Personal tools

FFCP PHASE1:Mm9::chr11:59476174..59476197,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=26936
|EntrezGene=26936
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q5SWZ5,P97434
|UniProt=Q5SWZ5,P97434
|association_with_transcript=165bp_to_ENSMUST00000066330,ENSMUST00000108751,ENSMUST00000116371_5end
|association_with_transcript=165bp_to_ENSMUST00000066330,ENSMUST00000108751,ENSMUST00000116371_5end
|cluster_id=chr11:59476174..59476197,+
|description=CAGE_peak_3_at_Mprip_5end
|description=CAGE_peak_3_at_Mprip_5end
|id=chr11:59476174..59476197,+
|id=chr11:59476174..59476197,+
|ontology_enrichment_celltype=CL:0000055!1.89e-08!50;CL:0002319!9.56e-08!43;CL:0000221!3.84e-07!44;CL:0000133!3.84e-07!44
|ontology_enrichment_celltype=CL:0000055!1.89e-08!50;CL:0002319!9.56e-08!43;CL:0000221!3.84e-07!44;CL:0000133!3.84e-07!44
|ontology_enrichment_celltype_v019_2=CL:0002319,5.04e-12,43;CL:0000221,1.22e-11,44;CL:0000133,1.22e-11,44;CL:0002321,2.16e-11,70;CL:0000333,3.26e-09,10;CL:0000095,3.26e-09,10;CL:0000243,3.26e-09,10;CL:0000123,3.26e-09,10;CL:0000125,3.26e-09,10;CL:0000030,3.26e-09,10;CL:0000339,3.26e-09,10;CL:0002453,4.38e-09,8;CL:0000128,1.19e-08,6;CL:0000126,1.19e-08,6;CL:0000127,1.19e-08,6;CL:0000393,7.85e-08,39;CL:0000211,7.85e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.22e-11!75;UBERON:0001016!2.22e-11!75;UBERON:0001017!1.14e-10!73;UBERON:0005743!1.14e-10!73;UBERON:0004121!1.51e-08!102;UBERON:0000924!1.51e-08!102;UBERON:0006601!1.51e-08!102;UBERON:0001049!1.53e-07!52;UBERON:0005068!1.53e-07!52;UBERON:0006241!1.53e-07!52;UBERON:0007135!1.53e-07!52;UBERON:0004111!5.72e-07!122
|ontology_enrichment_uberon=UBERON:0000073!2.22e-11!75;UBERON:0001016!2.22e-11!75;UBERON:0001017!1.14e-10!73;UBERON:0005743!1.14e-10!73;UBERON:0004121!1.51e-08!102;UBERON:0000924!1.51e-08!102;UBERON:0006601!1.51e-08!102;UBERON:0001049!1.53e-07!52;UBERON:0005068!1.53e-07!52;UBERON:0006241!1.53e-07!52;UBERON:0007135!1.53e-07!52;UBERON:0004111!5.72e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.19e-15,75;UBERON:0001017,2.51e-14,73;UBERON:0004121,2.97e-11,95;UBERON:0000924,2.97e-11,95;UBERON:0006601,2.97e-11,95;UBERON:0000073,1.31e-07,54;UBERON:0002020,7.50e-07,34;UBERON:0001049,7.93e-07,52;UBERON:0005068,7.93e-07,52;UBERON:0006241,7.93e-07,52;UBERON:0007135,7.93e-07,52
|phase1_expression=0.160148847104794,0,1.81999695755814,0.60492842261366,0,1.00727563147134,0.934450562382103,0.258246646883153,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,4.25216450755349,0.0992909512008853,0.783599367416806,0.319984845586813,0.45881856213434,0.57423196411502,0,0.861884930743556,0.570070258369122,0.504060259519861,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.125896817975577,0.811015449756117,1.46837401729345,0.782391344348039,1.52617609466313,2.41654801007919,1.55543919259427,1.39986421625363,2.87505128729943,0,0,0,2.05807548828758,0.573066879877513,1.54701627683233,0.809265843438391,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.898800331555214,2.30530983192933,0.622137673850866,0.405017814995072,0.630974884054146,0.856952953211411,1.32521124570968,0.489963196859816,0.766763768145891,0.919218786610021,2.20231761998777,2.042997409363,0.307213066512487,0.263772575460388,0.457438218012048,0,0,2.25105044012672,1.37518422999129,1.76777151284201,1.99320353118744,0.931997229126503,0.832988126665025,1.058001841495,0.579728977403356,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0.842666520790511,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.593768556259299,0,0.304465478312141,0,0,0.117588707135705,0.628332956648377,0.988779870937496,0.578397427679647,0,0.970601099684455,0.662524555381181,0,0,0.292780797011547,1.67557365450764,0.255457055208591,0.239630249011841,0,0,0.748953197024114,0.915001205637253,1.38219787324151,0.869121600961382,0.767146371990992,1.66230435647648,0.973447578406546,0.407357455401265,0.373220911830279,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.540186389416048,0.452114453507145,0.340182495756639,0.512454881139399,0.468508622798644,0.517406741478031,0.646703978798527,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0.284163499395593,0,0,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.493679549740441,0.164167464079095,0.729619285912702,0.438599962275997,0.878200461164203,0.805238512562231,1.05144974282064,0.720332286654991,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.889512175379481,1.14135375667535,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.779856348476481,0,0.216138049874694,0.398282546508734,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.631222379012867,0.822074982615345,0.738050739898011,0.627994911365499,0.863780147452604,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.810676133875177,0,2.87536413054709,0.372140947668503,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.739012760666419,0,0.162964976442026,0.339490171550376,0.704070744865506,0.502518772325447,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,0.478364305972461,0.983179888294428,0.863424909329478,1.15719246865209,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.468846746368813,0.491804836130026,0.252470927204373,0,0.780877488593277,0.215423397732799,0,1.11399337041197,0.283076530788832,0,1.16902343164525,1.18586333383957,2.24924921495265,0.709700426041343,0.534196811001766,0.81443479676788,0.659880491890142,0,0,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.886701168211368,0.356737635204141,0.822745103010605,0.913394847343798,0.23467170806371,0.847328283455281,0.441056796109924,0.32977250588296,0.161464426695906,0.482503399425247,0.238744688006273,0.328281799490123,0,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0.674321731924103,0.743881101528023,0,0.518459893167171,1.24267862617385,18.0381740378941,0.448549638131936,0.165458490457098,0,0.645799117388655,0.168956125490778,0.234714477291508,0.781226309063701,0.104859344425711,3.38217769156408,8.92893019399383,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.738447635872886,0.100966449948148,0.228620419965,0,0.194915761479505,0.192423683280659,0.584384510907845,0.453460767230423,0,0.179427713218951,0.671538465456314,0.965947970160952,0.187682475451182,0.549454872801795,0.857473516316263,0.501572104035363,0,1.38097570952153,0,1.03111909406213,0,1.5107877947794,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.888986911206461,0.206035057238894,0,1.01078884705519,0,0.565879024158229,0.468207537349412,0.512201219238954,0.574354689556133,0.476293691283074,0.695305955669133,0,0.412085900803307,0.588795680537589,0,0.532427418478012,0.476872379894642,0.290692833264657,0.282328141245992,0.761531471025089,1.09756783723664,1.05227884575137,0.135804113845862,1.12228454331548,0.949080144993393,0.29551344712669,0.409231043169689,0.619747364743864,0.578719832943424,0.749431733813838,0.233931608445408,0.429742108096597,0.765153328275374,0.661774257358546,0
|phase1_expression=0.160148847104794,0,1.81999695755814,0.60492842261366,0,1.00727563147134,0.934450562382103,0.258246646883153,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,4.25216450755349,0.0992909512008853,0.783599367416806,0.319984845586813,0.45881856213434,0.57423196411502,0,0.861884930743556,0.570070258369122,0.504060259519861,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.125896817975577,0.811015449756117,1.46837401729345,0.782391344348039,1.52617609466313,2.41654801007919,1.55543919259427,1.39986421625363,2.87505128729943,0,0,0,2.05807548828758,0.573066879877513,1.54701627683233,0.809265843438391,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.898800331555214,2.30530983192933,0.622137673850866,0.405017814995072,0.630974884054146,0.856952953211411,1.32521124570968,0.489963196859816,0.766763768145891,0.919218786610021,2.20231761998777,2.042997409363,0.307213066512487,0.263772575460388,0.457438218012048,0,0,2.25105044012672,1.37518422999129,1.76777151284201,1.99320353118744,0.931997229126503,0.832988126665025,1.058001841495,0.579728977403356,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0.842666520790511,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.593768556259299,0,0.304465478312141,0,0,0.117588707135705,0.628332956648377,0.988779870937496,0.578397427679647,0,0.970601099684455,0.662524555381181,0,0,0.292780797011547,1.67557365450764,0.255457055208591,0.239630249011841,0,0,0.748953197024114,0.915001205637253,1.38219787324151,0.869121600961382,0.767146371990992,1.66230435647648,0.973447578406546,0.407357455401265,0.373220911830279,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.540186389416048,0.452114453507145,0.340182495756639,0.512454881139399,0.468508622798644,0.517406741478031,0.646703978798527,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0.284163499395593,0,0,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.493679549740441,0.164167464079095,0.729619285912702,0.438599962275997,0.878200461164203,0.805238512562231,1.05144974282064,0.720332286654991,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.889512175379481,1.14135375667535,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.779856348476481,0,0.216138049874694,0.398282546508734,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.631222379012867,0.822074982615345,0.738050739898011,0.627994911365499,0.863780147452604,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.810676133875177,0,2.87536413054709,0.372140947668503,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.739012760666419,0,0.162964976442026,0.339490171550376,0.704070744865506,0.502518772325447,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,0.478364305972461,0.983179888294428,0.863424909329478,1.15719246865209,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.468846746368813,0.491804836130026,0.252470927204373,0,0.780877488593277,0.215423397732799,0,1.11399337041197,0.283076530788832,0,1.16902343164525,1.18586333383957,2.24924921495265,0.709700426041343,0.534196811001766,0.81443479676788,0.659880491890142,0,0,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.886701168211368,0.356737635204141,0.822745103010605,0.913394847343798,0.23467170806371,0.847328283455281,0.441056796109924,0.32977250588296,0.161464426695906,0.482503399425247,0.238744688006273,0.328281799490123,0,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0.674321731924103,0.743881101528023,0,0.518459893167171,1.24267862617385,18.0381740378941,0.448549638131936,0.165458490457098,0,0.645799117388655,0.168956125490778,0.234714477291508,0.781226309063701,0.104859344425711,3.38217769156408,8.92893019399383,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.738447635872886,0.100966449948148,0.228620419965,0,0.194915761479505,0.192423683280659,0.584384510907845,0.453460767230423,0,0.179427713218951,0.671538465456314,0.965947970160952,0.187682475451182,0.549454872801795,0.857473516316263,0.501572104035363,0,1.38097570952153,0,1.03111909406213,0,1.5107877947794,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.888986911206461,0.206035057238894,0,1.01078884705519,0,0.565879024158229,0.468207537349412,0.512201219238954,0.574354689556133,0.476293691283074,0.695305955669133,0,0.412085900803307,0.588795680537589,0,0.532427418478012,0.476872379894642,0.290692833264657,0.282328141245992,0.761531471025089,1.09756783723664,1.05227884575137,0.135804113845862,1.12228454331548,0.949080144993393,0.29551344712669,0.409231043169689,0.619747364743864,0.578719832943424,0.749431733813838,0.233931608445408,0.429742108096597,0.765153328275374,0.661774257358546,0
|short_description=p3@Mprip
|short_description=p3@Mprip
}}
}}

Latest revision as of 19:34, 1 October 2015

Short description:p3@Mprip
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Mprip_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 165bp_to_ENSMUST00000066330, ENSMUST00000108751, ENSMUST00000116371_5end
EntrezGene:Mprip
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Mprip

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G518.04
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system6.19e-1575
central nervous system2.51e-1473
ectoderm-derived structure2.97e-1195
ectoderm2.97e-1195
presumptive ectoderm2.97e-1195
regional part of nervous system1.31e-0754
gray matter7.50e-0734
neural tube7.93e-0752
neural rod7.93e-0752
future spinal cord7.93e-0752
neural keel7.93e-0752
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:59476174..59476197,%2B&oldid=4318645"