FFCP PHASE1:Mm9::chr11:23670953..23671028,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19696 | |EntrezGene=19696 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=A4QPD3 | |UniProt=A4QPD3 | ||
|association_with_transcript=0bp_to_ENSMUST00000102864,NM_009044,uc007ifo.1_5end | |association_with_transcript=0bp_to_ENSMUST00000102864,NM_009044,uc007ifo.1_5end | ||
|cluster_id=chr11:23670953..23671028,- | |||
|description=CAGE_peak_1_at_Rel_5end | |description=CAGE_peak_1_at_Rel_5end | ||
|id=chr11:23670953..23671028,- | |id=chr11:23670953..23671028,- | ||
|ontology_enrichment_celltype=CL:0000988!6.36e-09!32;CL:0002032!6.36e-09!32;CL:0000037!6.36e-09!32;CL:0000566!6.36e-09!32;CL:0000837!6.36e-09!32;CL:0000838!1.44e-08!12;CL:0000084!7.00e-08!11;CL:0000827!7.00e-08!11;CL:0000542!4.64e-07!13;CL:0000051!4.64e-07!13;CL:0000791!4.95e-07!9;CL:0000789!4.95e-07!9;CL:0002420!4.95e-07!9;CL:0002419!4.95e-07!9;CL:0000790!4.95e-07!9;CL:0000063!5.53e-07!66;CL:0002031!8.33e-07!25 | |ontology_enrichment_celltype=CL:0000988!6.36e-09!32;CL:0002032!6.36e-09!32;CL:0000037!6.36e-09!32;CL:0000566!6.36e-09!32;CL:0000837!6.36e-09!32;CL:0000838!1.44e-08!12;CL:0000084!7.00e-08!11;CL:0000827!7.00e-08!11;CL:0000542!4.64e-07!13;CL:0000051!4.64e-07!13;CL:0000791!4.95e-07!9;CL:0000789!4.95e-07!9;CL:0002420!4.95e-07!9;CL:0002419!4.95e-07!9;CL:0000790!4.95e-07!9;CL:0000063!5.53e-07!66;CL:0002031!8.33e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.93e-09,32;CL:0002032,4.93e-09,32;CL:0000037,4.93e-09,32;CL:0000837,4.93e-09,32;CL:0000838,1.43e-08,12;CL:0000084,6.96e-08,11;CL:0000827,6.96e-08,11;CL:0000791,4.92e-07,9;CL:0000789,4.92e-07,9;CL:0002420,4.92e-07,9;CL:0002419,4.92e-07,9;CL:0000790,4.92e-07,9;CL:0000542,5.08e-07,13;CL:0000051,5.08e-07,13;CL:0002031,6.11e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.85e-13!48;UBERON:0002390!6.07e-12!45;UBERON:0003061!6.07e-12!45;UBERON:0002405!2.82e-10!70;UBERON:0003081!4.56e-10!88;UBERON:0004177!5.97e-08!29;UBERON:0000926!8.47e-07!193;UBERON:0004120!8.47e-07!193;UBERON:0006603!8.47e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.85e-13,48;UBERON:0002405,7.85e-13,48;UBERON:0002390,5.39e-12,45;UBERON:0003061,5.39e-12,45;UBERON:0000926,2.21e-11,120;UBERON:0004120,2.21e-11,120;UBERON:0006603,2.21e-11,120;UBERON:0003081,1.37e-09,87;UBERON:0004177,5.35e-08,29;UBERON:0005057,5.35e-08,29;UBERON:0000077,1.81e-07,35 | |||
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| ||
|short_description=p1@Rel | |short_description=p1@Rel | ||
}} | }} |
Latest revision as of 05:51, 27 September 2015
Short description: | p1@Rel |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rel_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000102864, NM_009044, uc007ifo.1_5end |
EntrezGene: | Rel |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.93e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.93e-09 | 32 |
hematopoietic stem cell | 4.93e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.93e-09 | 32 |
lymphoid lineage restricted progenitor cell | 1.43e-08 | 12 |
T cell | 6.96e-08 | 11 |
pro-T cell | 6.96e-08 | 11 |
mature alpha-beta T cell | 4.92e-07 | 9 |
alpha-beta T cell | 4.92e-07 | 9 |
immature T cell | 4.92e-07 | 9 |
mature T cell | 4.92e-07 | 9 |
immature alpha-beta T cell | 4.92e-07 | 9 |
lymphocyte | 5.08e-07 | 13 |
common lymphoid progenitor | 5.08e-07 | 13 |
hematopoietic lineage restricted progenitor cell | 6.11e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.85e-13 | 48 |
immune system | 7.85e-13 | 48 |
hematopoietic system | 5.39e-12 | 45 |
blood island | 5.39e-12 | 45 |
mesoderm | 2.21e-11 | 120 |
mesoderm-derived structure | 2.21e-11 | 120 |
presumptive mesoderm | 2.21e-11 | 120 |
lateral plate mesoderm | 1.37e-09 | 87 |
hemopoietic organ | 5.35e-08 | 29 |
immune organ | 5.35e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 1.81e-07 | 35 |