FFCP PHASE1:Mm9::chr13:22133226..22133232,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | |EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=241 | |MCL_coexpression_id=241 | ||
|TSSclassifier=NA | |||
|UniProt=P62806,B2RTM0 | |UniProt=P62806,B2RTM0 | ||
|association_with_transcript=-5bp_to_ENSMUST00000102977,NM_175656,uc007psc.1_5end | |association_with_transcript=-5bp_to_ENSMUST00000102977,NM_175656,uc007psc.1_5end | ||
|cluster_id=chr13:22133226..22133232,- | |||
|description=CAGE_peak_5_at_Hist1h4c_5end,CAGE_peak_5_at_Hist1h4d_5end,CAGE_peak_5_at_Hist1h4f_5end,CAGE_peak_5_at_Hist1h4h_5end,CAGE_peak_5_at_Hist1h4i_5end,CAGE_peak_5_at_Hist1h4j_5end,CAGE_peak_5_at_Hist1h4k_5end,CAGE_peak_5_at_Hist1h4m_5end,CAGE_peak_5_at_Hist1h4n_5end,CAGE_peak_6_at_Hist1h4a_5end,CAGE_peak_6_at_Hist1h4b_5end,CAGE_peak_6_at_Hist2h4_5end,CAGE_peak_6_at_Hist4h4_5end | |description=CAGE_peak_5_at_Hist1h4c_5end,CAGE_peak_5_at_Hist1h4d_5end,CAGE_peak_5_at_Hist1h4f_5end,CAGE_peak_5_at_Hist1h4h_5end,CAGE_peak_5_at_Hist1h4i_5end,CAGE_peak_5_at_Hist1h4j_5end,CAGE_peak_5_at_Hist1h4k_5end,CAGE_peak_5_at_Hist1h4m_5end,CAGE_peak_5_at_Hist1h4n_5end,CAGE_peak_6_at_Hist1h4a_5end,CAGE_peak_6_at_Hist1h4b_5end,CAGE_peak_6_at_Hist2h4_5end,CAGE_peak_6_at_Hist4h4_5end | ||
|id=chr13:22133226..22133232,- | |id=chr13:22133226..22133232,- |
Latest revision as of 06:51, 27 September 2015
Short description: | p5@Hist1h4c, p5@Hist1h4d, p5@Hist1h4f, p5@Hist1h4h, p5@Hist1h4i, p5@Hist1h4j, p5@Hist1h4k, p5@Hist1h4m, p5@Hist1h4n, p6@Hist1h4a, p6@Hist1h4b, p6@Hist2h4, p6@Hist4h4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Hist1h4c_5end, CAGE_peak_5_at_Hist1h4d_5end, CAGE_peak_5_at_Hist1h4f_5end, CAGE_peak_5_at_Hist1h4h_5end, CAGE_peak_5_at_Hist1h4i_5end, CAGE_peak_5_at_Hist1h4j_5end, CAGE_peak_5_at_Hist1h4k_5end, CAGE_peak_5_at_Hist1h4m_5end, CAGE_peak_5_at_Hist1h4n_5end, CAGE_peak_6_at_Hist1h4a_5end, CAGE_peak_6_at_Hist1h4b_5end, CAGE_peak_6_at_Hist2h4_5end, CAGE_peak_6_at_Hist4h4_5end |
Coexpression cluster: | MCL_coexpression_mm9:241 |
Association with transcript: | -5bp_to_ENSMUST00000102977, NM_175656, uc007psc.1_5end |
EntrezGene: | 100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.15e-09 | 19 |
stem cell | 1.48e-07 | 97 |
myeloid cell | 2.17e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.17e-08 | 45 |
blood island | 8.17e-08 | 45 |
musculoskeletal system | 1.07e-07 | 32 |
hemolymphoid system | 1.22e-07 | 48 |
immune system | 1.22e-07 | 48 |
bone element | 6.61e-07 | 22 |
skeletal element | 6.61e-07 | 22 |
skeletal system | 6.61e-07 | 22 |
bone marrow | 9.45e-07 | 16 |