FFCP PHASE1:Mm9::chr8:108160409..108160489,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:108160409..108160489,+ to FFCP PHASE1:Mm9::chr8:108160409..108160489,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13018 | |EntrezGene=13018 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=973 | |||
|TSSclassifier=NA | |||
|UniProt=Q61164 | |UniProt=Q61164 | ||
|association_with_transcript=0bp_to_ENSMUST00000005841,ENSMUST00000132679,NM_181322,uc009ndm.2_5end | |||
|cluster_id=chr8:108160409..108160489,+ | |||
|description=CAGE_peak_1_at_Ctcf_5end | |||
|id=chr8:108160409..108160489,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.03e-12!29;UBERON:0002390!7.61e-10!45;UBERON:0003061!7.61e-10!45;UBERON:0002370!2.08e-09!23;UBERON:0000974!2.08e-09!23;UBERON:0004807!2.08e-09!23;UBERON:0005058!2.08e-09!23;UBERON:0003351!2.08e-09!23;UBERON:0009113!2.08e-09!23;UBERON:0003295!2.08e-09!23;UBERON:0009722!2.08e-09!23;UBERON:0005562!2.08e-09!23;UBERON:0007690!2.08e-09!23;UBERON:0002193!2.42e-09!48;UBERON:0003408!6.68e-09!24;UBERON:0006562!9.46e-09!24;UBERON:0001557!9.46e-09!24;UBERON:0001042!9.46e-09!24;UBERON:0008814!9.46e-09!24;UBERON:0009145!9.46e-09!24;UBERON:0000065!2.26e-08!41;UBERON:0001004!4.42e-08!42;UBERON:0000072!2.42e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.03e-12,29;UBERON:0005057,2.03e-12,29;UBERON:0002390,7.61e-10,45;UBERON:0003061,7.61e-10,45;UBERON:0002370,2.08e-09,23;UBERON:0000974,2.08e-09,23;UBERON:0004807,2.08e-09,23;UBERON:0005058,2.08e-09,23;UBERON:0003351,2.08e-09,23;UBERON:0009113,2.08e-09,23;UBERON:0003295,2.08e-09,23;UBERON:0009722,2.08e-09,23;UBERON:0005562,2.08e-09,23;UBERON:0007690,2.08e-09,23;UBERON:0000153,2.18e-09,43;UBERON:0002193,2.42e-09,48;UBERON:0002405,2.42e-09,48;UBERON:0003408,6.68e-09,24;UBERON:0006562,9.46e-09,24;UBERON:0001557,9.46e-09,24;UBERON:0001042,9.46e-09,24;UBERON:0008814,9.46e-09,24;UBERON:0009145,9.46e-09,24;UBERON:0000077,1.08e-08,35;UBERON:0007811,1.22e-08,36;UBERON:0000065,2.26e-08,41;UBERON:0001004,4.42e-08,42;UBERON:0000072,2.42e-07,27 | |||
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|phase1_expression=40.5176583175129,36.9913932097723,38.6749353481106,42.3449895829562,38.5689712058687,39.9552667150298,44.8536269943409,80.443830504102,53.3589256954817,51.0260667381946,54.9609678003871,51.6125868699827,92.1059927029887,84.0110067246565,106.595123781012,128.36931952515,152.504489431936,85.4902468120824,92.8264715510851,75.1169683682513,30.9557576149894,52.0284584292639,54.0683563517596,41.5980299262857,38.7701685003517,30.4342940980961,29.7225777349762,28.4422027145374,37.0545667939929,38.8126399830293,28.8249663851896,27.9413496322238,25.2176562909674,47.5445043046316,40.4392267651784,39.8963148860382,38.7921776898501,65.2909343949576,47.6614560159518,64.3934205087772,50.5879079706672,68.3045484958446,59.2322630698007,27.0678158647491,25.6483635985372,22.5762505158868,10.9534788208725,13.5175596955877,13.4008571468028,13.8045228342741,27.017379373695,8.62515386189829,115.769998179838,108.07895915969,98.4754831487419,28.0412785279182,30.659078073447,26.2992767061496,62.9204193273349,59.2469896784677,59.5801519295808,9.14880236586657,16.0073063300005,8.54904731417329,17.7995945262055,14.9200824138681,7.78960287347852,14.9845139075406,79.2188638036769,84.1086995806433,75.0860112024434,21.9951257990929,28.2711732418065,79.2515470920753,85.7816965613216,104.790941673542,70.4741638396088,49.4149998389676,51.9190082406103,64.7561672755252,63.7668875908795,78.137005583514,33.2227768811643,28.138130501584,40.3387374130779,61.8720029494702,55.9520705540475,57.038230422542,26.8070724399472,37.9369231736063,56.5235752968272,26.673140186423,29.2387673494333,30.7630819233556,32.4888208723835,30.4658283226188,41.5715483589985,38.8581135477972,32.7330365799615,32.8605804294616,34.7883246848401,50.047326191584,173.267563000519,227.541345009066,50.8753946376353,44.3379764581423,40.9474800461974,40.7636450597044,150.701848282654,35.9229976536876,45.973611593026,45.6698217468212,40.3577120198102,33.9125941243401,45.0364748329749,37.4486442162433,40.0455847729686,45.1149993590124,82.2687813313383,51.6036251332235,77.0736899426773,96.4901753739092,50.325775528893,72.0240760648406,65.5568192326114,38.5740153364973,64.1010916106673,55.1910512513935,48.9220374231299,39.694519442278,44.8350590762254,66.8481153240439,50.5828771759525,45.0059204901382,41.557608911912,47.2122075527175,53.6693447491167,71.4096011301934,32.601235837944,45.2449990155919,69.0939552131957,52.1877777063984,68.063485066422,68.2692824795789,74.7721125673093,86.3486474719888,73.7432572285066,61.3126988651467,78.8978854134203,71.4820983034357,55.9524574841357,45.373516612508,61.1703948296315,58.506363975724,58.8536910126718,59.9093143123664,54.0704154231191,57.1312353794668,52.286083888789,40.8037771894939,54.1755198556332,56.5394872987587,42.1405629341674,54.8972206575257,47.8228049950873,49.0646623423361,53.1181334771246,45.4217181808289,47.5577966249959,45.1460526217512,44.1014323929455,42.3979963533464,44.5686734040833,38.5172421842267,48.7872680668775,60.3021028542607,40.6415103070072,44.4276951994754,69.7452579250215,63.6328480897602,57.4748877496536,49.2107800080956,39.8056698482318,39.7571558575249,37.9623249235609,38.3748564506945,43.7323263312469,35.8121649674071,45.0367041245168,39.5480539807857,39.3371250771944,44.6076452089783,49.3136542478012,71.4053203810805,65.3704866903866,67.0012868611084,58.9615560989582,54.2149887752162,47.7435855288143,39.8547399544926,42.2326577893298,33.9342200784951,33.795599487935,75.7476779951067,60.9332884850929,74.6542213117714,81.7526289195667,69.9413763282009,52.4529254669725,53.5114815658508,45.884269177335,52.1666685057355,70.4464211984037,36.4698128715133,38.0685961199764,40.9177782274321,33.3679189150757,25.0870631108951,58.5667612828137,50.5942069427194,66.0008154590205,79.1012099712377,80.2640649146677,60.6372651939373,50.4652518678349,45.2710063030093,64.6304090835383,60.4598602741156,62.6657240823924,60.9571530742545,53.3596593965617,50.9164686206921,96.5064217211342,42.4246433378593,35.8987919303896,42.2183221846241,40.9404004468869,38.679856575427,40.1640616172855,37.8706390806559,48.2727575706873,44.5100168498168,49.5473814785438,56.1576675188497,53.9172791279394,67.3722143277421,54.2446340244358,47.0531931237212,58.107303358139,66.1921911828922,42.2981453920641,47.1873849718226,56.8475488143981,54.2751704579642,42.4784442687881,65.30799112569,49.8833868991839,55.2612883684781,37.5033403958581,41.8111801203741,44.449666424934,53.0759245037158,50.9791251090152,50.5658812697306,43.2216295157495,38.1601510018291,36.7674774214091,73.4649263647746,50.061810623926,51.012214337519,52.8473896253975,42.2734097716907,45.9091767479918,35.3179340972935,38.2514884143848,34.7404596216665,33.5203165043542,108.989813194318,57.3198714770465,69.7820541418763,58.4924485615369,64.0149509005739,43.4306446578478,36.7142097980809,98.4216273395631,63.979929068599,84.6338990079582,131.481182989274,124.801829909296,106.381850541033,60.0023857878309,59.0595128805837,51.1339903076368,37.2321541025894,64.058038700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| ||
|short_description=p1@Ctcf | |||
}} | }} |
Latest revision as of 07:32, 27 September 2015
Short description: | p1@Ctcf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ctcf_5end |
Coexpression cluster: | MCL_coexpression_mm9:973 |
Association with transcript: | 0bp_to_ENSMUST00000005841, ENSMUST00000132679, NM_181322, uc009ndm.2_5end |
EntrezGene: | Ctcf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.03e-12 | 29 |
immune organ | 2.03e-12 | 29 |
hematopoietic system | 7.61e-10 | 45 |
blood island | 7.61e-10 | 45 |
thymus | 2.08e-09 | 23 |
neck | 2.08e-09 | 23 |
respiratory system epithelium | 2.08e-09 | 23 |
hemolymphoid system gland | 2.08e-09 | 23 |
pharyngeal epithelium | 2.08e-09 | 23 |
thymic region | 2.08e-09 | 23 |
pharyngeal gland | 2.08e-09 | 23 |
entire pharyngeal arch endoderm | 2.08e-09 | 23 |
thymus primordium | 2.08e-09 | 23 |
early pharyngeal endoderm | 2.08e-09 | 23 |
anterior region of body | 2.18e-09 | 43 |
hemolymphoid system | 2.42e-09 | 48 |
immune system | 2.42e-09 | 48 |
gland of gut | 6.68e-09 | 24 |
pharynx | 9.46e-09 | 24 |
upper respiratory tract | 9.46e-09 | 24 |
chordate pharynx | 9.46e-09 | 24 |
pharyngeal arch system | 9.46e-09 | 24 |
pharyngeal region of foregut | 9.46e-09 | 24 |
mixed endoderm/mesoderm-derived structure | 1.08e-08 | 35 |
craniocervical region | 1.22e-08 | 36 |
respiratory tract | 2.26e-08 | 41 |
respiratory system | 4.42e-08 | 42 |
segment of respiratory tract | 2.42e-07 | 27 |