FF:1355-25E4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005716 | ||
|accession_numbers=CAGE;DRX009098;DRR009972;DRZ001397;DRZ002780;DRZ012747;DRZ014130 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000945,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010039,UBERON:0010317,UBERON:0001555,UBERON:0005409,UBERON:0001041 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000004,FF:0000303,FF:0000309,FF:0011493 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr1:137155026..137155042,-!p1@Elf3!1.89!422.21!Elf3;;chr5:77543897..77543911,-!p2@Hopx!1.80!116.22!Hopx;;chr1:189821714..189821761,+!p1@Esrrg!1.77!104.70!Esrrg;;chr13:55932591..55932622,-!p1@Pitx1!1.76!67.01!Pitx1;;chr13:31650185..31650201,+!p1@Foxq1!1.70!166.74!Foxq1;;chr7:19608891..19608895,-!p1@Foxa3!1.69!61.77!Foxa3;;chr2:163332558..163332596,+!p2@Hnf4a!1.68!46.33!Hnf4a;;chr4:135129538..135129558,-!p1@Grhl3!1.64!64.13!Grhl3;;chr4:87452180..87452196,-!p3@Mllt3!1.61!76.96!Mllt3;;chr2:103143336..103143367,-!p1@Ehf!1.57!57.59!Ehf;;chr17:27865882..27865901,-!p1@Spdef!1.57!35.86!Spdef;;chr12:58646974..58647003,-!p1@Foxa1!1.56!46.33!Foxa1;;chr13:48758276..48758291,+!p1@Barx1!1.47!28.27!Barx1;;chr5:77543935..77543947,-!p4@Hopx!1.46!27.75!Hopx;;chr4:87452200..87452229,-!p2@Mllt3!1.42!52.61!Mllt3;;chr2:103143315..103143328,-!p2@Ehf!1.38!22.77!Ehf;;chr14:63864056..63864102,-!p1@Gata4!1.36!37.95!Gata4;;chr14:118636214..118636235,-!p1@Sox21!1.35!25.65!Sox21;;chr11:121380640..121380655,-!p1@Zfp750!1.33!33.77!Zfp750;;chr19:5560600..5560617,-!p1@Ovol1!1.32!24.08!Ovol1;;chr3:90046995..90047031,-!p2@Creb3l4!1.31!24.34!Creb3l4;;chr9:31720843..31720888,-!p1@Barx2!1.31!21.73!Barx2;;chr16:25801993..25802014,+!p1@Trp63!1.31!19.63!Trp63;;chr13:48758358..48758415,+!p2@Barx1!1.31!19.37!Barx1;;chr13:55937432..55937460,-!p4@Pitx1!1.30!19.11!Pitx1;;chr2:180069370..180069409,-!p1@Gata5!1.28!21.20!Gata5;;chr1:120524520..120524528,+!p1@Tfcp2l1!1.23!45.55!Tfcp2l1;;chr10:22539932..22539956,-!p1@Tcf21!1.22!40.83!Tcf21;;chr6:86619104..86619119,-!p1@Mxd1!1.21!121.19!Mxd1;;chr8:59799772..59799789,+!p1@Hand2!1.21!42.93!Hand2;;chr8:123608252..123608268,+!p1@Foxf1a!1.21!22.51!Foxf1a;;chr4:55545337..55545357,-!p1@Klf4!1.20!216.21!Klf4;;chr3:29911808..29911833,-!p8@Mecom!1.17!13.87!Mecom;;chr4:133109285..133109308,+!p1@Nr0b2!1.14!12.83!Nr0b2;;chr13:55937467..55937516,-!p3@Pitx1!1.13!12.56!Pitx1;;chr10:88969376..88969395,-!p1@Nr1h4!1.12!12.04!Nr1h4;;chr14:63890491..63890516,-!p2@Gata4!1.11!11.78!Gata4;;chr5:144951153..144951203,+!p1@Bhlha15!1.10!16.75!Bhlha15;;chr12:57796615..57796687,+!p1@Pax9!1.06!10.47!Pax9;;chr18:76219118..76219155,+!p1@Zbtb7c!1.04!17.80!Zbtb7c;;chr1:189821700..189821713,+!p4@Esrrg!1.04!9.95!Esrrg;;chr2:77357622..77357704,-!p1@Zfp385b!1.03!26.70!Zfp385b;;chr13:31717548..31717596,+!p1@Foxf2!1.03!19.37!Foxf2;;chr6:97879817..97879857,+!p2@Mitf!1.03!9.68!Mitf;;chr4:87452167..87452178,-!p8@Mllt3!1.02!9.42!Mllt3;;chr16:38294860..38294924,-!p1@Nr1i2!1.02!9.42!Nr1i2;;chr11:121380594..121380609,-!p2@Zfp750!1.01!16.23!Zfp750;;chr14:63864337..63864381,-!p6@Gata4!1.01!9.16!Gata4;;chr14:118636238..118636257,-!p2@Sox21!1.01!9.16!Sox21;;chr3:30408674..30408716,-!p2@Mecom!0.99!14.66!Mecom;;chr14:63890545..63890560,-!p5@Gata4!0.98!8.64!Gata4;;chr14:63890519..63890539,-!p3@Gata4!0.98!8.64!Gata4;;chr13:55932624..55932641,-!p2@Pitx1!0.98!8.64!Pitx1;;chr13:117099847..117099907,-!p1@Isl1!0.97!15.71!Isl1;;chr14:63890459..63890484,-!p4@Gata4!0.95!7.85!Gata4;;chr12:25257265..25257294,+!p2@Grhl1!0.93!7.59!Grhl1;;chr2:133377954..133377973,+!p1@Bmp2!0.92!24.61!Bmp2;;chr2:147871627..147871641,-!p1@Foxa2!0.91!7.07!Foxa2;;chr11:69468531..69468557,+!p1@Sox15!0.91!7.07!Sox15;;chr13:40829137..40829205,-!p1@Tfap2a!0.90!7.85!Tfap2a;;chr14:99697871..99697934,+!p1@Klf5!0.89!141.87!Klf5;;chr1:194979315..194979359,+!p1@Irf6!0.89!42.93!Irf6;;chr11:96880072..96880079,+!p1@Sp6!0.89!6.81!Sp6;;chr4:148178559..148178603,+!p1@Casz1!0.87!19.11!Casz1;;chr3:34548909..34548927,+!p1@Sox2!0.87!11.26!Sox2;;chr13:72766250..72766273,+!p1@Irx2!0.87!10.21!Irx2;;chr11:121380611..121380625,-!p3@Zfp750!0.87!7.85!Zfp750;;chr11:94981424..94981439,+!p1@Dlx3!0.87!7.33!Dlx3;;chr19:5560570..5560582,-!p2@Ovol1!0.85!6.02!Ovol1;;chr14:118635860..118635885,-!p3@Sox21!0.85!6.02!Sox21;;chr18:11052642..11052659,+!p1@Gata6!0.83!31.41!Gata6;;chr4:148275237..148275311,+!p2@Casz1!0.82!24.87!Casz1;;chr4:154010918..154010931,-!p1@Prdm16!0.81!17.01!Prdm16;;chr3:30408603..30408668,-!p1@Mecom!0.81!13.35!Mecom;;chr12:25257141..25257173,+!p1@Grhl1!0.81!11.78!Grhl1;;chr6:115311030..115311065,+!p4@Pparg!0.81!8.11!Pparg;;chr4:124805061..124805087,-!p1@Zc3h12a!0.80!17.54!Zc3h12a;;chr3:30408384..30408431,-!p4@Mecom!0.80!6.81!Mecom;;chr13:31650026..31650045,+!p2@Foxq1!0.79!9.16!Foxq1;;chr2:103264245..103264268,+!p2@Elf5!0.79!5.24!Elf5;;chr18:76219161..76219176,+!p4@Zbtb7c!0.78!6.81!Zbtb7c;;chr18:11052606..11052633,+!p4@Gata6!0.77!13.09!Gata6;;chr15:81977802..81977828,+!p2@Srebf2!0.76!44.76!Srebf2;;chr15:102087880..102087927,-!p2@Rarg!0.76!11.78!Rarg;;chr10:44178521..44178557,-!p1@Prdm1!0.76!8.90!Prdm1;;chr7:146768691..146768707,-!p1@Nkx6-2!0.76!4.71!Nkx6-2;;chr19:10315179..10315241,-!p1@Gm98!0.75!53.14!Gm98;;chr2:172375081..172375105,+!p1@Tfap2c!0.74!4.45!Tfap2c;;chr3:34548946..34548972,+!p2@Sox2!0.73!4.97!Sox2;;chr2:75542527..75542590,-!p1@Nfe2l2!0.72!429.54!Nfe2l2;;chr6:51382677..51382783,+!p1@Nfe2l3!0.72!11.78!Nfe2l3;;chr15:37162796..37162828,+!p1@Grhl2!0.72!7.59!Grhl2;;chr7:2016266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hr8:13339656..13339661,+!p3@Tfdp1!0.11!1.83!Tfdp1;;chr16:43363152..43363186,+!p3@Zbtb20!0.11!1.83!Zbtb20;;chr5:145962744..145962760,-!p2@Zkscan14!0.11!1.57!Zkscan14;;chr16:43363837..43363842,+!p11@Zbtb20!0.11!1.31!Zbtb20;;chr9:19426687..19426708,+!p3@Zfp317!0.11!1.31!Zfp317;;chr5:65203599..65203617,+!p8@Klf3!0.11!1.05!Klf3;;chr15:50721211..50721234,-!p6@Trps1!0.11!1.05!Trps1;;chr14:67853457..67853482,+!p2@Ebf2!0.11!0.79!Ebf2;;chr4:63071717..63071736,-!p4@Akna!0.11!0.79!Akna;;chr6:52167513..52167549,-!p2@Hoxa7!0.11!0.79!Hoxa7;;chr6:53523346..53523353,+!p3@Creb5!0.11!0.79!Creb5;;chr6:92041506..92041517,+!p5@Nr2c2!0.11!0.79!Nr2c2;;chr18:64499706..64499721,+!p2@Onecut2!0.11!0.79!Onecut2;;chr16:30065394..30065398,+!p3@Hes1!0.11!0.79!Hes1;;chr19:23215446..23215457,+!p8@Klf9!0.11!0.52!Klf9;;chr15:61819047..61819076,+!p5@Myc!0.11!0.52!Myc;;chr9:96159427..96159432,+!p11@Tfdp2!0.11!0.52!Tfdp2;;chr11:98636321..98636332,-!p8@Nr1d1!0.11!0.52!Nr1d1;;chr10:62328027..62328038,-!p6@Tet1!0.11!0.52!Tet1;;chr1:92950099..92950109,+!p3@Lrrfip1!0.11!0.52!Lrrfip1;;chr2:56976467..56976482,-!p4@Nr4a2!0.11!0.52!Nr4a2;;chr6:52664406..52664434,+!p3@Tax1bp1!0.11!0.52!Tax1bp1;;chr6:29490887..29490891,+!p5@Irf5!0.11!0.52!Irf5;;chr5:65203575..65203589,+!p11@Klf3!0.11!0.52!Klf3;;chr4:107107175..107107204,+!p1@Glis1!0.11!0.52!Glis1;;chr8:73222830..73222844,+!p1@Jund!0.10!286.36!Jund;;chr16:15887371..15887385,+!p1@Cebpd!0.10!38.48!Cebpd;;chr8:73905806..73905876,-!p1@Nr2f6!0.10!23.30!Nr2f6;;chr1:179372411..179372509,+!p1@Zfp238!0.10!13.61!Zfp238;;chr17:84105551..84105600,+!p1@Mta3!0.10!12.04!Mta3;;chr7:4967068..4967111,+!p1@Zfp524!0.10!11.78!Zfp524;;chr18:3281034..3281104,-!p1@Crem!0.10!7.33!Crem;;chr17:28314341..28314394,+!p2@Zfp523!0.10!5.76!Zfp523;;chr5:38611639..38611698,-!p1@Zbtb49!0.10!4.97!Zbtb49;;chr13:67552527..67552574,-!p1@Zfp874a!0.10!4.19!Zfp874a;;chr9:32443818..32443854,+!p2@Ets1!0.10!4.19!Ets1;;chr17:45570455..45570479,-!p2@Cdc5l!0.10!3.40!Cdc5l;;chr15:79177964..79177986,+!p1@Maff!0.10!3.14!Maff;;chr10:126726021..126726053,-!p4@Mbd6!0.10!3.14!Mbd6;;chr13:15555496..15555544,+!p1@Gli3!0.10!3.14!Gli3;;chr5:138187181..138187192,+!p5@Tsc22d4!0.10!2.09!Tsc22d4;;chr17:13897299..13897342,+!p3@Mllt4!0.10!1.83!Mllt4;;chr5:65213356..65213412,+!p6@Klf3!0.10!1.57!Klf3;;chr6:99471044..99471066,-!p4@Foxp1!0.10!1.57!Foxp1;;chr5:104182963..104182982,+!p5@Aff1!0.10!1.57!Aff1;;chr4:48058129..48058179,+!p2@Nr4a3!0.10!1.31!Nr4a3;;chr14:56443698..56443726,+!p2@Nfatc4!0.10!1.31!Nfatc4;;chr2:127347067..127347093,-!p1@Kcnip3!0.10!1.05!Kcnip3;;chr5:3648045..3648074,-!p2@Gatad1!0.10!1.05!Gatad1;;chr8:72498017..72498059,-!p13@Gatad2a!0.10!1.05!Gatad2a;;chr19:53385060..53385069,+!p6@Mxi1!0.10!0.79!Mxi1;;chr12:32635051..32635062,-!p2@Hbp1!0.10!0.79!Hbp1;;chr13:29045274..29045293,-!p6@Sox4!0.10!0.52!Sox4;;chr1:14746065..14746079,-!p1@Msc!0.10!0.52!Msc;;chr7:52960700..52960719,+!p2@Dbp!0.10!0.52!Dbp;;chr11:90251852..90251855,-!p4@Hlf!0.10!0.52!Hlf;;chr11:69749396..69749433,+!p1@Ybx2!0.10!0.26!Ybx2;;chr11:96145537..96145556,+!p6@Hoxb7!0.10!0.26!Hoxb7;;chr11:100683794..100683805,-!p4@Stat5b!0.10!0.26!Stat5b;;chr11:70500401..70500460,-!p3@Camta2!0.10!0.26!Camta2;;chr11:69749437..69749467,+!p3@Ybx2!0.10!0.26!Ybx2;;chr11:44431115..44431132,+!p9@Ebf1!0.10!0.26!Ebf1;;chr11:96145393..96145407,+!p3@Hoxb7!0.10!0.26!Hoxb7;;chr11:23978206..23978219,+!p12@Bcl11a!0.10!0.26!Bcl11a;;chr11:78200195..78200211,-!p2@Foxn1!0.10!0.26!Foxn1;;chr10:67375342..67375365,-!p3@Zfp365!0.10!0.26!Zfp365;;chr11:23978270..23978290,+!p9@Bcl11a!0.10!0.26!Bcl11a;;chr11:96160426..96160443,+!p2@Hoxb6!0.10!0.26!Hoxb6;; | |expression_enrichment_score=chr1:137155026..137155042,-!p1@Elf3!1.89!422.21!Elf3;;chr5:77543897..77543911,-!p2@Hopx!1.80!116.22!Hopx;;chr1:189821714..189821761,+!p1@Esrrg!1.77!104.70!Esrrg;;chr13:55932591..55932622,-!p1@Pitx1!1.76!67.01!Pitx1;;chr13:31650185..31650201,+!p1@Foxq1!1.70!166.74!Foxq1;;chr7:19608891..19608895,-!p1@Foxa3!1.69!61.77!Foxa3;;chr2:163332558..163332596,+!p2@Hnf4a!1.68!46.33!Hnf4a;;chr4:135129538..135129558,-!p1@Grhl3!1.64!64.13!Grhl3;;chr4:87452180..87452196,-!p3@Mllt3!1.61!76.96!Mllt3;;chr2:103143336..103143367,-!p1@Ehf!1.57!57.59!Ehf;;chr17:27865882..27865901,-!p1@Spdef!1.57!35.86!Spdef;;chr12:58646974..58647003,-!p1@Foxa1!1.56!46.33!Foxa1;;chr13:48758276..48758291,+!p1@Barx1!1.47!28.27!Barx1;;chr5:77543935..77543947,-!p4@Hopx!1.46!27.75!Hopx;;chr4:87452200..87452229,-!p2@Mllt3!1.42!52.61!Mllt3;;chr2:103143315..103143328,-!p2@Ehf!1.38!22.77!Ehf;;chr14:63864056..63864102,-!p1@Gata4!1.36!37.95!Gata4;;chr14:118636214..118636235,-!p1@Sox21!1.35!25.65!Sox21;;chr11:121380640..121380655,-!p1@Zfp750!1.33!33.77!Zfp750;;chr19:5560600..5560617,-!p1@Ovol1!1.32!24.08!Ovol1;;chr3:90046995..90047031,-!p2@Creb3l4!1.31!24.34!Creb3l4;;chr9:31720843..31720888,-!p1@Barx2!1.31!21.73!Barx2;;chr16:25801993..25802014,+!p1@Trp63!1.31!19.63!Trp63;;chr13:48758358..48758415,+!p2@Barx1!1.31!19.37!Barx1;;chr13:55937432..55937460,-!p4@Pitx1!1.30!19.11!Pitx1;;chr2:180069370..180069409,-!p1@Gata5!1.28!21.20!Gata5;;chr1:120524520..120524528,+!p1@Tfcp2l1!1.23!45.55!Tfcp2l1;;chr10:22539932..22539956,-!p1@Tcf21!1.22!40.83!Tcf21;;chr6:86619104..86619119,-!p1@Mxd1!1.21!121.19!Mxd1;;chr8:59799772..59799789,+!p1@Hand2!1.21!42.93!Hand2;;chr8:123608252..123608268,+!p1@Foxf1a!1.21!22.51!Foxf1a;;chr4:55545337..55545357,-!p1@Klf4!1.20!216.21!Klf4;;chr3:29911808..29911833,-!p8@Mecom!1.17!13.87!Mecom;;chr4:133109285..133109308,+!p1@Nr0b2!1.14!12.83!Nr0b2;;chr13:55937467..55937516,-!p3@Pitx1!1.13!12.56!Pitx1;;chr10:88969376..88969395,-!p1@Nr1h4!1.12!12.04!Nr1h4;;chr14:63890491..63890516,-!p2@Gata4!1.11!11.78!Gata4;;chr5:144951153..144951203,+!p1@Bhlha15!1.10!16.75!Bhlha15;;chr12:57796615..57796687,+!p1@Pax9!1.06!10.47!Pax9;;chr18:76219118..76219155,+!p1@Zbtb7c!1.04!17.80!Zbtb7c;;chr1:189821700..189821713,+!p4@Esrrg!1.04!9.95!Esrrg;;chr2:77357622..77357704,-!p1@Zfp385b!1.03!26.70!Zfp385b;;chr13:31717548..31717596,+!p1@Foxf2!1.03!19.37!Foxf2;;chr6:97879817..97879857,+!p2@Mitf!1.03!9.68!Mitf;;chr4:87452167..87452178,-!p8@Mllt3!1.02!9.42!Mllt3;;chr16:38294860..38294924,-!p1@Nr1i2!1.02!9.42!Nr1i2;;chr11:121380594..121380609,-!p2@Zfp750!1.01!16.23!Zfp750;;chr14:63864337..63864381,-!p6@Gata4!1.01!9.16!Gata4;;chr14:118636238..118636257,-!p2@Sox21!1.01!9.16!Sox21;;chr3:30408674..30408716,-!p2@Mecom!0.99!14.66!Mecom;;chr14:63890545..63890560,-!p5@Gata4!0.98!8.64!Gata4;;chr14:63890519..63890539,-!p3@Gata4!0.98!8.64!Gata4;;chr13:55932624..55932641,-!p2@Pitx1!0.98!8.64!Pitx1;;chr13:117099847..117099907,-!p1@Isl1!0.97!15.71!Isl1;;chr14:63890459..63890484,-!p4@Gata4!0.95!7.85!Gata4;;chr12:25257265..25257294,+!p2@Grhl1!0.93!7.59!Grhl1;;chr2:133377954..133377973,+!p1@Bmp2!0.92!24.61!Bmp2;;chr2:147871627..147871641,-!p1@Foxa2!0.91!7.07!Foxa2;;chr11:69468531..69468557,+!p1@Sox15!0.91!7.07!Sox15;;chr13:40829137..40829205,-!p1@Tfap2a!0.90!7.85!Tfap2a;;chr14:99697871..99697934,+!p1@Klf5!0.89!141.87!Klf5;;chr1:194979315..194979359,+!p1@Irf6!0.89!42.93!Irf6;;chr11:96880072..96880079,+!p1@Sp6!0.89!6.81!Sp6;;chr4:148178559..148178603,+!p1@Casz1!0.87!19.11!Casz1;;chr3:34548909..34548927,+!p1@Sox2!0.87!11.26!Sox2;;chr13:72766250..72766273,+!p1@Irx2!0.87!10.21!Irx2;;chr11:121380611..121380625,-!p3@Zfp750!0.87!7.85!Zfp750;;chr11:94981424..94981439,+!p1@Dlx3!0.87!7.33!Dlx3;;chr19:5560570..5560582,-!p2@Ovol1!0.85!6.02!Ovol1;;chr14:118635860..118635885,-!p3@Sox21!0.85!6.02!Sox21;;chr18:11052642..11052659,+!p1@Gata6!0.83!31.41!Gata6;;chr4:148275237..148275311,+!p2@Casz1!0.82!24.87!Casz1;;chr4:154010918..154010931,-!p1@Prdm16!0.81!17.01!Prdm16;;chr3:30408603..30408668,-!p1@Mecom!0.81!13.35!Mecom;;chr12:25257141..25257173,+!p1@Grhl1!0.81!11.78!Grhl1;;chr6:115311030..115311065,+!p4@Pparg!0.81!8.11!Pparg;;chr4:124805061..124805087,-!p1@Zc3h12a!0.80!17.54!Zc3h12a;;chr3:30408384..30408431,-!p4@Mecom!0.80!6.81!Mecom;;chr13:31650026..31650045,+!p2@Foxq1!0.79!9.16!Foxq1;;chr2:103264245..103264268,+!p2@Elf5!0.79!5.24!Elf5;;chr18:76219161..76219176,+!p4@Zbtb7c!0.78!6.81!Zbtb7c;;chr18:11052606..11052633,+!p4@Gata6!0.77!13.09!Gata6;;chr15:81977802..81977828,+!p2@Srebf2!0.76!44.76!Srebf2;;chr15:102087880..102087927,-!p2@Rarg!0.76!11.78!Rarg;;chr10:44178521..44178557,-!p1@Prdm1!0.76!8.90!Prdm1;;chr7:146768691..146768707,-!p1@Nkx6-2!0.76!4.71!Nkx6-2;;chr19:10315179..10315241,-!p1@Gm98!0.75!53.14!Gm98;;chr2:172375081..172375105,+!p1@Tfap2c!0.74!4.45!Tfap2c;;chr3:34548946..34548972,+!p2@Sox2!0.73!4.97!Sox2;;chr2:75542527..75542590,-!p1@Nfe2l2!0.72!429.54!Nfe2l2;;chr6:51382677..51382783,+!p1@Nfe2l3!0.72!11.78!Nfe2l3;;chr15:37162796..37162828,+!p1@Grhl2!0.72!7.59!Grhl2;;chr7:2016266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| ||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0010316,FF:0000294 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 39: | Line 44: | ||
|is_a=EFO:0002091;;FF:0011493 | |is_a=EFO:0002091;;FF:0011493 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11104 | |||
|library_id_phase_based=2:CNhs11104 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;1355 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;1355 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/stomach%252c%2520neonate%2520N25.CNhs11104.1355-25E4.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/stomach%252c%2520neonate%2520N25.CNhs11104.1355-25E4.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/stomach%252c%2520neonate%2520N25.CNhs11104.1355-25E4.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/stomach%252c%2520neonate%2520N25.CNhs11104.1355-25E4.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/stomach%252c%2520neonate%2520N25.CNhs11104.1355-25E4.mm9.nobarcode.rdna.fa.gz | |||
|name=stomach, neonate N25 | |name=stomach, neonate N25 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 44: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11104,LSID733,release008,COMPLETED | |profile_hcage=CNhs11104,LSID733,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=0.114383331519716,0,0,0,0,0,0.195878422527787,0,0,0,0,-0.0843392403965415,0,0,0,0,0,0,-0.191893350882575,0,0,0,0.100975358632432,0,0,0,0,0,0,0,0,0,0.0853088530103566,0,0,0,0,0,0.0720904062465054,0,-0.0253923670759784,-0.425795693170007,0.288547035297468,0,0,0,0,0,0,0,0,0,0,0,0.182845846232878,0.185697830648274,0,0,0,0,0,0,0.101482362409309,0,0,0.0128495370594577,-0.004166848749449,0.0527318397483745,0.367705477031102,-0.0102322697916078,0,0.00515803474089704,0,-0.00789101514333651,0.311122885272949,0,0,-0.0834118688814169,0.26634429881404,0.0221437637925246,0,0,0,0,0,0.100975358632432,0.270665269210061,0.577173715781788,0.25466832530464,0,0,0,0,0 | |||
|rna_box=25 | |rna_box=25 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 56: | Line 73: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type= | |rna_sample_type= | ||
|rna_tube_id= | |rna_tube_id=2.50E+05 | ||
|rna_weight_ug= | |rna_weight_ug= | ||
|sample_age= | |sample_age= | ||
|sample_category=developmental | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 79: | Line 97: | ||
|top_motifs=T:2.70749889505;ZNF148:2.49835665914;HOX{A5,B5}:2.34937742684;NFE2L2:2.24010047951;TP53:2.11307242611;TFCP2:2.0241252099;MYOD1:1.92026006791;SNAI1..3:1.85801424038;FOS_FOS{B,L1}_JUN{B,D}:1.83918618532;FOSL2:1.82102043424;SRF:1.70001352316;TBP:1.54323817874;EBF1:1.52296003852;NFE2:1.5124064398;HAND1,2:1.47904444617;HMX1:1.45883588328;ZEB1:1.42570903101;TBX4,5:1.38669913438;FOXA2:1.31027474103;BACH2:1.25958667983;TLX2:1.17499403121;PAX5:1.11997654224;FOX{I1,J2}:1.10225768681;CDC5L:1.07932219238;SP1:1.0587843042;FOXN1:0.972933238219;NKX3-1:0.97252870969;NKX3-2:0.964993918821;FOXO1,3,4:0.959896095622;MYBL2:0.957615767416;XCPE1{core}:0.935085406712;TEAD1:0.929342701196;ESRRA:0.927794128388;HOXA9_MEIS1:0.880947807038;GCM1,2:0.87709447516;CRX:0.868047276524;FOX{D1,D2}:0.856277216287;TFAP4:0.798866885032;AR:0.748358437884;TLX1..3_NFIC{dimer}:0.73691968362;PPARG:0.729071675798;NR5A1,2:0.72633000014;FOXL1:0.708877226128;NKX6-1,2:0.688679863166;MAFB:0.683500075262;RXRA_VDR{dimer}:0.659251197837;FOX{F1,F2,J1}:0.623797085413;SMAD1..7,9:0.593414814158;ARID5B:0.558583312622;IKZF2:0.546417552044;TOPORS:0.506836482777;NFATC1..3:0.503500474962;HNF1A:0.449956617832;NFIX:0.440854483461;POU5F1:0.428997367478;HOX{A4,D4}:0.42536961633;NKX2-2,8:0.412137907346;FOXP1:0.392975557245;IKZF1:0.365149764629;GATA6:0.360648689962;DBP:0.355003769754;GTF2A1,2:0.343988478336;ESR1:0.335317122245;TEF:0.323589128003;ATF6:0.279128627111;CEBPA,B_DDIT3:0.274828320584;LMO2:0.230569899365;GTF2I:0.216144733672;HLF:0.193535781683;GFI1B:0.190136680591;ZNF238:0.173135591483;TFAP2{A,C}:0.163328490315;NKX2-1,4:0.155934461999;ZIC1..3:0.148968837137;ETS1,2:0.145365176533;MYFfamily:0.144032747938;IRF1,2:0.134238442902;FOXM1:0.113258115964;MEF2{A,B,C,D}:0.108773437764;NKX2-3_NKX2-5:0.099179869177;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0957964319772;MAZ:0.0919224461157;HNF4A_NR2F1,2:0.0892261499671;REST:0.0321023228537;STAT2,4,6:0.0317690174336;GLI1..3:0.0163692125788;PAX1,9:-0.00975233240378;PAX8:-0.0262310766648;TGIF1:-0.0352140119231;HIF1A:-0.0432814144703;DMAP1_NCOR{1,2}_SMARC:-0.0487022031398;TFAP2B:-0.0491465995604;LEF1_TCF7_TCF7L1,2:-0.0540959912959;ZBTB6:-0.0552239720735;VSX1,2:-0.0690206519788;EP300:-0.107450376031;HMGA1,2:-0.12764034075;NR6A1:-0.156019340771;MTF1:-0.159588612249;GFI1:-0.160513981645;FOXQ1:-0.168650657772;PITX1..3:-0.182527258112;KLF4:-0.187516637585;ELF1,2,4:-0.197857918042;IRF7:-0.198793717888;ADNP_IRX_SIX_ZHX:-0.219158998886;bHLH_family:-0.238273776363;HIC1:-0.246321385868;SPZ1:-0.25468110452;RFX2..5_RFXANK_RFXAP:-0.266682359092;POU6F1:-0.269621531285;STAT5{A,B}:-0.296174392436;MTE{core}:-0.303127235017;SOX5:-0.313975912445;LHX3,4:-0.318003388537;CDX1,2,4:-0.325023562619;NFKB1_REL_RELA:-0.327000032636;NHLH1,2:-0.33052030628;NR3C1:-0.331973501347;EGR1..3:-0.344321928603;NANOG:-0.371635832265;SPI1:-0.373974085054;RREB1:-0.39501846625;PBX1:-0.395399019784;PATZ1:-0.39838943261;PRRX1,2:-0.417008489905;STAT1,3:-0.419339642129;PRDM1:-0.436322704213;RBPJ:-0.441198361697;ALX4:-0.448179542396;HSF1,2:-0.471630058586;JUN:-0.476240158745;SREBF1,2:-0.485485636178;UFEwm:-0.496755600928;ELK1,4_GABP{A,B1}:-0.500855797851;ATF2:-0.502018915677;ATF5_CREB3:-0.506602930582;EVI1:-0.509755007031;TAL1_TCF{3,4,12}:-0.518092081685;GATA4:-0.586068557272;MED-1{core}:-0.594743500028;RUNX1..3:-0.595775993046;NFIL3:-0.620646982761;SPIB:-0.650780877482;NFE2L1:-0.662663340681;SOX17:-0.669646248694;RFX1:-0.675547282212;POU3F1..4:-0.683351033058;SOX{8,9,10}:-0.686657388845;OCT4_SOX2{dimer}:-0.692140551227;ALX1:-0.701969197553;ZBTB16:-0.707098181581;FOXD3:-0.723425761381;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.734634983011;POU2F1..3:-0.762480598316;NFY{A,B,C}:-0.764642951735;E2F1..5:-0.765505923083;BREu{core}:-0.776838429713;AIRE:-0.798955261229;ATF4:-0.810939973747;NR1H4:-0.823520913602;ZNF143:-0.826147926148;YY1:-0.835946790367;MZF1:-0.863144009666;RORA:-0.865638214135;ONECUT1,2:-0.869506625583;BPTF:-0.877229585839;MYB:-0.910958201705;CREB1:-0.932729123103;HES1:-0.996625406598;ZFP161:-1.02054939249;AHR_ARNT_ARNT2:-1.07775395506;ZNF384:-1.08254958557;PAX4:-1.10149757515;PAX2:-1.10732938682;TFDP1:-1.14037595332;SOX2:-1.17596821171;NRF1:-1.20075343886;RXR{A,B,G}:-1.20382380941;EN1,2:-1.21659588148;GZF1:-1.31758311635;PAX6:-1.35824514427;NANOG{mouse}:-1.40556796008;CUX2:-1.44112181505;ZNF423:-1.52042397149;POU1F1:-1.56885187495;PDX1:-1.62494856946;HBP1_HMGB_SSRP1_UBTF:-1.63712177755;FOXP3:-1.80332753 | |top_motifs=T:2.70749889505;ZNF148:2.49835665914;HOX{A5,B5}:2.34937742684;NFE2L2:2.24010047951;TP53:2.11307242611;TFCP2:2.0241252099;MYOD1:1.92026006791;SNAI1..3:1.85801424038;FOS_FOS{B,L1}_JUN{B,D}:1.83918618532;FOSL2:1.82102043424;SRF:1.70001352316;TBP:1.54323817874;EBF1:1.52296003852;NFE2:1.5124064398;HAND1,2:1.47904444617;HMX1:1.45883588328;ZEB1:1.42570903101;TBX4,5:1.38669913438;FOXA2:1.31027474103;BACH2:1.25958667983;TLX2:1.17499403121;PAX5:1.11997654224;FOX{I1,J2}:1.10225768681;CDC5L:1.07932219238;SP1:1.0587843042;FOXN1:0.972933238219;NKX3-1:0.97252870969;NKX3-2:0.964993918821;FOXO1,3,4:0.959896095622;MYBL2:0.957615767416;XCPE1{core}:0.935085406712;TEAD1:0.929342701196;ESRRA:0.927794128388;HOXA9_MEIS1:0.880947807038;GCM1,2:0.87709447516;CRX:0.868047276524;FOX{D1,D2}:0.856277216287;TFAP4:0.798866885032;AR:0.748358437884;TLX1..3_NFIC{dimer}:0.73691968362;PPARG:0.729071675798;NR5A1,2:0.72633000014;FOXL1:0.708877226128;NKX6-1,2:0.688679863166;MAFB:0.683500075262;RXRA_VDR{dimer}:0.659251197837;FOX{F1,F2,J1}:0.623797085413;SMAD1..7,9:0.593414814158;ARID5B:0.558583312622;IKZF2:0.546417552044;TOPORS:0.506836482777;NFATC1..3:0.503500474962;HNF1A:0.449956617832;NFIX:0.440854483461;POU5F1:0.428997367478;HOX{A4,D4}:0.42536961633;NKX2-2,8:0.412137907346;FOXP1:0.392975557245;IKZF1:0.365149764629;GATA6:0.360648689962;DBP:0.355003769754;GTF2A1,2:0.343988478336;ESR1:0.335317122245;TEF:0.323589128003;ATF6:0.279128627111;CEBPA,B_DDIT3:0.274828320584;LMO2:0.230569899365;GTF2I:0.216144733672;HLF:0.193535781683;GFI1B:0.190136680591;ZNF238:0.173135591483;TFAP2{A,C}:0.163328490315;NKX2-1,4:0.155934461999;ZIC1..3:0.148968837137;ETS1,2:0.145365176533;MYFfamily:0.144032747938;IRF1,2:0.134238442902;FOXM1:0.113258115964;MEF2{A,B,C,D}:0.108773437764;NKX2-3_NKX2-5:0.099179869177;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0957964319772;MAZ:0.0919224461157;HNF4A_NR2F1,2:0.0892261499671;REST:0.0321023228537;STAT2,4,6:0.0317690174336;GLI1..3:0.0163692125788;PAX1,9:-0.00975233240378;PAX8:-0.0262310766648;TGIF1:-0.0352140119231;HIF1A:-0.0432814144703;DMAP1_NCOR{1,2}_SMARC:-0.0487022031398;TFAP2B:-0.0491465995604;LEF1_TCF7_TCF7L1,2:-0.0540959912959;ZBTB6:-0.0552239720735;VSX1,2:-0.0690206519788;EP300:-0.107450376031;HMGA1,2:-0.12764034075;NR6A1:-0.156019340771;MTF1:-0.159588612249;GFI1:-0.160513981645;FOXQ1:-0.168650657772;PITX1..3:-0.182527258112;KLF4:-0.187516637585;ELF1,2,4:-0.197857918042;IRF7:-0.198793717888;ADNP_IRX_SIX_ZHX:-0.219158998886;bHLH_family:-0.238273776363;HIC1:-0.246321385868;SPZ1:-0.25468110452;RFX2..5_RFXANK_RFXAP:-0.266682359092;POU6F1:-0.269621531285;STAT5{A,B}:-0.296174392436;MTE{core}:-0.303127235017;SOX5:-0.313975912445;LHX3,4:-0.318003388537;CDX1,2,4:-0.325023562619;NFKB1_REL_RELA:-0.327000032636;NHLH1,2:-0.33052030628;NR3C1:-0.331973501347;EGR1..3:-0.344321928603;NANOG:-0.371635832265;SPI1:-0.373974085054;RREB1:-0.39501846625;PBX1:-0.395399019784;PATZ1:-0.39838943261;PRRX1,2:-0.417008489905;STAT1,3:-0.419339642129;PRDM1:-0.436322704213;RBPJ:-0.441198361697;ALX4:-0.448179542396;HSF1,2:-0.471630058586;JUN:-0.476240158745;SREBF1,2:-0.485485636178;UFEwm:-0.496755600928;ELK1,4_GABP{A,B1}:-0.500855797851;ATF2:-0.502018915677;ATF5_CREB3:-0.506602930582;EVI1:-0.509755007031;TAL1_TCF{3,4,12}:-0.518092081685;GATA4:-0.586068557272;MED-1{core}:-0.594743500028;RUNX1..3:-0.595775993046;NFIL3:-0.620646982761;SPIB:-0.650780877482;NFE2L1:-0.662663340681;SOX17:-0.669646248694;RFX1:-0.675547282212;POU3F1..4:-0.683351033058;SOX{8,9,10}:-0.686657388845;OCT4_SOX2{dimer}:-0.692140551227;ALX1:-0.701969197553;ZBTB16:-0.707098181581;FOXD3:-0.723425761381;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.734634983011;POU2F1..3:-0.762480598316;NFY{A,B,C}:-0.764642951735;E2F1..5:-0.765505923083;BREu{core}:-0.776838429713;AIRE:-0.798955261229;ATF4:-0.810939973747;NR1H4:-0.823520913602;ZNF143:-0.826147926148;YY1:-0.835946790367;MZF1:-0.863144009666;RORA:-0.865638214135;ONECUT1,2:-0.869506625583;BPTF:-0.877229585839;MYB:-0.910958201705;CREB1:-0.932729123103;HES1:-0.996625406598;ZFP161:-1.02054939249;AHR_ARNT_ARNT2:-1.07775395506;ZNF384:-1.08254958557;PAX4:-1.10149757515;PAX2:-1.10732938682;TFDP1:-1.14037595332;SOX2:-1.17596821171;NRF1:-1.20075343886;RXR{A,B,G}:-1.20382380941;EN1,2:-1.21659588148;GZF1:-1.31758311635;PAX6:-1.35824514427;NANOG{mouse}:-1.40556796008;CUX2:-1.44112181505;ZNF423:-1.52042397149;POU1F1:-1.56885187495;PDX1:-1.62494856946;HBP1_HMGB_SSRP1_UBTF:-1.63712177755;FOXP3:-1.80332753 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:1355-25E4;search_select_hide=table117:1355-25E4 | |||
}} | }} |
Latest revision as of 19:02, 4 June 2020
Name: | stomach, neonate N25 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs11104 |
Sample type: | developmental |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs11104
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | 0.3 |
1001 | 0.0966 |
1002 | 0.322 |
1003 | 0.0426 |
1004 | 0 |
1005 | 0.0328 |
1006 | 0.0351 |
1007 | -0.0222 |
1008 | 0 |
1009 | 0.243 |
101 | -0.0783 |
1010 | 0 |
1011 | -0.0339 |
1012 | 0 |
1013 | 0.33 |
1014 | 0 |
1015 | -0.237 |
1016 | -0.154 |
1017 | 0.252 |
1018 | 0.617 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | 0 |
1022 | 0.363 |
1023 | 0 |
1024 | 0.145 |
1025 | 0.72 |
1026 | 0 |
1027 | 7.687337e-4 |
1028 | 0 |
1029 | 0.135 |
103 | 0.216 |
1030 | 0 |
1031 | 0.0211 |
1032 | 0.271 |
1033 | -0.0665 |
1034 | 0.41 |
1035 | 0 |
1036 | -0.0983 |
1037 | 0 |
1038 | 0.121 |
1039 | 0.388 |
104 | 0 |
1040 | 0.0928 |
1041 | 0.101 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11104
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11104
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.337 |
10 | 10 | 0.903 |
100 | 100 | 0.548 |
101 | 101 | 0.847 |
102 | 102 | 0.367 |
103 | 103 | 0.177 |
104 | 104 | 0.6 |
105 | 105 | 0.26 |
106 | 106 | 0.00239 |
107 | 107 | 0.0205 |
108 | 108 | 0.785 |
109 | 109 | 0.123 |
11 | 11 | 0.579 |
110 | 110 | 0.528 |
111 | 111 | 0.267 |
112 | 112 | 0.328 |
113 | 113 | 0.815 |
114 | 114 | 0.999 |
115 | 115 | 0.797 |
116 | 116 | 0.37 |
117 | 117 | 0.716 |
118 | 118 | 0.272 |
119 | 119 | 0.0123 |
12 | 12 | 0.967 |
120 | 120 | 0.951 |
121 | 121 | 0.741 |
122 | 122 | 0.556 |
123 | 123 | 0.493 |
124 | 124 | 0.739 |
125 | 125 | 0.781 |
126 | 126 | 0.109 |
127 | 127 | 0.715 |
128 | 128 | 0.011 |
129 | 129 | 0.868 |
13 | 13 | 0.0192 |
130 | 130 | 0.978 |
131 | 131 | 0.731 |
132 | 132 | 0.775 |
133 | 133 | 0.52 |
134 | 134 | 0.724 |
135 | 135 | 0.399 |
136 | 136 | 0.503 |
137 | 137 | 0.45 |
138 | 138 | 0.294 |
139 | 139 | 0.0892 |
14 | 14 | 0.44 |
140 | 140 | 0.0781 |
141 | 141 | 0.264 |
142 | 142 | 0.979 |
143 | 143 | 0.0609 |
144 | 144 | 0.261 |
145 | 145 | 0.18 |
146 | 146 | 0.101 |
147 | 147 | 0.805 |
148 | 148 | 0.764 |
149 | 149 | 0.0199 |
15 | 15 | 0.328 |
150 | 150 | 0.351 |
151 | 151 | 0.407 |
152 | 152 | 0.00796 |
153 | 153 | 0.774 |
154 | 154 | 0.856 |
155 | 155 | 0.889 |
156 | 156 | 0.00331 |
157 | 157 | 0.135 |
158 | 158 | 0.772 |
159 | 159 | 0.934 |
160 | 160 | 0.32 |
161 | 161 | 0.486 |
162 | 162 | 0.335 |
163 | 163 | 0.939 |
164 | 164 | 0.887 |
165 | 165 | 0.394 |
166 | 166 | 0.137 |
167 | 167 | 0.37 |
168 | 168 | 0.0662 |
169 | 169 | 0.0049 |
17 | 17 | 0.028 |
18 | 18 | 0.49 |
19 | 19 | 0.1 |
2 | 2 | 0.175 |
20 | 20 | 0.286 |
21 | 21 | 0.847 |
22 | 22 | 0.243 |
23 | 23 | 0.187 |
24 | 24 | 0.119 |
25 | 25 | 0.835 |
26 | 26 | 0.0779 |
27 | 27 | 0.574 |
28 | 28 | 0.673 |
29 | 29 | 0.909 |
3 | 3 | 0.598 |
30 | 30 | 0.167 |
31 | 31 | 0.492 |
32 | 32 | 0.0159 |
33 | 33 | 0.804 |
34 | 34 | 0.537 |
35 | 35 | 0.623 |
36 | 36 | 0.548 |
37 | 37 | 0.0443 |
38 | 38 | 0.61 |
39 | 39 | 0.258 |
4 | 4 | 0.00481 |
40 | 40 | 0.587 |
41 | 41 | 0.318 |
42 | 42 | 0.859 |
43 | 43 | 0.258 |
44 | 44 | 0.592 |
45 | 45 | 0.206 |
46 | 46 | 0.316 |
47 | 47 | 0.471 |
48 | 48 | 0.606 |
49 | 49 | 0.309 |
5 | 5 | 0.527 |
50 | 50 | 0.578 |
51 | 51 | 0.543 |
52 | 52 | 0.0348 |
53 | 53 | 0.428 |
54 | 54 | 0.276 |
55 | 55 | 0.242 |
56 | 56 | 0.356 |
57 | 57 | 0.663 |
58 | 58 | 0.465 |
59 | 59 | 0.201 |
6 | 6 | 0.312 |
60 | 60 | 0.03 |
61 | 61 | 0.365 |
62 | 62 | 0.4 |
63 | 63 | 0.125 |
64 | 64 | 0.981 |
65 | 65 | 0.329 |
66 | 66 | 0.927 |
67 | 67 | 0.689 |
68 | 68 | 0.584 |
69 | 69 | 0.943 |
7 | 7 | 0.176 |
70 | 70 | 0.0455 |
71 | 71 | 0.22 |
72 | 72 | 0.73 |
73 | 73 | 0.0306 |
74 | 74 | 0.838 |
75 | 75 | 0.639 |
76 | 76 | 0.111 |
77 | 77 | 0.0164 |
78 | 78 | 0.112 |
79 | 79 | 0.635 |
8 | 8 | 0.474 |
80 | 80 | 0.506 |
81 | 81 | 0.373 |
82 | 82 | 0.159 |
83 | 83 | 0.931 |
84 | 84 | 0.517 |
85 | 85 | 0.0246 |
86 | 86 | 0.36 |
87 | 87 | 0.222 |
88 | 88 | 0.446 |
89 | 89 | 0.137 |
9 | 9 | 0.345 |
90 | 90 | 0.872 |
91 | 91 | 0.891 |
92 | 92 | 0.146 |
93 | 93 | 0.9 |
94 | 94 | 0.405 |
95 | 95 | 0.183 |
96 | 96 | 0.066 |
97 | 97 | 0.0198 |
98 | 98 | 0.674 |
99 | 99 | 0.0618 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11104
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000945 (stomach)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010039 (food storage organ)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0005409 (gastrointestinal system)
0001041 (foregut)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000309 (mouse neonate N25 sample)
0011493 (mouse stomach- neonate N25 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)