Personal tools

FFCP PHASE1:Mm9::chr5:105775498..105775508,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:105775498..105775508,- |short_description=p1@Gbp11 |description=CAGE_peak_1_at_Gbp11_5end |association_with_transcript=-7bp_to_NM_001039647,uc008ylc.2_5end...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:105775498..105775508,-
|DHSsupport=NA
|short_description=p1@Gbp11
|DPIdataset=NA
|description=CAGE_peak_1_at_Gbp11_5end
|association_with_transcript=-7bp_to_NM_001039647,uc008ylc.2_5end
|EntrezGene=634650
|EntrezGene=634650
|HGNC=
|HGNC=
|MCL_coexpression_id=96
|TSSclassifier=NA
|UniProt=A9YVJ5,Q2TA93
|UniProt=A9YVJ5,Q2TA93
|association_with_transcript=-7bp_to_NM_001039647,uc008ylc.2_5end
|cluster_id=chr5:105775498..105775508,-
|description=CAGE_peak_1_at_Gbp11_5end
|id=chr5:105775498..105775508,-
|ontology_enrichment_celltype=CL:0000791!5.75e-07!9;CL:0000789!5.75e-07!9;CL:0002420!5.75e-07!9;CL:0002419!5.75e-07!9;CL:0000790!5.75e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002320,3.32e-11,46;CL:0000134,3.32e-11,46;CL:0002031,2.76e-10,25;CL:0000791,4.81e-10,9;CL:0000789,4.81e-10,9;CL:0002420,4.81e-10,9;CL:0002419,4.81e-10,9;CL:0000790,4.81e-10,9;CL:0000838,8.65e-10,12;CL:0000182,2.75e-09,5;CL:0000219,5.04e-09,54;CL:0000542,5.84e-09,13;CL:0000051,5.84e-09,13;CL:0000738,1.22e-08,17;CL:0002087,1.22e-08,17;CL:0000084,4.29e-08,11;CL:0000827,4.29e-08,11;CL:0000624,5.21e-08,8;CL:0000988,1.44e-07,32;CL:0002032,1.44e-07,32;CL:0000037,1.44e-07,32;CL:0000837,1.44e-07,32;CL:0000893,4.64e-07,6;CL:0002489,4.64e-07,6;CL:0000898,4.64e-07,6;CL:0000809,4.64e-07,6;CL:0000810,4.64e-07,6;CL:0000895,4.64e-07,6;CL:0000808,4.64e-07,6;CL:0000894,4.64e-07,6;CL:0000806,4.64e-07,6;CL:0000807,4.64e-07,6;CL:0000805,4.64e-07,6;CL:0002425,4.64e-07,6;CL:0002436,4.64e-07,6;CL:0002427,4.64e-07,6;CL:0002428,4.64e-07,6;CL:0002429,4.64e-07,6;CL:0002433,4.64e-07,6;CL:0002431,4.64e-07,6;CL:0002432,4.64e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002368!1.59e-16!60;UBERON:0005057!3.57e-16!51;UBERON:0002530!8.55e-15!65;UBERON:0002405!6.44e-14!70;UBERON:0000949!1.51e-12!72;UBERON:0003929!5.82e-12!55;UBERON:0005911!1.01e-10!69;UBERON:0000077!2.25e-10!97;UBERON:0001041!6.34e-10!92;UBERON:0002107!7.25e-09!22;UBERON:0007499!7.25e-09!22;UBERON:0006925!7.25e-09!22;UBERON:0009497!7.25e-09!22;UBERON:0000015!7.25e-09!22;UBERON:0002423!7.25e-09!22;UBERON:0006235!7.25e-09!22;UBERON:0008835!7.25e-09!22;UBERON:0003894!7.25e-09!22;UBERON:0004161!7.25e-09!22;UBERON:0008836!7.25e-09!22;UBERON:0002370!1.16e-08!23;UBERON:0000974!1.16e-08!23;UBERON:0004807!1.16e-08!23;UBERON:0005058!1.16e-08!23;UBERON:0003351!1.16e-08!23;UBERON:0009113!1.16e-08!23;UBERON:0003295!1.16e-08!23;UBERON:0009722!1.16e-08!23;UBERON:0005562!1.16e-08!23;UBERON:0007690!1.16e-08!23;UBERON:0000490!1.47e-08!66;UBERON:0009854!3.49e-08!23;UBERON:0009856!3.49e-08!23;UBERON:0004177!3.67e-08!29;UBERON:0006562!5.19e-08!24;UBERON:0003408!5.19e-08!24;UBERON:0001557!5.19e-08!24;UBERON:0001042!5.19e-08!24;UBERON:0008814!5.19e-08!24;UBERON:0009145!5.19e-08!24;UBERON:0002365!6.27e-08!25;UBERON:0002330!6.27e-08!25
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.33e-19,22;UBERON:0007499,2.33e-19,22;UBERON:0006925,2.33e-19,22;UBERON:0009497,2.33e-19,22;UBERON:0000015,2.33e-19,22;UBERON:0002423,2.33e-19,22;UBERON:0006235,2.33e-19,22;UBERON:0008835,2.33e-19,22;UBERON:0003894,2.33e-19,22;UBERON:0004161,2.33e-19,22;UBERON:0008836,2.33e-19,22;UBERON:0009854,2.19e-18,23;UBERON:0009856,2.19e-18,23;UBERON:0003929,5.29e-17,55;UBERON:0002365,1.13e-16,25;UBERON:0002330,1.13e-16,25;UBERON:0002368,3.49e-15,60;UBERON:0000490,6.40e-15,66;UBERON:0002530,1.20e-13,65;UBERON:0005911,1.41e-12,69;UBERON:0000949,7.46e-12,72;UBERON:0001041,2.14e-11,80;UBERON:0002384,3.32e-11,46;UBERON:0003914,7.89e-09,47;UBERON:0005256,5.83e-08,45;UBERON:0005172,4.42e-07,49;UBERON:0005173,4.42e-07,49;UBERON:0002417,4.42e-07,49;UBERON:0000916,4.42e-07,49
|phase1_expression=2.24208385946712,0,0,0,0,0,0.467225281191051,0.903863264091034,1.267098499365,2.10658073689794,0.34243593645101,0.0797721589953364,3.93761678841773,2.36035086531293,0,0.607425802169478,0,1.73504190947031,1.7824876368746,1.27316895539409,0,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,3.62681071005672,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,4.34796733052517,4.30211938490693,0,2.15881276655127,13.6453047664011,12.9927797258227,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0,3.32578520915797,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,2.07516838961004,0.166845105716094,0.196558995113203,0,0,0,0,0.863088412352432,0.324270453550071,15.6500005517206,33.0666875012915,41.3076451912039,37.4445207737473,3.53610429125956,7.71408878144222,4.82443521363367,0,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,3.01582567878545,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.354680467284547,0.713475270408282,0.493647061806363,0,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,1.35982743995084,2.09927178485487,1.65839968565309,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0.404593039154462,1.73572257023205,0.26175594198403,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0.288030006257865,1.26404448251271,0,0.410843828659309,0.649604114888975,0.179026695667481,0.79472541912506,0.721172697119813,0.590758108698309,1.00966449948148,0.762068066549998,1.00826185136841,0.779663045918019,0.865906574762965,1.40252282617883,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0,0,0.0936415074698824,0.192075457214608,0,0,0.115884325944855,0,0.824171801606613,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=2.24208385946712,0,0,0,0,0,0.467225281191051,0.903863264091034,1.267098499365,2.10658073689794,0.34243593645101,0.0797721589953364,3.93761678841773,2.36035086531293,0,0.607425802169478,0,1.73504190947031,1.7824876368746,1.27316895539409,0,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,3.62681071005672,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,4.34796733052517,4.30211938490693,0,2.15881276655127,13.6453047664011,12.9927797258227,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0,3.32578520915797,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,2.07516838961004,0.166845105716094,0.196558995113203,0,0,0,0,0.863088412352432,0.324270453550071,15.6500005517206,33.0666875012915,41.3076451912039,37.4445207737473,3.53610429125956,7.71408878144222,4.82443521363367,0,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,3.01582567878545,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.354680467284547,0.713475270408282,0.493647061806363,0,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,1.35982743995084,2.09927178485487,1.65839968565309,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0.404593039154462,1.73572257023205,0.26175594198403,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0.288030006257865,1.26404448251271,0,0.410843828659309,0.649604114888975,0.179026695667481,0.79472541912506,0.721172697119813,0.590758108698309,1.00966449948148,0.762068066549998,1.00826185136841,0.779663045918019,0.865906574762965,1.40252282617883,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0,0,0.0936415074698824,0.192075457214608,0,0,0.115884325944855,0,0.824171801606613,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p1@Gbp11
}}
}}

Latest revision as of 13:30, 1 October 2015

Short description:p1@Gbp11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gbp11_5end
Coexpression cluster:MCL_coexpression_mm9:96
Association with transcript: -7bp_to_NM_001039647, uc008ylc.2_5end
EntrezGene:Gbp11
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gbp11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G215.65
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H241.31
liver, neonate N10.CNhs11115.751-24B937.44
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
connective tissue cell3.32e-1146
mesenchymal cell3.32e-1146
hematopoietic lineage restricted progenitor cell2.76e-1025
mature alpha-beta T cell4.81e-109
alpha-beta T cell4.81e-109
immature T cell4.81e-109
mature T cell4.81e-109
immature alpha-beta T cell4.81e-109
lymphoid lineage restricted progenitor cell8.65e-1012
hepatocyte2.75e-095
motile cell5.04e-0954
lymphocyte5.84e-0913
common lymphoid progenitor5.84e-0913
leukocyte1.22e-0817
nongranular leukocyte1.22e-0817
T cell4.29e-0811
pro-T cell4.29e-0811
CD4-positive, alpha-beta T cell5.21e-088
hematopoietic cell1.44e-0732
hematopoietic oligopotent progenitor cell1.44e-0732
hematopoietic stem cell1.44e-0732
hematopoietic multipotent progenitor cell1.44e-0732
thymocyte4.64e-076
double negative thymocyte4.64e-076
naive T cell4.64e-076
double-positive, alpha-beta thymocyte4.64e-076
CD4-positive, alpha-beta thymocyte4.64e-076
naive thymus-derived CD4-positive, alpha-beta T cell4.64e-076
DN4 thymocyte4.64e-076
DN1 thymic pro-T cell4.64e-076
DN2 thymocyte4.64e-076
DN3 thymocyte4.64e-076
immature single positive thymocyte4.64e-076
early T lineage precursor4.64e-076
mature CD4 single-positive thymocyte4.64e-076
resting double-positive thymocyte4.64e-076
double-positive blast4.64e-076
CD69-positive double-positive thymocyte4.64e-076
CD69-positive, CD4-positive single-positive thymocyte4.64e-076
CD4-positive, CD8-intermediate double-positive thymocyte4.64e-076
CD24-positive, CD4 single-positive thymocyte4.64e-076

Uber anatomy
Ontology termp-valuen
liver2.33e-1922
epithelial sac2.33e-1922
digestive gland2.33e-1922
epithelium of foregut-midgut junction2.33e-1922
anatomical boundary2.33e-1922
hepatobiliary system2.33e-1922
foregut-midgut junction2.33e-1922
hepatic diverticulum2.33e-1922
liver primordium2.33e-1922
septum transversum2.33e-1922
liver bud2.33e-1922
digestive tract diverticulum2.19e-1823
sac2.19e-1823
gut epithelium5.29e-1755
exocrine gland1.13e-1625
exocrine system1.13e-1625
endocrine gland3.49e-1560
unilaminar epithelium6.40e-1566
gland1.20e-1365
endo-epithelium1.41e-1269
endocrine system7.46e-1272
foregut2.14e-1180
connective tissue3.32e-1146
epithelial tube7.89e-0947
trunk mesenchyme5.83e-0845
abdomen element4.42e-0749
abdominal segment element4.42e-0749
abdominal segment of trunk4.42e-0749
abdomen4.42e-0749
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:105775498..105775508,-&oldid=4305268"