FFCP PHASE1:Mm9::chr9:77765182..77765193,+: Difference between revisions
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{{FFCP|EntrezGene=68801|HGNC=|UniProt=Q8BHI7|association_with_transcript=10bp_to_NM_134255,uc009qtn.2_5end|description=CAGE_peak_2_at_Elovl5_5end|id=chr9:77765182..77765193,+|ontology_enrichment_celltype=CL:0002319!5.15e-09!43;CL:0000221!8.22e-09!44;CL:0000133!8.22e-09!44;CL:0000055!8.34e-09!50;CL:0000117!1.43e-07!23;CL:0000337!1.43e-07!23;CL:0002453!9.63e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,5.14e-09,43;CL:0000221,8.21e-09,44;CL:0000133,8.21e-09,44;CL:0000117,1.43e-07,23;CL:0000337,1.43e-07,23;CL:0002453,9.62e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.57e-10!71;UBERON:0003075!5.57e-10!71;UBERON:0007284!5.57e-10!71;UBERON:0004121!9.67e-10!102;UBERON:0000924!9.67e-10!102;UBERON:0006601!9.67e-10!102;UBERON:0001017!1.22e-08!73;UBERON:0005743!1.22e-08!73;UBERON:0000073!3.46e-08!75;UBERON:0001016!3.46e-08!75;UBERON:0002050!8.06e-08!317;UBERON:0005423!8.06e-08!317;UBERON:0004111!1.70e-07!122;UBERON:0000923!4.72e-07!314;UBERON:0005291!4.72e-07!314;UBERON:0006598!4.72e-07!314;UBERON:0002532!4.72e-07!314;UBERON:0000025!5.31e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.50e-09,92;UBERON:0001017,1.25e-08,73;UBERON:0005423,2.76e-08,304;UBERON:0001016,3.53e-08,75;UBERON:0002346,1.53e-07,64;UBERON:0003075,1.53e-07,64;UBERON:0007284,1.53e-07,64;UBERON:0004111,1.77e-07,122;UBERON:0004121,1.82e-07,95;UBERON:0000924,1.82e-07,95;UBERON:0006601,1.82e-07,95;UBERON:0000025,5.52e-07,114;UBERON:0000073,6.12e-07,54|phase1_expression=3.52327463630547,0.348975407639361,0.909998478779072,1.20985684522732,1.00179145989269,1.00727563147134,0.934450562382103,1.67860320474049,0.563154888606667,0.70219357896598,0.68487187290202,0.957265907944037,2.22560948910567,3.2345548895029,1.66554880907831,2.83465374345756,0.699561878128147,1.73504190947031,2.19383093769182,1.27316895539409,3.82694805679814,2.48227378002213,3.91799683708403,3.51983330145495,4.35877634027623,1.14846392823004,1.7230479846363,2.15471232685889,3.99049180858385,2.52030129759931,3.54768817048488,1.27006134691926,1.84519436275371,0,4.62162591602039,3.15845826181135,1.63335485009895,0,2.3440060335714,0.523523743973798,0,0,0.971020706062307,5.41356317294982,5.17022349219524,5.50640256485045,9.38869613217647,12.8634842264463,11.2039953194581,12.0546537426056,13.8586557409109,15.8127820801469,2.18117387875057,2.90144856804538,5.37750078627942,4.3734104126111,6.01720223871389,3.09403255366465,5.66486090406874,6.87688273053643,5.07065122804943,4.06613438482959,5.33576877666684,2.2497492932035,6.92206453796882,2.1314403448383,8.08920298399693,8.4528027170742,6.53244557543409,4.59020190327748,5.04779907243317,8.85518051651791,6.40518768759679,4.04219637409348,5.46319184803947,5.51531271966013,6.60695285996332,5.74593021383345,6.29786786350598,5.14356522147756,6.03818447775904,5.73004707612436,8.09630697104005,6.19038871034848,7.02871939773326,5.30331453852602,6.69146899755784,3.91438836233131,1.74170244666323,4.38315048619356,4.34796733052517,0.860423876981386,2.03991400112325,8.63525106620507,5.19821133958135,5.37632264516803,3.23022166303029,5.96506129023202,5.71529210126311,4.94675404314476,3.66192891419369,6.41632387071589,5.09610479413291,0,5.84525810730278,6.33399663687746,9.0994400102661,2.8545969929765,5.43769555659061,7.42210695324124,4.8575891494518,7.00270600117925,6.22661842591358,7.988299949289,5.52666923537813,11.0586600370114,3.21353458054686,4.916378135277,4.42305275974937,1.61766849947409,1.76673214768315,3.39412677194655,7.45567044872489,3.51336956413857,3.77004072264219,2.81002760729451,1.55759661857696,2.99951365496704,2.79554499560742,5.69204429738326,5.94750783664214,5.15182843662744,3.82413504423008,2.30143911597297,5.61027720310812,4.86723789203273,5.90668310331835,3.23458123586242,4.0435641349388,21.8859530121933,6.11566081924707,5.0578462975364,4.50155324513373,4.37043971723574,5.10273743634959,5.38077625196369,3.09215691047105,5.43277078551933,7.54487975264948,6.05139456537022,4.57472922826267,6.1374805079721,5.56094498451196,4.87553033131033,4.7329891373827,2.58744546864041,4.21327912387941,1.80143534980301,1.42081749697796,4.55676699578104,6.56672967947069,5.22179978236943,4.7348947117042,4.9191057936851,3.5481435964097,3.0229412817553,5.09719462659276,3.61972561338225,4.77223564749093,3.77585167381919,3.64809642956351,3.36259971078264,3.51280184465681,3.22095405024892,4.6263788684108,7.40913209130848,0.330418782983798,3.17340679996253,5.11891801284562,4.41249676534833,4.76809606891745,6.05050573870028,5.55945109612176,4.56541502670142,3.79623249235609,4.11747386810027,3.2673577144035,3.58121649674071,2.72949721966768,4.49409704327111,5.61958929674205,2.78797782556114,6.82804443431094,4.91268604221834,7.88954149711563,4.68398054044223,3.87904974335251,3.85747009396752,3.98390183882821,5.46157547524528,5.02395929092399,3.57851775373222,4.74324203339438,2.33583148002532,2.55526693647164,1.57403478669398,1.01430060694251,1.4470629585145,2.29163266603278,3.740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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68801 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHI7 | |||
|association_with_transcript=10bp_to_NM_134255,uc009qtn.2_5end | |||
|cluster_id=chr9:77765182..77765193,+ | |||
|description=CAGE_peak_2_at_Elovl5_5end | |||
|id=chr9:77765182..77765193,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.15e-09!43;CL:0000221!8.22e-09!44;CL:0000133!8.22e-09!44;CL:0000055!8.34e-09!50;CL:0000117!1.43e-07!23;CL:0000337!1.43e-07!23;CL:0002453!9.63e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.14e-09,43;CL:0000221,8.21e-09,44;CL:0000133,8.21e-09,44;CL:0000117,1.43e-07,23;CL:0000337,1.43e-07,23;CL:0002453,9.62e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.57e-10!71;UBERON:0003075!5.57e-10!71;UBERON:0007284!5.57e-10!71;UBERON:0004121!9.67e-10!102;UBERON:0000924!9.67e-10!102;UBERON:0006601!9.67e-10!102;UBERON:0001017!1.22e-08!73;UBERON:0005743!1.22e-08!73;UBERON:0000073!3.46e-08!75;UBERON:0001016!3.46e-08!75;UBERON:0002050!8.06e-08!317;UBERON:0005423!8.06e-08!317;UBERON:0004111!1.70e-07!122;UBERON:0000923!4.72e-07!314;UBERON:0005291!4.72e-07!314;UBERON:0006598!4.72e-07!314;UBERON:0002532!4.72e-07!314;UBERON:0000025!5.31e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.50e-09,92;UBERON:0001017,1.25e-08,73;UBERON:0005423,2.76e-08,304;UBERON:0001016,3.53e-08,75;UBERON:0002346,1.53e-07,64;UBERON:0003075,1.53e-07,64;UBERON:0007284,1.53e-07,64;UBERON:0004111,1.77e-07,122;UBERON:0004121,1.82e-07,95;UBERON:0000924,1.82e-07,95;UBERON:0006601,1.82e-07,95;UBERON:0000025,5.52e-07,114;UBERON:0000073,6.12e-07,54 | |||
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| |||
|short_description=p2@Elovl5 | |||
}} |
Latest revision as of 04:02, 27 September 2015
Short description: | p2@Elovl5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Elovl5_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_NM_134255, uc009qtn.2_5end |
EntrezGene: | Elovl5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.14e-09 | 43 |
ectodermal cell | 8.21e-09 | 44 |
neurectodermal cell | 8.21e-09 | 44 |
CNS neuron (sensu Vertebrata) | 1.43e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-07 | 23 |
oligodendrocyte precursor cell | 9.62e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.50e-09 | 92 |
central nervous system | 1.25e-08 | 73 |
developing anatomical structure | 2.76e-08 | 304 |
nervous system | 3.53e-08 | 75 |
neurectoderm | 1.53e-07 | 64 |
neural plate | 1.53e-07 | 64 |
presumptive neural plate | 1.53e-07 | 64 |
anatomical conduit | 1.77e-07 | 122 |
ectoderm-derived structure | 1.82e-07 | 95 |
ectoderm | 1.82e-07 | 95 |
presumptive ectoderm | 1.82e-07 | 95 |
tube | 5.52e-07 | 114 |
regional part of nervous system | 6.12e-07 | 54 |