FFCP PHASE1:Mm9::chrX:106392111..106392133,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=622976 | |EntrezGene=622976 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHV4 | |UniProt=Q8BHV4 | ||
|association_with_transcript=14bp_to_ENSMUST00000060013_5end | |association_with_transcript=14bp_to_ENSMUST00000060013_5end | ||
|cluster_id=chrX:106392111..106392133,+ | |||
|description=CAGE_peak_1_at_Gm6377_5end | |description=CAGE_peak_1_at_Gm6377_5end | ||
|id=chrX:106392111..106392133,+ | |id=chrX:106392111..106392133,+ | ||
|ontology_enrichment_celltype=CL:0000049!5.71e-08!19;CL:0000988!2.67e-07!32;CL:0002032!2.67e-07!32;CL:0000037!2.67e-07!32;CL:0000566!2.67e-07!32;CL:0000837!2.67e-07!32 | |ontology_enrichment_celltype=CL:0000049!5.71e-08!19;CL:0000988!2.67e-07!32;CL:0002032!2.67e-07!32;CL:0000037!2.67e-07!32;CL:0000566!2.67e-07!32;CL:0000837!2.67e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.94e-15,19;CL:0000988,4.08e-12,32;CL:0002032,4.08e-12,32;CL:0000037,4.08e-12,32;CL:0000837,4.08e-12,32;CL:0000763,3.59e-11,16;CL:0002320,2.08e-09,46;CL:0000134,2.08e-09,46;CL:0000553,8.54e-09,6;CL:0000556,8.54e-09,6;CL:0000219,2.44e-07,54;CL:0000557,3.66e-07,7;CL:0000839,4.08e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.09e-17!70;UBERON:0002193!8.05e-12!48;UBERON:0001474!8.38e-11!22;UBERON:0004765!8.38e-11!22;UBERON:0001434!8.38e-11!22;UBERON:0002371!2.03e-10!16;UBERON:0002390!3.52e-10!45;UBERON:0003061!3.52e-10!45;UBERON:0000926!1.02e-09!193;UBERON:0004120!1.02e-09!193;UBERON:0006603!1.02e-09!193;UBERON:0003081!2.01e-09!88;UBERON:0002204!1.16e-08!32;UBERON:0005057!1.57e-07!51;UBERON:0009569!6.66e-07!66 | |ontology_enrichment_uberon=UBERON:0002405!3.09e-17!70;UBERON:0002193!8.05e-12!48;UBERON:0001474!8.38e-11!22;UBERON:0004765!8.38e-11!22;UBERON:0001434!8.38e-11!22;UBERON:0002371!2.03e-10!16;UBERON:0002390!3.52e-10!45;UBERON:0003061!3.52e-10!45;UBERON:0000926!1.02e-09!193;UBERON:0004120!1.02e-09!193;UBERON:0006603!1.02e-09!193;UBERON:0003081!2.01e-09!88;UBERON:0002204!1.16e-08!32;UBERON:0005057!1.57e-07!51;UBERON:0009569!6.66e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.76e-13,16;UBERON:0002193,1.20e-12,48;UBERON:0002405,1.20e-12,48;UBERON:0001474,1.97e-12,22;UBERON:0004765,1.97e-12,22;UBERON:0001434,1.97e-12,22;UBERON:0002204,3.73e-10,32;UBERON:0002390,9.38e-10,45;UBERON:0003061,9.38e-10,45;UBERON:0002384,2.08e-09,46;UBERON:0002106,8.72e-08,6;UBERON:0004457,8.72e-08,6;UBERON:0000042,8.72e-08,6;UBERON:0004854,8.72e-08,6;UBERON:0009034,8.72e-08,6;UBERON:0002095,8.72e-08,6;UBERON:0004782,8.72e-08,6;UBERON:0003281,8.72e-08,6;UBERON:0009664,8.72e-08,6;UBERON:0002296,8.72e-08,6;UBERON:0005602,8.72e-08,6;UBERON:0001179,8.72e-08,6;UBERON:0006293,8.72e-08,6 | |||
|phase1_expression=1.92178616525753,0,0,0,0.500895729946347,0,0,0.129123323441576,3.37892933164,0,0.171217968225505,0.0797721589953364,0,0.174840804837995,0.999329285446988,5.26435695213547,4.89693314689703,24.6060488979425,24.8177124826387,22.4926515452956,0.255129870453209,0.695036658406197,0,1.59992422793407,1.14704640533585,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,1.5626706890476,0.523523743973798,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,92.9515637559859,0.725362142011344,1.34437519656986,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0.579728977403356,5.16254326188832,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.91347103775248,24.5990989464813,2.9688427812965,0,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0.494389935468748,0.578397427679647,0.884610551949874,0.323533699894818,0.220841518460394,1.45462575940567,1.86391761218122,0,0,1.53274233125155,1.91704199209472,1.19980546198682,3.93917703926501,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0.497627882440372,0.505445516867349,0.420883711772948,0.260240885925407,0,0,0,0.136072998302656,0,0,0,0.431135985865684,0,0,0.219195732427575,0,0,0,0,5.61770549850588,3.3455227924913,2.27330799516474,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,0.878200461164203,0.402619256281115,0,0.102904612379284,0,0.793351699990633,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0,0,0.994782360205754,0.38992817423824,0,0.432276099749388,1.39398891278057,0,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0.616985819609003,0.889357881261447,0,0.393117990226406,0.224862112384854,0.608580364165509,0.964708639009667,1.01850340712568,0.575392274901621,0.648540907100142,0.549122826376163,2.87536413054709,2.60498663367952,1.24815069245824,0.757736633841335,0.179397413521912,2.41221760681684,2.58654466233247,0.189491411770485,0.325929952884052,0,0,0,0,0.585400943573396,1.41871629695572,0.664394068946325,0.637819074629948,1.14704320301017,1.55416483679306,1.59113964439663,18.0949540727127,34.2660580805787,0,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.989820737835213,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,1.17335854031855,0.21183207086382,0,0.32977250588296,0.807322133479528,0.241251699712623,0.119372344003136,0.328281799490123,0.874442509889552,0,9.22702756308404,0.619160603889667,1.11116716421827,2.44878994106098,4.92099219795691,5.26189798375002,0.339956859987711,1.25956307091292,1.24379976423981,0.954670618015114,0,0,0,0.209088296014469,0,0,0.495920734352016,0,0.648074866458964,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0,0,1.58005560314089,0,0.102710957164827,0.25984164595559,0.179026695667481,0.39736270956253,0,0.443068581523732,0.302899349844443,0.228620419965,0.201652370273681,0.584747284438515,0.481059208201647,0.701261413089414,0,0,0,0,0.579568782096571,1.68914227906064,0.73260649706906,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0.256100609619477,0.114870937911227,0,0.347652977834566,0.38581844092741,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.507687647350059,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,1.07435527024149,0.191288332068843,0.441182838239031,0.463735671240843 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|phase1_expression=1.92178616525753,0,0,0,0.500895729946347,0,0,0.129123323441576,3.37892933164,0,0.171217968225505,0.0797721589953364,0,0.174840804837995,0.999329285446988,5.26435695213547,4.89693314689703,24.6060488979425,24.8177124826387,22.4926515452956,0.255129870453209,0.695036658406197,0,1.59992422793407,1.14704640533585,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,1.5626706890476,0.523523743973798,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,92.9515637559859,0.725362142011344,1.34437519656986,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0.579728977403356,5.16254326188832,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.91347103775248,24.5990989464813,2.9688427812965,0,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0.494389935468748,0.578397427679647,0.884610551949874,0.323533699894818,0.220841518460394,1.45462575940567,1.86391761218122,0,0,1.53274233125155,1.91704199209472,1.19980546198682,3.93917703926501,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0.497627882440372,0.505445516867349,0.420883711772948,0.260240885925407,0,0,0,0.136072998302656,0,0,0,0.431135985865684,0,0,0.219195732427575,0,0,0,0,5.61770549850588,3.3455227924913,2.27330799516474,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,0.878200461164203,0.402619256281115,0,0.102904612379284,0,0.793351699990633,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0,0,0.994782360205754,0.38992817423824,0,0.432276099749388,1.39398891278057,0,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0.616985819609003,0.889357881261447,0,0.393117990226406,0.224862112384854,0.608580364165509,0.964708639009667,1.01850340712568,0.575392274901621,0.648540907100142,0.549122826376163,2.87536413054709,2.60498663367952,1.24815069245824,0.757736633841335,0.179397413521912,2.41221760681684,2.58654466233247,0.189491411770485,0.325929952884052,0,0,0,0,0.585400943573396,1.41871629695572,0.664394068946325,0.637819074629948,1.14704320301017,1.55416483679306,1.59113964439663,18.0949540727127,34.2660580805787,0,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.989820737835213,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,1.17335854031855,0.21183207086382,0,0.32977250588296,0.807322133479528,0.241251699712623,0.119372344003136,0.328281799490123,0.874442509889552,0,9.22702756308404,0.619160603889667,1.11116716421827,2.44878994106098,4.92099219795691,5.26189798375002,0.339956859987711,1.25956307091292,1.24379976423981,0.954670618015114,0,0,0,0.209088296014469,0,0,0.495920734352016,0,0.648074866458964,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0,0,1.58005560314089,0,0.102710957164827,0.25984164595559,0.179026695667481,0.39736270956253,0,0.443068581523732,0.302899349844443,0.228620419965,0.201652370273681,0.584747284438515,0.481059208201647,0.701261413089414,0,0,0,0,0.579568782096571,1.68914227906064,0.73260649706906,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0.256100609619477,0.114870937911227,0,0.347652977834566,0.38581844092741,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.507687647350059,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,1.07435527024149,0.191288332068843,0.441182838239031,0.463735671240843 | ||
|short_description=p1@Gm6377 | |short_description=p1@Gm6377 | ||
}} | }} |
Latest revision as of 13:04, 1 October 2015
Short description: | p1@Gm6377 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm6377_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | 14bp_to_ENSMUST00000060013_5end |
EntrezGene: | Gm6377 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.94e-15 | 19 |
hematopoietic cell | 4.08e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.08e-12 | 32 |
hematopoietic stem cell | 4.08e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.08e-12 | 32 |
myeloid cell | 3.59e-11 | 16 |
connective tissue cell | 2.08e-09 | 46 |
mesenchymal cell | 2.08e-09 | 46 |
megakaryocyte progenitor cell | 8.54e-09 | 6 |
megakaryocyte | 8.54e-09 | 6 |
motile cell | 2.44e-07 | 54 |
granulocyte monocyte progenitor cell | 3.66e-07 | 7 |
myeloid lineage restricted progenitor cell | 4.08e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.76e-13 | 16 |
hemolymphoid system | 1.20e-12 | 48 |
immune system | 1.20e-12 | 48 |
bone element | 1.97e-12 | 22 |
skeletal element | 1.97e-12 | 22 |
skeletal system | 1.97e-12 | 22 |
musculoskeletal system | 3.73e-10 | 32 |
hematopoietic system | 9.38e-10 | 45 |
blood island | 9.38e-10 | 45 |
connective tissue | 2.08e-09 | 46 |
spleen | 8.72e-08 | 6 |
cavity lining | 8.72e-08 | 6 |
serous membrane | 8.72e-08 | 6 |
gastrointestinal system mesentery | 8.72e-08 | 6 |
stomach region | 8.72e-08 | 6 |
mesentery | 8.72e-08 | 6 |
gastrointestinal system serosa | 8.72e-08 | 6 |
mesentery of stomach | 8.72e-08 | 6 |
gut mesentery | 8.72e-08 | 6 |
dorsal mesentery | 8.72e-08 | 6 |
dorsal mesogastrium | 8.72e-08 | 6 |
peritoneal cavity | 8.72e-08 | 6 |
spleen primordium | 8.72e-08 | 6 |