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FFCP PHASE1:Mm9::chr3:126299270..126299290,+: Difference between revisions

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{{FFCP|EntrezGene=108058|HGNC=|MCL_coexpression_id=190|UniProt=|association_with_transcript=50bp_to_ENSMUST00000143383_5end|description=CAGE_peak_6_at_Camk2d_5end|id=chr3:126299270..126299290,+|ontology_enrichment_celltype=CL:0000144!4.39e-12!121;CL:0000012!4.39e-12!121;CL:0002371!6.01e-11!118;CL:0000548!8.90e-10!115;CL:0000004!8.90e-10!115;CL:0000255!8.90e-10!115;CL:0000034!9.27e-08!97;CL:0000723!1.56e-07!91;CL:0000048!1.56e-07!91;CL:0000219!3.65e-07!54|ontology_enrichment_celltype_v019_2=CL:0000219,1.09e-11,54;CL:0000791,1.78e-10,9;CL:0000789,1.78e-10,9;CL:0002420,1.78e-10,9;CL:0002419,1.78e-10,9;CL:0000790,1.78e-10,9;CL:0000624,2.34e-09,8;CL:0000838,3.03e-09,12;CL:0000738,1.23e-08,17;CL:0002087,1.23e-08,17;CL:0000034,2.33e-08,97;CL:0000542,2.63e-08,13;CL:0000051,2.63e-08,13;CL:0002031,3.89e-08,25;CL:0000084,4.18e-08,11;CL:0000827,4.18e-08,11;CL:0000723,1.38e-07,91;CL:0000048,1.38e-07,91;CL:0000893,1.61e-07,6;CL:0002489,1.61e-07,6;CL:0000898,1.61e-07,6;CL:0000809,1.61e-07,6;CL:0000810,1.61e-07,6;CL:0000895,1.61e-07,6;CL:0000808,1.61e-07,6;CL:0000894,1.61e-07,6;CL:0000806,1.61e-07,6;CL:0000807,1.61e-07,6;CL:0000805,1.61e-07,6;CL:0002425,1.61e-07,6;CL:0002436,1.61e-07,6;CL:0002427,1.61e-07,6;CL:0002428,1.61e-07,6;CL:0002429,1.61e-07,6;CL:0002433,1.61e-07,6;CL:0002431,1.61e-07,6;CL:0002432,1.61e-07,6;CL:0000128,2.04e-07,6;CL:0000126,2.04e-07,6;CL:0000127,2.04e-07,6;CL:0000333,3.47e-07,10;CL:0000095,3.47e-07,10;CL:0000243,3.47e-07,10;CL:0000123,3.47e-07,10;CL:0000125,3.47e-07,10;CL:0000030,3.47e-07,10;CL:0000339,3.47e-07,10;CL:0000988,7.25e-07,32;CL:0002032,7.25e-07,32;CL:0000037,7.25e-07,32;CL:0000837,7.25e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.44133962394315,1.39590163055744,0.454999239389536,1.81478526784098,3.50627010962443,1.34303417529512,0.467225281191051,9.8133725815598,13.51571732656,11.9372908424217,1.88339765048055,1.11681022593471,2.39681021903688,5.50748535239684,0,0.202475267389826,0.699561878128147,2.99689057090326,2.87940310572051,1.69755860719212,0.255129870453209,0.496454756004426,0.261199789138935,0.319984845586813,0,1.72269589234506,1.7230479846363,0.646413698057667,0.570070258369122,0,0.665191531965914,0,0,0,2.88851619751275,1.32987716286794,1.83752420636132,2.09265815368454,1.5626706890476,1.57057123192139,5.29408339227913,2.04913645487534,1.45653105909346,1.76255545165808,1.31790010585369,0.917733760808408,3.9119567217402,1.96222640742402,1.97717564461025,2.3331587888914,1.53985063787899,2.87505128729943,6.71130424230945,1.45072428402269,3.02484419228218,0,0,1.54701627683233,0.809265843438391,1.05798195854407,0.633831403506179,1.69422266034566,0.889294796111139,0.899899717281399,2.96659908770092,0.7104801149461,0.599200221036809,0.768436610643109,0.103689612308478,0.405017814995072,0,0.571301968807607,0.883474163806454,0.489963196859816,0.287536413054709,0,3.30347642998166,0.893811366596314,0.921639199537461,0.395658863190582,0.823388792421687,0.52091337055676,0.837548997004143,3.37657566019008,1.5279824777681,1.47314292736834,1.70846016958924,0.931997229126503,1.8931548333296,3.6274348851257,4.63783181922684,0.860423876981386,2.03991400112325,0,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,1.54927761754349,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.34255163915718,0,0.742210695324124,0,0.913396434936424,0.691846491768175,0.753613202763113,0.705532242814229,0.879666139307728,1.23597483867187,0.722996784599558,0,0.323533699894818,0.220841518460394,0,0,1.17112318804619,1.67557365450764,0.255457055208591,0.838705871541442,1.19980546198682,1.14363204365758,1.19832511523858,0.915001205637253,0.251308704225729,0.173824320192276,1.27857728665165,1.45451631191692,0.486723789203273,0.81471491080253,0.497627882440372,1.26361379216837,1.47309299120532,0.520481771850815,0,0.900310649026746,0.452114453507145,0.884474488967262,0.768682321709099,0.562210347358373,0.258703370739016,0.431135985865684,1.32374256117473,1.05570674498369,0.657587197282725,0.834141747676794,0.696504333044333,0.205782136407943,0.199034266818493,0,0.51469581422943,0.284163499395593,0.621377317606506,0.703578179943289,0.540186184383045,0.710234206755631,0.590292695242212,0.617068451549513,1.39520366850245,1.07309360559848,1.5179494507732,1.48103864922132,1.47750717671186,0.324275238183423,1.02339991197733,0.878200461164203,1.20785776884335,1.26173969138476,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.644337306610467,0,0.889512175379481,0.190225626112559,0,0.164698954724011,0,0,0.38992817423824,0,0,0.398282546508734,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.631222379012867,0.379419222745544,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0.189491411770485,0.48889492932607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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108058
|HGNC=
|MCL_coexpression_id=190
|TSSclassifier=NA
|UniProt=
|association_with_transcript=50bp_to_ENSMUST00000143383_5end
|cluster_id=chr3:126299270..126299290,+
|description=CAGE_peak_6_at_Camk2d_5end
|id=chr3:126299270..126299290,+
|ontology_enrichment_celltype=CL:0000144!4.39e-12!121;CL:0000012!4.39e-12!121;CL:0002371!6.01e-11!118;CL:0000548!8.90e-10!115;CL:0000004!8.90e-10!115;CL:0000255!8.90e-10!115;CL:0000034!9.27e-08!97;CL:0000723!1.56e-07!91;CL:0000048!1.56e-07!91;CL:0000219!3.65e-07!54
|ontology_enrichment_celltype_v019_2=CL:0000219,1.09e-11,54;CL:0000791,1.78e-10,9;CL:0000789,1.78e-10,9;CL:0002420,1.78e-10,9;CL:0002419,1.78e-10,9;CL:0000790,1.78e-10,9;CL:0000624,2.34e-09,8;CL:0000838,3.03e-09,12;CL:0000738,1.23e-08,17;CL:0002087,1.23e-08,17;CL:0000034,2.33e-08,97;CL:0000542,2.63e-08,13;CL:0000051,2.63e-08,13;CL:0002031,3.89e-08,25;CL:0000084,4.18e-08,11;CL:0000827,4.18e-08,11;CL:0000723,1.38e-07,91;CL:0000048,1.38e-07,91;CL:0000893,1.61e-07,6;CL:0002489,1.61e-07,6;CL:0000898,1.61e-07,6;CL:0000809,1.61e-07,6;CL:0000810,1.61e-07,6;CL:0000895,1.61e-07,6;CL:0000808,1.61e-07,6;CL:0000894,1.61e-07,6;CL:0000806,1.61e-07,6;CL:0000807,1.61e-07,6;CL:0000805,1.61e-07,6;CL:0002425,1.61e-07,6;CL:0002436,1.61e-07,6;CL:0002427,1.61e-07,6;CL:0002428,1.61e-07,6;CL:0002429,1.61e-07,6;CL:0002433,1.61e-07,6;CL:0002431,1.61e-07,6;CL:0002432,1.61e-07,6;CL:0000128,2.04e-07,6;CL:0000126,2.04e-07,6;CL:0000127,2.04e-07,6;CL:0000333,3.47e-07,10;CL:0000095,3.47e-07,10;CL:0000243,3.47e-07,10;CL:0000123,3.47e-07,10;CL:0000125,3.47e-07,10;CL:0000030,3.47e-07,10;CL:0000339,3.47e-07,10;CL:0000988,7.25e-07,32;CL:0002032,7.25e-07,32;CL:0000037,7.25e-07,32;CL:0000837,7.25e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=1.44133962394315,1.39590163055744,0.454999239389536,1.81478526784098,3.50627010962443,1.34303417529512,0.467225281191051,9.8133725815598,13.51571732656,11.9372908424217,1.88339765048055,1.11681022593471,2.39681021903688,5.50748535239684,0,0.202475267389826,0.699561878128147,2.99689057090326,2.87940310572051,1.69755860719212,0.255129870453209,0.496454756004426,0.261199789138935,0.319984845586813,0,1.72269589234506,1.7230479846363,0.646413698057667,0.570070258369122,0,0.665191531965914,0,0,0,2.88851619751275,1.32987716286794,1.83752420636132,2.09265815368454,1.5626706890476,1.57057123192139,5.29408339227913,2.04913645487534,1.45653105909346,1.76255545165808,1.31790010585369,0.917733760808408,3.9119567217402,1.96222640742402,1.97717564461025,2.3331587888914,1.53985063787899,2.87505128729943,6.71130424230945,1.45072428402269,3.02484419228218,0,0,1.54701627683233,0.809265843438391,1.05798195854407,0.633831403506179,1.69422266034566,0.889294796111139,0.899899717281399,2.96659908770092,0.7104801149461,0.599200221036809,0.768436610643109,0.103689612308478,0.405017814995072,0,0.571301968807607,0.883474163806454,0.489963196859816,0.287536413054709,0,3.30347642998166,0.893811366596314,0.921639199537461,0.395658863190582,0.823388792421687,0.52091337055676,0.837548997004143,3.37657566019008,1.5279824777681,1.47314292736834,1.70846016958924,0.931997229126503,1.8931548333296,3.6274348851257,4.63783181922684,0.860423876981386,2.03991400112325,0,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,1.54927761754349,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.34255163915718,0,0.742210695324124,0,0.913396434936424,0.691846491768175,0.753613202763113,0.705532242814229,0.879666139307728,1.23597483867187,0.722996784599558,0,0.323533699894818,0.220841518460394,0,0,1.17112318804619,1.67557365450764,0.255457055208591,0.838705871541442,1.19980546198682,1.14363204365758,1.19832511523858,0.915001205637253,0.251308704225729,0.173824320192276,1.27857728665165,1.45451631191692,0.486723789203273,0.81471491080253,0.497627882440372,1.26361379216837,1.47309299120532,0.520481771850815,0,0.900310649026746,0.452114453507145,0.884474488967262,0.768682321709099,0.562210347358373,0.258703370739016,0.431135985865684,1.32374256117473,1.05570674498369,0.657587197282725,0.834141747676794,0.696504333044333,0.205782136407943,0.199034266818493,0,0.51469581422943,0.284163499395593,0.621377317606506,0.703578179943289,0.540186184383045,0.710234206755631,0.590292695242212,0.617068451549513,1.39520366850245,1.07309360559848,1.5179494507732,1.48103864922132,1.47750717671186,0.324275238183423,1.02339991197733,0.878200461164203,1.20785776884335,1.26173969138476,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.644337306610467,0,0.889512175379481,0.190225626112559,0,0.164698954724011,0,0,0.38992817423824,0,0,0.398282546508734,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.631222379012867,0.379419222745544,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0,0.502518772325447,0.476087281772027,0.585400943573396,0.315270288212382,0.8858587585951,0.637819074629948,0.163863314715738,0.172684981865896,0.433947175744535,3.01582567878545,2.17562273527484,0,0.275936746304732,0.80275294993896,0.703270119553219,0.163934945376675,0.757412781613119,0.631016438832513,0.390438744296638,0.430846795465598,0,0.668396022247182,0.849229592366497,0.404810701674894,0.876767573733936,0.395287777946524,0.963963949265421,0.283880170416537,0.178065603667255,0.651547837414304,1.31976098378028,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,2.38307724027652,0.18006109403131,0.517434735131018,0.643011105094777,0.709360934569094,0.356737635204141,0.987294123612726,0.304464949114599,0.23467170806371,0.847328283455281,0,0.32977250588296,0.322928853391811,0.482503399425247,0,0.328281799490123,0.291480836629851,0.556275906031529,0.512612642393558,0.206386867963223,0.370389054739423,0,0.136694227721025,0,1.5298058699447,1.81936888020755,1.38199973804424,0,0.474503990371703,0.406638934253697,0.648032044930808,0.209088296014469,0.436725127492355,0.269728692769641,0.578574190077352,0,0.648074866458964,1.86401793926078,0,0,0.330916980914195,0.972255941720238,1.16243841129958,1.18269287843545,0.821500670520278,1.8228613878153,0.734015410979976,0.241584120826006,0.288030006257865,0.948033361884535,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,1.19208812868759,0.480781798079875,1.32920574457119,0.706765149637033,0.762068066549998,0.403304740547362,0.38983152295901,0.865906574762965,1.28564592399726,0.453460767230423,0.443971906748129,0.0897138566094757,0.167884616364078,1.15913756419314,0.563047426353546,0,0.214368379079066,1.50471631210609,1.12950368523413,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0,0.853668028770671,0.486213434136588,0,0,0.222246727801615,0.618105171716683,0,0.758091635291392,0.50695859978048,0.377252682772152,0.37456602987953,0.768301828858431,0.976402972245426,0,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,0,0.593175090620871,0.394017929502254,0,0.619747364743864,0.192906610981141,0,0.467863216890817,0.429742108096597,0.765153328275374,1.10295709559758,0.231867835620421
|short_description=p6@Camk2d
}}

Latest revision as of 13:44, 1 October 2015

Short description:p6@Camk2d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Camk2d_5end
Coexpression cluster:MCL_coexpression_mm9:190
Association with transcript: 50bp_to_ENSMUST00000143383_5end
EntrezGene:Camk2d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Camk2d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F93.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
motile cell1.09e-1154
mature alpha-beta T cell1.78e-109
alpha-beta T cell1.78e-109
immature T cell1.78e-109
mature T cell1.78e-109
immature alpha-beta T cell1.78e-109
CD4-positive, alpha-beta T cell2.34e-098
lymphoid lineage restricted progenitor cell3.03e-0912
leukocyte1.23e-0817
nongranular leukocyte1.23e-0817
stem cell2.33e-0897
lymphocyte2.63e-0813
common lymphoid progenitor2.63e-0813
hematopoietic lineage restricted progenitor cell3.89e-0825
T cell4.18e-0811
pro-T cell4.18e-0811
somatic stem cell1.38e-0791
multi fate stem cell1.38e-0791
thymocyte1.61e-076
double negative thymocyte1.61e-076
naive T cell1.61e-076
double-positive, alpha-beta thymocyte1.61e-076
CD4-positive, alpha-beta thymocyte1.61e-076
naive thymus-derived CD4-positive, alpha-beta T cell1.61e-076
DN4 thymocyte1.61e-076
DN1 thymic pro-T cell1.61e-076
DN2 thymocyte1.61e-076
DN3 thymocyte1.61e-076
immature single positive thymocyte1.61e-076
early T lineage precursor1.61e-076
mature CD4 single-positive thymocyte1.61e-076
resting double-positive thymocyte1.61e-076
double-positive blast1.61e-076
CD69-positive double-positive thymocyte1.61e-076
CD69-positive, CD4-positive single-positive thymocyte1.61e-076
CD4-positive, CD8-intermediate double-positive thymocyte1.61e-076
CD24-positive, CD4 single-positive thymocyte1.61e-076
oligodendrocyte2.04e-076
macroglial cell2.04e-076
astrocyte2.04e-076
migratory neural crest cell3.47e-0710
neuron associated cell3.47e-0710
glial cell (sensu Vertebrata)3.47e-0710
neuron associated cell (sensu Vertebrata)3.47e-0710
glial cell3.47e-0710
glioblast3.47e-0710
glioblast (sensu Vertebrata)3.47e-0710
hematopoietic cell7.25e-0732
hematopoietic oligopotent progenitor cell7.25e-0732
hematopoietic stem cell7.25e-0732
hematopoietic multipotent progenitor cell7.25e-0732
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