FFCP PHASE1:Mm9::chr11:59476174..59476197,+: Difference between revisions
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{{FFCP|EntrezGene=26936|HGNC=|MCL_coexpression_id=0|UniProt=Q5SWZ5,P97434|association_with_transcript=165bp_to_ENSMUST00000066330,ENSMUST00000108751,ENSMUST00000116371_5end|description=CAGE_peak_3_at_Mprip_5end|id=chr11:59476174..59476197,+|ontology_enrichment_celltype=CL:0000055!1.89e-08!50;CL:0002319!9.56e-08!43;CL:0000221!3.84e-07!44;CL:0000133!3.84e-07!44|ontology_enrichment_celltype_v019_2=CL:0002319,5.04e-12,43;CL:0000221,1.22e-11,44;CL:0000133,1.22e-11,44;CL:0002321,2.16e-11,70;CL:0000333,3.26e-09,10;CL:0000095,3.26e-09,10;CL:0000243,3.26e-09,10;CL:0000123,3.26e-09,10;CL:0000125,3.26e-09,10;CL:0000030,3.26e-09,10;CL:0000339,3.26e-09,10;CL:0002453,4.38e-09,8;CL:0000128,1.19e-08,6;CL:0000126,1.19e-08,6;CL:0000127,1.19e-08,6;CL:0000393,7.85e-08,39;CL:0000211,7.85e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.22e-11!75;UBERON:0001016!2.22e-11!75;UBERON:0001017!1.14e-10!73;UBERON:0005743!1.14e-10!73;UBERON:0004121!1.51e-08!102;UBERON:0000924!1.51e-08!102;UBERON:0006601!1.51e-08!102;UBERON:0001049!1.53e-07!52;UBERON:0005068!1.53e-07!52;UBERON:0006241!1.53e-07!52;UBERON:0007135!1.53e-07!52;UBERON:0004111!5.72e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.19e-15,75;UBERON:0001017,2.51e-14,73;UBERON:0004121,2.97e-11,95;UBERON:0000924,2.97e-11,95;UBERON:0006601,2.97e-11,95;UBERON:0000073,1.31e-07,54;UBERON:0002020,7.50e-07,34;UBERON:0001049,7.93e-07,52;UBERON:0005068,7.93e-07,52;UBERON:0006241,7.93e-07,52;UBERON:0007135,7.93e-07,52|phase1_expression=0.160148847104794,0,1.81999695755814,0.60492842261366,0,1.00727563147134,0.934450562382103,0.258246646883153,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,4.25216450755349,0.0992909512008853,0.783599367416806,0.319984845586813,0.45881856213434,0.57423196411502,0,0.861884930743556,0.570070258369122,0.504060259519861,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.125896817975577,0.811015449756117,1.46837401729345,0.782391344348039,1.52617609466313,2.41654801007919,1.55543919259427,1.39986421625363,2.87505128729943,0,0,0,2.05807548828758,0.573066879877513,1.54701627683233,0.809265843438391,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.898800331555214,2.30530983192933,0.622137673850866,0.405017814995072,0.630974884054146,0.856952953211411,1.32521124570968,0.489963196859816,0.766763768145891,0.919218786610021,2.20231761998777,2.042997409363,0.307213066512487,0.263772575460388,0.457438218012048,0,0,2.25105044012672,1.37518422999129,1.76777151284201,1.99320353118744,0.931997229126503,0.832988126665025,1.058001841495,0.579728977403356,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0.842666520790511,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.593768556259299,0,0.304465478312141,0,0,0.117588707135705,0.628332956648377,0.988779870937496,0.578397427679647,0,0.970601099684455,0.662524555381181,0,0,0.292780797011547,1.67557365450764,0.255457055208591,0.239630249011841,0,0,0.748953197024114,0.915001205637253,1.38219787324151,0.869121600961382,0.767146371990992,1.66230435647648,0.973447578406546,0.407357455401265,0.373220911830279,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.540186389416048,0.452114453507145,0.340182495756639,0.512454881139399,0.468508622798644,0.517406741478031,0.646703978798527,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0.284163499395593,0,0,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.493679549740441,0.164167464079095,0.729619285912702,0.438599962275997,0.878200461164203,0.805238512562231,1.05144974282064,0.720332286654991,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.889512175379481,1.14135375667535,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.779856348476481,0,0.216138049874694,0.398282546508734,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.631222379012867,0.822074982615345,0.738050739898011,0.627994911365499,0.863780147452604,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.810676133875177,0,2.87536413054709,0.372140947668503,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.739012760666419,0,0.162964976442026,0.339490171550376,0.704070744865506,0.502518772325447,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,0.478364305972461,0.983179888294428,0.863424909329478,1.15719246865209,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.468846746368813,0.491804836130026,0.252470927204373,0,0.780877488593277,0.215423397732799,0,1.11399337041197,0.283076530788832,0,1.16902343164525,1.18586333383957,2.24924921495265,0.709700426041343,0.534196811001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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26936 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SWZ5,P97434 | |||
|association_with_transcript=165bp_to_ENSMUST00000066330,ENSMUST00000108751,ENSMUST00000116371_5end | |||
|cluster_id=chr11:59476174..59476197,+ | |||
|description=CAGE_peak_3_at_Mprip_5end | |||
|id=chr11:59476174..59476197,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.89e-08!50;CL:0002319!9.56e-08!43;CL:0000221!3.84e-07!44;CL:0000133!3.84e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.04e-12,43;CL:0000221,1.22e-11,44;CL:0000133,1.22e-11,44;CL:0002321,2.16e-11,70;CL:0000333,3.26e-09,10;CL:0000095,3.26e-09,10;CL:0000243,3.26e-09,10;CL:0000123,3.26e-09,10;CL:0000125,3.26e-09,10;CL:0000030,3.26e-09,10;CL:0000339,3.26e-09,10;CL:0002453,4.38e-09,8;CL:0000128,1.19e-08,6;CL:0000126,1.19e-08,6;CL:0000127,1.19e-08,6;CL:0000393,7.85e-08,39;CL:0000211,7.85e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.22e-11!75;UBERON:0001016!2.22e-11!75;UBERON:0001017!1.14e-10!73;UBERON:0005743!1.14e-10!73;UBERON:0004121!1.51e-08!102;UBERON:0000924!1.51e-08!102;UBERON:0006601!1.51e-08!102;UBERON:0001049!1.53e-07!52;UBERON:0005068!1.53e-07!52;UBERON:0006241!1.53e-07!52;UBERON:0007135!1.53e-07!52;UBERON:0004111!5.72e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.19e-15,75;UBERON:0001017,2.51e-14,73;UBERON:0004121,2.97e-11,95;UBERON:0000924,2.97e-11,95;UBERON:0006601,2.97e-11,95;UBERON:0000073,1.31e-07,54;UBERON:0002020,7.50e-07,34;UBERON:0001049,7.93e-07,52;UBERON:0005068,7.93e-07,52;UBERON:0006241,7.93e-07,52;UBERON:0007135,7.93e-07,52 | |||
|phase1_expression=0.160148847104794,0,1.81999695755814,0.60492842261366,0,1.00727563147134,0.934450562382103,0.258246646883153,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,4.25216450755349,0.0992909512008853,0.783599367416806,0.319984845586813,0.45881856213434,0.57423196411502,0,0.861884930743556,0.570070258369122,0.504060259519861,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.125896817975577,0.811015449756117,1.46837401729345,0.782391344348039,1.52617609466313,2.41654801007919,1.55543919259427,1.39986421625363,2.87505128729943,0,0,0,2.05807548828758,0.573066879877513,1.54701627683233,0.809265843438391,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.898800331555214,2.30530983192933,0.622137673850866,0.405017814995072,0.630974884054146,0.856952953211411,1.32521124570968,0.489963196859816,0.766763768145891,0.919218786610021,2.20231761998777,2.042997409363,0.307213066512487,0.263772575460388,0.457438218012048,0,0,2.25105044012672,1.37518422999129,1.76777151284201,1.99320353118744,0.931997229126503,0.832988126665025,1.058001841495,0.579728977403356,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0.842666520790511,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.593768556259299,0,0.304465478312141,0,0,0.117588707135705,0.628332956648377,0.988779870937496,0.578397427679647,0,0.970601099684455,0.662524555381181,0,0,0.292780797011547,1.67557365450764,0.255457055208591,0.239630249011841,0,0,0.748953197024114,0.915001205637253,1.38219787324151,0.869121600961382,0.767146371990992,1.66230435647648,0.973447578406546,0.407357455401265,0.373220911830279,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.540186389416048,0.452114453507145,0.340182495756639,0.512454881139399,0.468508622798644,0.517406741478031,0.646703978798527,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0.284163499395593,0,0,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.493679549740441,0.164167464079095,0.729619285912702,0.438599962275997,0.878200461164203,0.805238512562231,1.05144974282064,0.720332286654991,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.889512175379481,1.14135375667535,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.779856348476481,0,0.216138049874694,0.398282546508734,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.631222379012867,0.822074982615345,0.738050739898011,0.627994911365499,0.863780147452604,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.810676133875177,0,2.87536413054709,0.372140947668503,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.739012760666419,0,0.162964976442026,0.339490171550376,0.704070744865506,0.502518772325447,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,0.478364305972461,0.983179888294428,0.863424909329478,1.15719246865209,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.468846746368813,0.491804836130026,0.252470927204373,0,0.780877488593277,0.215423397732799,0,1.11399337041197,0.283076530788832,0,1.16902343164525,1.18586333383957,2.24924921495265,0.709700426041343,0.534196811001766,0.81443479676788,0.659880491890142,0,0,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.886701168211368,0.356737635204141,0.822745103010605,0.913394847343798,0.23467170806371,0.847328283455281,0.441056796109924,0.32977250588296,0.161464426695906,0.482503399425247,0.238744688006273,0.328281799490123,0,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0.674321731924103,0.743881101528023,0,0.518459893167171,1.24267862617385,18.0381740378941,0.448549638131936,0.165458490457098,0,0.645799117388655,0.168956125490778,0.234714477291508,0.781226309063701,0.104859344425711,3.38217769156408,8.92893019399383,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.738447635872886,0.100966449948148,0.228620419965,0,0.194915761479505,0.192423683280659,0.584384510907845,0.453460767230423,0,0.179427713218951,0.671538465456314,0.965947970160952,0.187682475451182,0.549454872801795,0.857473516316263,0.501572104035363,0,1.38097570952153,0,1.03111909406213,0,1.5107877947794,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.888986911206461,0.206035057238894,0,1.01078884705519,0,0.565879024158229,0.4682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| |||
|short_description=p3@Mprip | |||
}} |
Latest revision as of 19:34, 1 October 2015
Short description: | p3@Mprip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mprip_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 165bp_to_ENSMUST00000066330, ENSMUST00000108751, ENSMUST00000116371_5end |
EntrezGene: | Mprip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.04e-12 | 43 |
ectodermal cell | 1.22e-11 | 44 |
neurectodermal cell | 1.22e-11 | 44 |
embryonic cell | 2.16e-11 | 70 |
migratory neural crest cell | 3.26e-09 | 10 |
neuron associated cell | 3.26e-09 | 10 |
glial cell (sensu Vertebrata) | 3.26e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 3.26e-09 | 10 |
glial cell | 3.26e-09 | 10 |
glioblast | 3.26e-09 | 10 |
glioblast (sensu Vertebrata) | 3.26e-09 | 10 |
oligodendrocyte precursor cell | 4.38e-09 | 8 |
oligodendrocyte | 1.19e-08 | 6 |
macroglial cell | 1.19e-08 | 6 |
astrocyte | 1.19e-08 | 6 |
electrically responsive cell | 7.85e-08 | 39 |
electrically active cell | 7.85e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.19e-15 | 75 |
central nervous system | 2.51e-14 | 73 |
ectoderm-derived structure | 2.97e-11 | 95 |
ectoderm | 2.97e-11 | 95 |
presumptive ectoderm | 2.97e-11 | 95 |
regional part of nervous system | 1.31e-07 | 54 |
gray matter | 7.50e-07 | 34 |
neural tube | 7.93e-07 | 52 |
neural rod | 7.93e-07 | 52 |
future spinal cord | 7.93e-07 | 52 |
neural keel | 7.93e-07 | 52 |