368545,47.4408953741251,89.4513234186066,86.2515386189829,1.00669563634642,0,0.336093799142464,153.326623877424,167.622062364173,117.573237039257,109.655521785902,102.095258999502,96.9762047364454,172.133022291119,141.397872581671,98.0890691836725,123.608295320872,147.779863908789,121.937244980991,83.7595905600989,97.8829940192029,140.271169926627,127.246601617586,110.261279979868,98.286500723468,115.508823659702,93.6410251848169,123.175317405743,52.8556228797066,45.0736303440713,43.1634358450044,108.410528514219,94.2322729104819,111.996374669703,52.2072208132582,50.6486349028512,43.8530971119445,98.9952047191523,86.4196102450555,106.806882457897,164.325839533009,175.023733207315,0.289864488701678,1.72084775396277,99.2758147213316,79.3363691707591,0.649776417447669,0,87.6373181622132,113.506594836986,192.501429410726,143.102527676688,107.181842450054,83.4122103193066,33.1246811618639,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,86.0946453081712,0.776813650941515,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.746441823660558,0.758168275301024,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0.205782136407943,0,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0.658650345873152,0.268412837520744,0,0.102904612379284,0,91.7643466322499,0.639864751605702,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.795825888164603,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0.509235257325564,0.234690248288502,25.1259386162724,0.476087281772027,0.390267295715598,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.144649058581512,120.633027151418,90.8322491977245,0.491764273019036,0.275936746304732,0,0,291.148462988976,0,130.304894618914,123.378643197738,127.530651457817,116.13883580494,110.953739693032,95.9629439374142,144.922231199612,128.008065765155,117.795757828064,0.321321316421807,0.141940085208269,0,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,33.9597176812889,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0.441056796109924,0,0.322928853391811,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0.376736914009382,0,0.457556346413045,0.169978429993855,0.139951452323658,0,0,0,0.203319467126849,0.216010681643603,0,0.655087691238533,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0.576060012515731,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0.480781798079875,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0,0.0962118416403295,0.116876902181569,0.226730383615211,69.4816034060822,73.8345039895985,1.84673078000486,0.19318959403219,0.375364950902364,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0.231867835620421 | ||
|short_description=p1@uc007avm.2 | |||
}} | }} |
Latest revision as of 04:00, 27 September 2015
Short description: | p1@uc007avm.2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007avm.2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2147 |
Association with transcript: | -5bp_to_uc007avm.2_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.13e-37 | 70 |
ectodermal cell | 1.06e-32 | 44 |
neurectodermal cell | 1.06e-32 | 44 |
neural cell | 6.87e-32 | 43 |
electrically responsive cell | 4.73e-30 | 39 |
electrically active cell | 4.73e-30 | 39 |
stem cell | 1.19e-29 | 97 |
somatic stem cell | 1.41e-29 | 91 |
multi fate stem cell | 1.41e-29 | 91 |
neuron | 3.01e-24 | 33 |
neuronal stem cell | 3.01e-24 | 33 |
neuroblast | 3.01e-24 | 33 |
electrically signaling cell | 3.01e-24 | 33 |
CNS neuron (sensu Vertebrata) | 9.03e-16 | 23 |
neuroblast (sensu Vertebrata) | 9.03e-16 | 23 |
motile cell | 7.83e-11 | 54 |
autonomic neuron | 4.35e-09 | 9 |
migratory neural crest cell | 3.34e-08 | 10 |
neuron associated cell | 3.34e-08 | 10 |
glial cell (sensu Vertebrata) | 3.34e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.34e-08 | 10 |
glial cell | 3.34e-08 | 10 |
glioblast | 3.34e-08 | 10 |
glioblast (sensu Vertebrata) | 3.34e-08 | 10 |
muscle precursor cell | 8.33e-07 | 6 |
muscle cell | 8.33e-07 | 6 |
myoblast | 8.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.37e-12 | 75 |
peripheral nervous system | 3.23e-11 | 11 |
central nervous system | 6.49e-11 | 73 |
autonomic nervous system | 4.35e-09 | 9 |
ectoderm-derived structure | 7.51e-08 | 95 |
ectoderm | 7.51e-08 | 95 |
presumptive ectoderm | 7.51e-08 | 95 |