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FFCP PHASE1:Mm9::chr18:65183465..65183506,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:65183465..65183506,+
|DHSsupport=NA
|short_description=p4@Nedd4l
|DPIdataset=NA
|description=CAGE_peak_4_at_Nedd4l_5end
|association_with_transcript=284bp_to_ENSMUST00000080418,ENSMUST00000163809,ENSMUST00000170658,NM_031881,uc008fep.2,uc008feq.2,uc008fer.2_5end
|EntrezGene=83814
|EntrezGene=83814
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=G3X9H8,F6ZTP8,F7AT14,Q80U03,Q3TQK9,Q8CFI0
|UniProt=G3X9H8,F6ZTP8,F7AT14,Q80U03,Q3TQK9,Q8CFI0
|association_with_transcript=284bp_to_ENSMUST00000080418,ENSMUST00000163809,ENSMUST00000170658,NM_031881,uc008fep.2,uc008feq.2,uc008fer.2_5end
|cluster_id=chr18:65183465..65183506,+
|description=CAGE_peak_4_at_Nedd4l_5end
|id=chr18:65183465..65183506,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!3.19e-12!122;UBERON:0000025!1.92e-10!114;UBERON:0002365!3.91e-10!25;UBERON:0002330!3.91e-10!25;UBERON:0009854!5.51e-10!23;UBERON:0009856!5.51e-10!23;UBERON:0002107!1.42e-09!22;UBERON:0007499!1.42e-09!22;UBERON:0006925!1.42e-09!22;UBERON:0009497!1.42e-09!22;UBERON:0000015!1.42e-09!22;UBERON:0002423!1.42e-09!22;UBERON:0006235!1.42e-09!22;UBERON:0008835!1.42e-09!22;UBERON:0003894!1.42e-09!22;UBERON:0004161!1.42e-09!22;UBERON:0008836!1.42e-09!22;UBERON:0005177!6.85e-09!85;UBERON:0002021!8.55e-08!10;UBERON:0000411!8.55e-08!10;UBERON:0001950!8.55e-08!10;UBERON:0003080!9.23e-08!40;UBERON:0000955!1.46e-07!50;UBERON:0006238!1.46e-07!50;UBERON:0002780!2.54e-07!39;UBERON:0001890!2.54e-07!39;UBERON:0006240!2.54e-07!39;UBERON:0002616!3.34e-07!49;UBERON:0009569!6.53e-07!66;UBERON:0000468!8.08e-07!333;UBERON:0000475!8.61e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.12e-12,122;UBERON:0000025,3.05e-10,114;UBERON:0009854,8.02e-10,23;UBERON:0009856,8.02e-10,23;UBERON:0002365,1.31e-09,25;UBERON:0002330,1.31e-09,25;UBERON:0002107,2.39e-09,22;UBERON:0007499,2.39e-09,22;UBERON:0006925,2.39e-09,22;UBERON:0009497,2.39e-09,22;UBERON:0000015,2.39e-09,22;UBERON:0002423,2.39e-09,22;UBERON:0006235,2.39e-09,22;UBERON:0008835,2.39e-09,22;UBERON:0003894,2.39e-09,22;UBERON:0004161,2.39e-09,22;UBERON:0008836,2.39e-09,22;UBERON:0002021,6.54e-09,10;UBERON:0000411,6.54e-09,10;UBERON:0001950,6.54e-09,10;UBERON:0005177,7.70e-09,79;UBERON:0003080,3.87e-08,40;UBERON:0002780,1.22e-07,39;UBERON:0001890,1.22e-07,39;UBERON:0006240,1.22e-07,39;UBERON:0000955,1.84e-07,47;UBERON:0006238,1.84e-07,47;UBERON:0002616,4.64e-07,46
|phase1_expression=2.24208385946712,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0.159992422793407,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.54607978666129,1.5923803897944,0.383381884072945,1.83843757322004,0,9.3211756802187,4.6081959976873,0.263772575460388,0.548925861614458,0.52091337055676,2.51264699101243,6.75315132038016,4.43114918552749,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.0755715601067855,9.27566363845369,7.74381489283248,8.83962733820076,7.55584468292944,13.6453047664011,11.2006721774334,1.82577746171277,0,0,0,2.25349471642689,0,0,0,0.865964164044856,0.506719730950197,2.52762222507392,3.9964357901671,0,0,0,0,0,0,0.470354828542819,0,8.89901883843746,0,0,0,0.662524555381181,0.484875253135222,5.59175283654366,0.585561594023094,0.83778682725382,0,0,0,0,9.8861822007183,34.312545211397,8.92145900001337,20.3374454624963,19.6900902144355,9.55825004973976,21.5780879880118,0.81471491080253,1.8661045591514,8.08712826987759,1.68353484709179,0.130120442962704,0,0.360124259610698,1.35634336052144,0.340182495756639,0.384341160854549,0.655912071918102,1.55222022443409,0,0,0.527853372491847,0,0.834141747676794,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0,0,0.164167464079095,0,0,0,0,13.24826675954,0.308713837137853,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,1.67527699718721,3.02525286935014,1.77902435075896,1.71203063501303,0.474529061544512,1.97638745668813,2.76468729680296,3.18330355265841,3.31438948102504,0.898819408654221,3.45820879799511,0.995706366271836,0.189667900953082,0.685491075658373,3.38123207019241,0.814605311381257,0.969762435838129,1.47285221769669,1.96033265085198,2.95220295959204,1.8839847340965,2.34454611451421,16.3048944897932,0.83422552858047,0.786235980452812,0.674586337154561,1.21716072833102,4.3411888755435,3.31013607315846,10.9324532231308,15.7271169971784,5.21666685057355,30.1913233707445,11.5363693777236,9.98520553966594,16.6702059445094,10.9432422248366,17.3679667690812,5.91210208533135,0,0.814824882210129,3.22515662972857,4.69380496577004,15.2430694272052,14.9967493758189,8.78101415360095,6.30540576424764,3.32197034473162,5.58091690301205,3.4411296090305,5.00786447411097,4.48412081602686,0,0,6.39293554924747,6.34654516500885,3.21101179975584,4.21962071731931,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,6.10510501201433,0.99358059645788,0.178065603667255,0.651547837414304,1.15479086080775,5.30980553359851,2.18502572539483,1.209294227859,2.82907619633847,2.06711325016541,2.76691633149535,2.06742634534577,1.45413491791002,2.49548164869305,2.52829406348653,2.10837217149998,1.03135543248187,39.4909942674394,0.540183282093931,0.646793418913773,1.92903331528433,5.32020700926821,5.70780216326626,5.43011767986999,3.04464949114599,1.64270195644597,4.02480934641258,1.98475558249466,2.80306630000516,2.74489525383039,1.80938774784468,1.90995750405018,2.1338316966858,2.91480836629851,2.59595422814714,0,0.412773735926445,0,0,0,0,0,0,0,5.72802370809068,0.474503990371703,2.84647253977588,2.05210147561422,2.50905955217362,2.18362563746178,2.42755823492677,2.31429676030941,0.523511883968059,5.83267379813068,0.621339313086926,0,0,0,0,0,0,0,0.39061315453185,0.104859344425711,0,0,0.316011120628178,1.01362607645082,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,2.0405734525369,0.665957860122194,0,1.00730769818447,11.204996453867,0.375364950902364,0.915758121336325,3.85863082342319,8.02515366456581,12.4245405375755,15.651058041244,17.7597609166213,15.9823459579629,13.7016503954128,10.5755145634558,17.550585006027,22.0657389579868,20.8445508132734,22.2636934053283,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.919217542250071,2.44471400581777,2.26638562962784,2.24643446714271,2.27427490587418,1.77435509923168,2.45214243801899,1.96647165686753,2.24088033417042,2.69946704091382,1.42888107384922,2.78122382267653,2.50781986602817,1.64834360321323,3.38557516309114,3.08582327146874,3.01708870470874,3.33810665926249,3.34296758254356,2.1645157495526,2.5384382367503,2.0122077016005,1.57841826862706,2.8518863907631,1.68342681497322,2.60997039873183,1.97008964751127,5.32000356120596,2.01417893541756,1.15743966588685,1.49886346762768,2.10538447600868,2.57845264857958,0.956441660344217,0.661774257358546,0.231867835620421
|phase1_expression=2.24208385946712,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0.159992422793407,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.54607978666129,1.5923803897944,0.383381884072945,1.83843757322004,0,9.3211756802187,4.6081959976873,0.263772575460388,0.548925861614458,0.52091337055676,2.51264699101243,6.75315132038016,4.43114918552749,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.0755715601067855,9.27566363845369,7.74381489283248,8.83962733820076,7.55584468292944,13.6453047664011,11.2006721774334,1.82577746171277,0,0,0,2.25349471642689,0,0,0,0.865964164044856,0.506719730950197,2.52762222507392,3.9964357901671,0,0,0,0,0,0,0.470354828542819,0,8.89901883843746,0,0,0,0.662524555381181,0.484875253135222,5.59175283654366,0.585561594023094,0.83778682725382,0,0,0,0,9.8861822007183,34.312545211397,8.92145900001337,20.3374454624963,19.6900902144355,9.55825004973976,21.5780879880118,0.81471491080253,1.8661045591514,8.08712826987759,1.68353484709179,0.130120442962704,0,0.360124259610698,1.35634336052144,0.340182495756639,0.384341160854549,0.655912071918102,1.55222022443409,0,0,0.527853372491847,0,0.834141747676794,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0,0,0.164167464079095,0,0,0,0,13.24826675954,0.308713837137853,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,1.67527699718721,3.02525286935014,1.77902435075896,1.71203063501303,0.474529061544512,1.97638745668813,2.76468729680296,3.18330355265841,3.31438948102504,0.898819408654221,3.45820879799511,0.995706366271836,0.189667900953082,0.685491075658373,3.38123207019241,0.814605311381257,0.969762435838129,1.47285221769669,1.96033265085198,2.95220295959204,1.8839847340965,2.34454611451421,16.3048944897932,0.83422552858047,0.786235980452812,0.674586337154561,1.21716072833102,4.3411888755435,3.31013607315846,10.9324532231308,15.7271169971784,5.21666685057355,30.1913233707445,11.5363693777236,9.98520553966594,16.6702059445094,10.9432422248366,17.3679667690812,5.91210208533135,0,0.814824882210129,3.22515662972857,4.69380496577004,15.2430694272052,14.9967493758189,8.78101415360095,6.30540576424764,3.32197034473162,5.58091690301205,3.4411296090305,5.00786447411097,4.48412081602686,0,0,6.39293554924747,6.34654516500885,3.21101179975584,4.21962071731931,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,6.10510501201433,0.99358059645788,0.178065603667255,0.651547837414304,1.15479086080775,5.30980553359851,2.18502572539483,1.209294227859,2.82907619633847,2.06711325016541,2.76691633149535,2.06742634534577,1.45413491791002,2.49548164869305,2.52829406348653,2.10837217149998,1.03135543248187,39.4909942674394,0.540183282093931,0.646793418913773,1.92903331528433,5.32020700926821,5.70780216326626,5.43011767986999,3.04464949114599,1.64270195644597,4.02480934641258,1.98475558249466,2.80306630000516,2.74489525383039,1.80938774784468,1.90995750405018,2.1338316966858,2.91480836629851,2.59595422814714,0,0.412773735926445,0,0,0,0,0,0,0,5.72802370809068,0.474503990371703,2.84647253977588,2.05210147561422,2.50905955217362,2.18362563746178,2.42755823492677,2.31429676030941,0.523511883968059,5.83267379813068,0.621339313086926,0,0,0,0,0,0,0,0.39061315453185,0.104859344425711,0,0,0.316011120628178,1.01362607645082,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,2.0405734525369,0.665957860122194,0,1.00730769818447,11.204996453867,0.375364950902364,0.915758121336325,3.85863082342319,8.02515366456581,12.4245405375755,15.651058041244,17.7597609166213,15.9823459579629,13.7016503954128,10.5755145634558,17.550585006027,22.0657389579868,20.8445508132734,22.2636934053283,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.919217542250071,2.44471400581777,2.26638562962784,2.24643446714271,2.27427490587418,1.77435509923168,2.45214243801899,1.96647165686753,2.24088033417042,2.69946704091382,1.42888107384922,2.78122382267653,2.50781986602817,1.64834360321323,3.38557516309114,3.08582327146874,3.01708870470874,3.33810665926249,3.34296758254356,2.1645157495526,2.5384382367503,2.0122077016005,1.57841826862706,2.8518863907631,1.68342681497322,2.60997039873183,1.97008964751127,5.32000356120596,2.01417893541756,1.15743966588685,1.49886346762768,2.10538447600868,2.57845264857958,0.956441660344217,0.661774257358546,0.231867835620421
|short_description=p4@Nedd4l
}}
}}

Latest revision as of 15:13, 1 October 2015

Short description:p4@Nedd4l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nedd4l_5end
Coexpression cluster:NA
Association with transcript: 284bp_to_ENSMUST00000080418, ENSMUST00000163809, ENSMUST00000170658, NM_031881, uc008fep.2, uc008feq.2, uc008fer.2_5end
EntrezGene:Nedd4l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nedd4l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D834.31
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D520.34
cortex, neonate N30.CNhs11107.1392-42F219.69
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B221.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E813.25
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B216.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G410.93
liver, neonate N00.CNhs11117.641-24F415.73
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A316.67
liver, neonate N25.CNhs11198.1368-26H110.94
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B15.91
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A615.24
lung, embryo E18.CNhs10583.1287-20I615.00
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G839.49
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I15.83
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E411.20
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit6.12e-12122
tube3.05e-10114
digestive tract diverticulum8.02e-1023
sac8.02e-1023
exocrine gland1.31e-0925
exocrine system1.31e-0925
liver2.39e-0922
epithelial sac2.39e-0922
digestive gland2.39e-0922
epithelium of foregut-midgut junction2.39e-0922
anatomical boundary2.39e-0922
hepatobiliary system2.39e-0922
foregut-midgut junction2.39e-0922
hepatic diverticulum2.39e-0922
liver primordium2.39e-0922
septum transversum2.39e-0922
liver bud2.39e-0922
occipital lobe6.54e-0910
visual cortex6.54e-0910
neocortex6.54e-0910
trunk region element7.70e-0979
anterior neural tube3.87e-0840
regional part of forebrain1.22e-0739
forebrain1.22e-0739
future forebrain1.22e-0739
brain1.84e-0747
future brain1.84e-0747
regional part of brain4.64e-0746
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