FF:688-20B8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005089 | ||
|accession_numbers=CAGE;DRX008998;DRR009872;DRZ001297;DRZ002680;DRZ012647;DRZ014030 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000160,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001555,UBERON:0005409 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000004,FF:0000303,FF:0000312,FF:0011404 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr10:80555320..80555378,-!p1@Creb3l3!2.26!206.09!Creb3l3;;chr10:88969376..88969395,-!p1@Nr1h4!2.15!141.00!Nr1h4;;chr5:148118639..148118715,-!p1@Cdx2!2.14!135.97!Cdx2;;chr3:3634145..3634161,+!p1@Hnf4g!2.09!122.40!Hnf4g;;chr2:163372884..163372904,+!p1@Hnf4a!1.82!64.59!Hnf4a;;chr16:38294860..38294924,-!p1@Nr1i2!1.81!63.84!Nr1i2;;chr1:137155026..137155042,-!p1@Elf3!1.71!279.99!Elf3;;chr2:164228702..164228719,+!p1@Rbpjl!1.67!45.49!Rbpjl;;chr2:163332558..163332596,+!p2@Hnf4a!1.50!30.41!Hnf4a;;chr10:22539932..22539956,-!p1@Tcf21!1.47!74.14!Tcf21;;chr2:180069370..180069409,-!p1@Gata5!1.43!30.16!Gata5;;chr8:77396591..77396639,+!p1@Isx!1.43!26.14!Isx;;chr10:80555398..80555409,-!p2@Creb3l3!1.42!25.13!Creb3l3;;chr19:43686789..43686811,+!p1@Nkx2-3!1.40!23.88!Nkx2-3;;chr18:61195843..61195864,-!p2@Cdx1!1.39!23.63!Cdx1;;chr14:63864056..63864102,-!p1@Gata4!1.37!38.71!Gata4;;chr18:61195865..61195880,-!p1@Cdx1!1.37!22.62!Cdx1;;chr17:27865882..27865901,-!p1@Spdef!1.32!20.11!Spdef;;chr8:77397095..77397127,+!p2@Isx!1.29!18.60!Isx;;chr9:59796270..59796294,-!p4@Nr2e3!1.29!18.35!Nr2e3;;chr2:103123925..103123959,-!p3@Ehf!1.28!17.84!Ehf;;chr4:133109285..133109308,+!p1@Nr0b2!1.27!17.59!Nr0b2;;chr7:148452314..148452329,-!p1@Irf7!1.26!115.87!Irf7;;chr1:173144100..173144138,+!p2@Nr1i3!1.26!17.09!Nr1i3;;chr1:173144144..173144176,+!p1@Nr1i3!1.24!16.34!Nr1i3;;chr3:3508024..3508069,+!p2@Hnf4g!1.23!16.09!Hnf4g;;chr8:77397492..77397514,+!p3@Isx!1.23!16.09!Isx;;chr6:64679112..64679126,+!p1@Atoh1!1.23!15.83!Atoh1;;chr3:30039329..30039355,-!p5@Mecom!1.23!15.83!Mecom;;chr8:123608252..123608268,+!p1@Foxf1a!1.22!23.12!Foxf1a;;chr9:59796330..59796350,-!p6@Nr2e3!1.19!14.58!Nr2e3;;chr2:173044380..173044432,-!p1@Zbp1!1.18!33.43!Zbp1;;chr5:148118840..148118857,-!p2@Cdx2!1.18!14.07!Cdx2;;chr18:64499706..64499721,+!p2@Onecut2!1.17!19.35!Onecut2;;chr18:64499674..64499696,+!p1@Onecut2!1.16!23.37!Onecut2;;chr13:31717548..31717596,+!p1@Foxf2!1.15!25.89!Foxf2;;chr3:94176733..94176794,+!p1@Rorc!1.13!96.26!Rorc;;chr8:59799772..59799789,+!p1@Hand2!1.13!35.94!Hand2;;chr2:103143336..103143367,-!p1@Ehf!1.13!20.11!Ehf;;chr5:115421065..115421088,-!p1@Hnf1a!1.13!12.57!Hnf1a;;chr7:19608891..19608895,-!p1@Foxa3!1.11!15.33!Foxa3;;chr11:57645506..57645523,-!p1@Hand1!1.10!11.56!Hand1;;chr9:59797525..59797538,-!p2@Nr2e3!1.10!11.56!Nr2e3;;chr7:17642177..17642223,-!p3@Hif3a!1.09!11.31!Hif3a;;chr14:99697871..99697934,+!p1@Klf5!1.08!216.65!Klf5;;chr10:44178521..44178557,-!p1@Prdm1!1.07!19.35!Prdm1;;chr8:77396650..77396662,+!p4@Isx!1.07!10.81!Isx;;chr5:148118792..148118806,-!p3@Cdx2!1.05!10.30!Cdx2;;chr18:11052485..11052508,+!p2@Gata6!1.04!28.40!Gata6;;chr10:88996336..88996380,-!p2@Nr1h4!1.02!11.81!Nr1h4;;chr3:3508005..3508021,+!p3@Hnf4g!0.99!8.80!Hnf4g;;chr9:59797503..59797513,-!p3@Nr2e3!0.98!8.55!Nr2e3;;chr6:86619104..86619119,-!p1@Mxd1!0.97!70.63!Mxd1;;chr5:135582751..135582788,+!p1@Mlxipl!0.96!33.93!Mlxipl;;chr1:194982959..194983007,+!p5@Irf6!0.96!8.04!Irf6;;chr19:53384910..53384937,+!p3@Mxi1!0.94!22.62!Mxi1;;chr10:44178375..44178390,-!p2@Prdm1!0.94!10.56!Prdm1;;chr13:55932591..55932622,-!p1@Pitx1!0.94!9.30!Pitx1;;chr2:160192793..160192809,-!p1@Mafb!0.93!116.62!Mafb;;chr1:57029281..57029326,-!p1@Satb2!0.93!11.81!Satb2;;chr2:163372869..163372882,+!p3@Hnf4a!0.93!7.54!Hnf4a;;chr5:148118614..148118625,-!p4@Cdx2!0.93!7.54!Cdx2;;chr8:118231678..118231692,-!p2@Maf!0.91!67.11!Maf;;chr6:16848443..16848459,-!p3@Tfec!0.91!7.04!Tfec;;chr1:165219345..165219366,-!p7@Prrx1!0.91!7.04!Prrx1;;chr14:63890545..63890560,-!p5@Gata4!0.91!7.04!Gata4;;chr11:83664365..83664383,+!p1@Hnf1b!0.91!7.04!Hnf1b;;chr11:98614335..98614349,+!p8@Thra!0.91!7.04!Thra;;chr1:120524520..120524528,+!p1@Tfcp2l1!0.90!20.86!Tfcp2l1;;chr3:90046995..90047031,-!p2@Creb3l4!0.90!8.80!Creb3l4;;chr2:19367259..19367278,+!p1@Ptf1a!0.89!6.79!Ptf1a;;chr10:44178493..44178520,-!p3@Prdm1!0.88!9.30!Prdm1;;chr9:59797133..59797145,-!p7@Nr2e3!0.88!6.53!Nr2e3;;chr1:194979315..194979359,+!p1@Irf6!0.87!40.97!Irf6;;chr2:77357622..77357704,-!p1@Zfp385b!0.87!17.84!Zfp385b;;chr11:96153767..96153822,+!p1@Hoxb6!0.87!10.30!Hoxb6;;chr8:123260252..123260264,+!p1@Irf8!0.83!42.98!Irf8;;chr1:138857048..138857071,-!p2@Nr5a2!0.83!5.78!Nr5a2;;chr5:120121446..120121461,+!p2@Tbx3!0.82!19.86!Tbx3;;chr8:77397190..77397202,+!p5@Isx!0.81!5.53!Isx;;chr2:103143315..103143328,-!p2@Ehf!0.81!5.53!Ehf;;chr9:59796372..59796383,-!p8@Nr2e3!0.80!5.28!Nr2e3;;chr15:97738692..97738747,-!p1@Vdr!0.79!30.66!Vdr;;chr10:44178474..44178487,-!p4@Prdm1!0.79!7.79!Prdm1;;chr7:17642053..17642066,-!p2@Hif3a!0.79!7.54!Hif3a;;chr11:53583544..53583559,+!p1@Irf1!0.78!92.99!Irf1;;chr14:63890519..63890539,-!p3@Gata4!0.78!5.03!Gata4;;chr10:80598968..80599012,+!p5@Zbtb7a!0.77!6.53!Zbtb7a;;chr6:16848395..16848416,-!p2@Tfec!0.77!5.78!Tfec;;chr12:58646974..58647003,-!p1@Foxa1!0.76!6.53!Foxa1;;chr10:127095407..127095440,+!p3@Stat6!0.76!6.03!Stat6;;chr9:59797088..59797101,-!p9@Nr2e3!0.76!4.78!Nr2e3;;chr19:6996243..6996293,-!p1@Esrra!0.75!56.55!Esrra;;chr5:120121020..120121049,+!p1@Tbx3!0.75!31.17!Tbx3;;chr13:31650185..31650201,+!p1@Foxq1!0.75!17.59!Foxq1;;chr18:11052456..11052477,+!p3@Gata6!0.75!15.58!Gata6;;chr5:144951153..144951203,+!p1@Bhlha15!0.75!7.04!Bhlha15;;chr6:52190467..52190500,-!p1@Hoxa10!0.74!4.52!Hoxa10;;chr2:180069410..180069421,-!p3@Gata5!0.74!4.52!Gata5;;chr2:153067079..153067090,-!p2@Plagl2!0.73!9.80!Plagl2;;chr19:5560600..5560617,-!p1@Ovol1!0.73!5.53!Ovol1;;chr18:11052642..11052659,+!p1@Gata6!0.72!23.88!Gata6;;chr2:79296783..79296801,-!p1@Neurod1!0.72!4.27!Neurod1;;chr6:99216375..99216395,-!p5@Foxp1!0.72!4.27!Foxp1;;chr5:67490284..67490302,-!p1@Phox2b!0.72!4.27!Phox2b;;chr2:173044357..173044377,-!p2@Zbp1!0.70!6.03!Zbp1;;chr2:180069640..180069660,-!p4@Gata5!0.70!4.02!Gata5;;chr14:63890491..63890516,-!p2@Gata4!0.70!4.02!Gata4;;chr8:118231705..118231722,-!p3@Maf!0.69!35.69!Maf;;chr2:153067138..153067147,-!p3@Plagl2!0.68!6.53!Plagl2;;chr6:115311030..115311065,+!p4@Pparg!0.68!5.78!Pparg;;chr6:52190668..52190682,-!p3@Hoxa10!0.68!3.77!Hoxa10;;chr5:148118809..148118832,-!p5@Cdx2!0.68!3.77!Cdx2;;chr12:39510206..39510249,+!p3@Etv1!0.68!3.77!Etv1;;chr6:52154414..52154462,-!p1@Hoxa5!0.67!5.28!Hoxa5;;chr11:96147952..96147967,+!p1@Hoxb7!0.67!4.78!Hoxb7;;chr1:138846009..138846038,-!p3@Nr5a2!0.67!4.27!Nr5a2;;chr11:96055613..96055628,+!p1@Hoxb13!0.66!3.52!Hoxb13;;chr7:108966820..108966835,+!p1@Phox2a!0.66!3.52!Phox2a;;chr13:31717597..31717613,+!p2@Foxf2!0.66!3.52!Foxf2;;chr2:153067094..153067130,-!p1@Plagl2!0.65!100.03!Plagl2;;chr4:55545337..55545357,-!p1@Klf4!0.65!60.32!Klf4;;chr10:79389784..79389833,+!p1@Arid3a!0.65!21.11!Arid3a;;chr2:166888058..166888105,-!p2@Znfx1!0.63!12.06!Znfx1;;chr3:128916868..128916890,+!p1@Pitx2!0.63!4.78!Pitx2;;chr2:180069423..180069434,-!p2@Gata5!0.63!3.27!Gata5;;chr1:138846079..138846103,-!p6@Nr5a2!0.63!3.27!Nr5a2;;chr19:43686882..43686906,+!p2@Nkx2-3!0.63!3.27!Nkx2-3;;chr10:61595830..61595846,+!p1@Neurog3!0.63!3.27!Neurog3;;chr8:77397026..77397036,+!p6@Isx!0.63!3.27!Isx;;chr6:99216360..99216372,-!p8@Foxp1!0.63!3.27!Foxp1;;chr5:148081686..148081715,+!p1@Pdx1!0.63!3.27!Pdx1;;chr19:6996294..6996324,-!p2@Esrra!0.62!24.88!Esrra;;chr4:154010918..154010931,-!p1@Prdm16!0.62!10.56!Prdm16;;chr13:31650026..31650045,+!p2@Foxq1!0.62!5.78!Foxq1;;chr1:194979361..194979373,+!p2@Irf6!0.62!4.52!Irf6;;chr7:17642018..17642045,-!p4@Hif3a!0.62!3.77!Hif3a;;chr10:79390075..79390115,+!p2@Arid3a!0.61!12.06!Arid3a;;chr18:11052606..11052633,+!p4@Gata6!0.60!8.55!Gata6;;chr18:36441119..36441158,+!p2@Pura!0.60!8.29!Pura;;chr12:39507680..39507715,+!p2@Etv1!0.60!6.53!Etv1;;chr17:28409136..28409150,+!p3@Ppard!0.60!3.02!Ppard;;chr2:153067445..153067460,-!p6@Plagl2!0.60!3.02!Plagl2;;chr10:79884592..79884621,-!p5@Tcf3!0.60!3.02!Tcf3;;chr6:83020355..83020371,-!p1@Tlx2!0.60!3.02!Tlx2;;chr8:79426176..79426275,+!p1@Nr3c2!0.59!17.09!Nr3c2;;chr3:89197057..89197114,-!p1@Zbtb7b!0.58!11.31!Zbtb7b;;chr15:102865131..102865151,+!p2@Hoxc4!0.58!3.27!Hoxc4;;chr2:75543089..75543122,-!p3@Nfe2l2!0.58!2.76!Nfe2l2;;chr5:42155788..42155800,-!p1@Nkx3-2!0.58!2.76!Nkx3-2;;chr1:138857076..138857105,-!p1@Nr5a2!0.58!2.76!Nr5a2;;chr11:96164821..96164865,+!p1@Hoxb5!0.58!2.76!Hoxb5;;chr1:135320962..135320981,-!p2@Sox13!0.57!10.81!Sox13;;chr12:78063146..78063159,-!p2@Max!0.57!8.29!Max;;chr2:104966766..104966786,+!p1@Wt1!0.57!4.78!Wt1;;chr2:153067233..153067236,-!p4@Plagl2!0.57!3.52!Plagl2;;chr10:44178575..44178590,-!p5@Prdm1!0.57!3.52!Prdm1;;chr2:91035254..91035271,-!p3@Nr1h3!0.57!3.52!Nr1h3;;chr16:87699237..87699279,+!p1@Bach1!0.56!34.43!Bach1;;chr1:39250584..39250643,+!p1@Npas2!0.56!16.09!Npas2;;chr2:133377954..133377973,+!p1@Bmp2!0.56!10.05!Bmp2;;chr6:39068163..39068176,-!p2@Parp12!0.56!5.53!Parp12;;chr13:37918684..37918701,+!p12@Rreb1!0.56!3.27!Rreb1;;chr10:88996295..88996335,-!p3@Nr1h4!0.56!3.27!Nr1h4;;chr8:124806048..124806094,+!p1@Zfpm1!0.55!29.15!Zfpm1;;chr4:148275237..148275311,+!p2@Casz1!0.55!12.82!Casz1;;chr4:114581497..114581519,-!p2@Foxd2!0.55!2.51!Foxd2;;chr9:59797875..59797929,-!p1@Nr2e3!0.55!2.51!Nr2e3;;chr9:74709695..74709722,+!p1@Onecut1!0.55!2.51!Onecut1;;chr18:11052516..11052525,+!p5@Gata6!0.55!2.51!Gata6;;chr6:108610610..108610676,+!p1@Bhlhe40!0.54!153.82!Bhlhe40;;chr10:30375579..30375616,-!p3@Ncoa7!0.54!6.79!Ncoa7;;chr10:126778916..126778974,-!p1@Gli1!0.53!6.28!Gli1;;chr6:52154386..52154407,-!p2@Hoxa5!0.53!3.27!Hoxa5;;chr19:53384985..53385042,+!p1@Mxi1!0.52!93.75!Mxi1;;chr15:35225845..35225867,+!p1@Osr2!0.51!6.79!Osr2;;chr1:138846047..138846074,-!p5@Nr5a2!0.51!2.51!Nr5a2;;chr6:52195795..52195825,-!p1@Hoxa11!0.51!2.26!Hoxa11;;chr7:150155143..150155156,-!p1@Ascl2!0.51!2.26!Ascl2;;chr5:115421126..115421137,-!p4@Hnf1a!0.51!2.26!Hnf1a;;chr6:16848460..16848471,-!p5@Tfec!0.51!2.26!Tfec;;chr2:74529970..74529997,+!p1@Hoxd10!0.51!2.26!Hoxd10;;chr13:55932739..55932756,-!p5@Pitx1!0.51!2.26!Pitx1;;chr15:102828658..102828678,+!p1@Hoxc6!0.51!2.26!Hoxc6;;chr9:55388997..55389016,+!p1@Isl2!0.51!2.26!Isl2;;chr14:79915425..79915501,+!p1@Elf1!0.50!25.13!Elf1;;chr1:120879128..120879183,-!p3@Gli2!0.50!4.78!Gl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521!0.13!2.01!Zfp521;;chr8:87297280..87297326,-!p2@Nfix!0.13!2.01!Nfix;;chr6:72849280..72849297,-!p6@Kcmf1!0.13!1.51!Kcmf1;;chr18:3337465..3337498,-!p6@Crem!0.13!1.51!Crem;;chr17:51951634..51951651,-!p6@Satb1!0.13!1.51!Satb1;;chr2:65683890..65683907,+!p1@Csrnp3!0.13!1.51!Csrnp3;;chr11:3189171..3189197,+!p4@Patz1!0.13!1.51!Patz1;;chr8:87324171..87324182,-!p6@Nfix!0.13!1.26!Nfix;;chr14:100684036..100684068,-!p5@Klf12!0.13!1.26!Klf12;;chr17:44873393..44873418,-!p4@Runx2!0.13!1.26!Runx2;;chr18:83079981..83080037,+!p6@Zfp516!0.13!1.26!Zfp516;;chr10:127176667..127176679,+!p2@Zbtb39!0.13!1.01!Zbtb39;;chr12:3806513..3806527,+!p9@Dnmt3a!0.13!1.01!Dnmt3a;;chr10:126723307..126723319,-!p6@Mbd6!0.13!0.75!Mbd6;;chr7:119822892..119822901,+!p7@Tead1!0.13!0.75!Tead1;;chr1:64168228..64168250,-!p7@Klf7!0.13!0.75!Klf7;;chr18:69752598..69752607,+!p26@Tcf4!0.13!0.50!Tcf4;;chr16:55838940..55838966,-!p5@Nfkbiz!0.13!0.50!Nfkbiz;;chr4:48058102..48058110,+!p5@Nr4a3!0.13!0.50!Nr4a3;;chr5:120121262..120121282,+!p6@Tbx3!0.13!0.50!Tbx3;;chr15:75578637..75578669,-!p2@Mafa!0.13!0.50!Mafa;;chr19:55816300..55816332,+!p1@Tcf7l2!0.12!55.80!Tcf7l2;;chr2:167514456..167514473,+!p1@Cebpb!0.12!52.28!Cebpb;;chr8:124900511..124900552,+!p1@Zc3h18!0.12!41.97!Zc3h18;;chr5:25004566..25004590,-!p1@Mll3!0.12!26.89!Mll3;;chr18:75527009..75527027,+!p1@Smad7!0.12!24.38!Smad7;;chr19:41557122..41557178,+!p1@Lcor!0.12!24.38!Lcor;;chr8:87502608..87502623,-!p1@Junb!0.12!18.85!Junb;;chr11:5420954..5420969,+!p2@Xbp1!0.12!14.33!Xbp1;;chr6:47827642..47827707,+!p1@Zfp282!0.12!12.06!Zfp282;;chr11:100721761..100721851,+!p1@Stat5a!0.12!8.04!Stat5a;;chr9:21420572..21420591,+!p2@Smarca4!0.12!5.78!Smarca4;;chr5:147760305..147760324,+!p2@Gtf3a!0.12!5.03!Gtf3a;;chr10:20032330..20032345,+!p3@Bclaf1!0.12!5.03!Bclaf1;;chr8:81923412..81923431,-!p2@Smad1!0.12!3.52!Smad1;;chr10:79896328..79896339,-!p3@Tcf3!0.12!3.27!Tcf3;;chr1:133904217..133904250,+!p5@Elk4!0.12!3.02!Elk4;;chr4:119960301..119960359,-!p1@Foxo6!0.12!3.02!Foxo6;;chr2:115891454..115891471,-!p3@Meis2!0.12!2.76!Meis2;;chr6:72849808..72849837,-!p4@Kcmf1!0.12!2.76!Kcmf1;;chr7:134550289..134550313,-!p1@Zfp764!0.12!2.01!Zfp764;;chr10:26093876..26093894,-!p2@L3mbtl3!0.12!2.01!L3mbtl3;;chr9:32349240..32349276,-!p2@Fli1!0.12!2.01!Fli1;;chr4:87678743..87678767,-!p7@Mllt3!0.12!2.01!Mllt3;;chr18:7004715..7004731,-!p1@Mkx!0.12!2.01!Mkx;;chr8:112229540..112229566,+!p2@Zfp821!0.12!1.76!Zfp821;;chr7:148513574..148513593,-!p5@Deaf1!0.12!1.51!Deaf1;;chr6:128250471..128250519,-!p1@Tead4!0.12!1.51!Tead4;;chr13:5860872..5860883,+!p3@Klf6!0.12!1.51!Klf6;;chr13:58501849..58501853,-!p5@Hnrnpk!0.12!1.26!Hnrnpk;;chr6:92041489..92041500,+!p4@Nr2c2!0.12!1.26!Nr2c2;;chr1:170361777..170361797,-!p10@Pbx1!0.12!1.26!Pbx1;;chr2:151969288..151969294,+!p1@Tcf15!0.12!1.01!Tcf15;;chr11:52096750..52096772,-!p4@Tcf7!0.12!1.01!Tcf7;;chr10:62327990..62328025,-!p2@Tet1!0.12!1.01!Tet1;;chr8:87237732..87237745,-!p7@Nfix!0.12!1.01!Nfix;;chr4:135840552..135840567,+!p4@Zfp46!0.12!1.01!Zfp46;;chr3:32264530..32264544,-!p2@Zmat3!0.12!1.01!Zmat3;;chrX:103070960..103070973,-!p7@Atrx!0.12!0.75!Atrx;;chr16:11176344..11176353,-!p2@Zc3h7a!0.12!0.75!Zc3h7a;;chr5:138187775..138187845,+!p7@Tsc22d4!0.12!0.75!Tsc22d4;;chr5:108494765..108494786,+!p2@Mtf2!0.12!0.75!Mtf2;;chr6:99471147..99471161,-!p9@Foxp1!0.12!0.75!Foxp1;;chr15:75799634..75799645,+!p4@Zfp707!0.12!0.50!Zfp707;;chr16:43236133..43236154,+!p17@Zbtb20!0.12!0.50!Zbtb20;;chr18:36441100..36441113,+!p3@Pura!0.12!0.50!Pura;;chr5:104183579..104183600,+!p9@Aff1!0.12!0.50!Aff1;;chr8:90328310..90328362,-!p3@Zfp423!0.12!0.50!Zfp423;;chr18:74375851..74375891,+!p1@Cxxc1!0.11!45.49!Cxxc1;;chr14:65568675..65568723,-!p1@Hmbox1!0.11!37.70!Hmbox1;;chr2:27532754..27532815,+!p1@Rxra!0.11!33.43!Rxra;;chr15:81641878..81641921,+!p1@Tef!0.11!29.91!Tef;; | |expression_enrichment_score=chr10:80555320..80555378,-!p1@Creb3l3!2.26!206.09!Creb3l3;;chr10:88969376..88969395,-!p1@Nr1h4!2.15!141.00!Nr1h4;;chr5:148118639..148118715,-!p1@Cdx2!2.14!135.97!Cdx2;;chr3:3634145..3634161,+!p1@Hnf4g!2.09!122.40!Hnf4g;;chr2:163372884..163372904,+!p1@Hnf4a!1.82!64.59!Hnf4a;;chr16:38294860..38294924,-!p1@Nr1i2!1.81!63.84!Nr1i2;;chr1:137155026..137155042,-!p1@Elf3!1.71!279.99!Elf3;;chr2:164228702..164228719,+!p1@Rbpjl!1.67!45.49!Rbpjl;;chr2:163332558..163332596,+!p2@Hnf4a!1.50!30.41!Hnf4a;;chr10:22539932..22539956,-!p1@Tcf21!1.47!74.14!Tcf21;;chr2:180069370..180069409,-!p1@Gata5!1.43!30.16!Gata5;;chr8:77396591..77396639,+!p1@Isx!1.43!26.14!Isx;;chr10:80555398..80555409,-!p2@Creb3l3!1.42!25.13!Creb3l3;;chr19:43686789..43686811,+!p1@Nkx2-3!1.40!23.88!Nkx2-3;;chr18:61195843..61195864,-!p2@Cdx1!1.39!23.63!Cdx1;;chr14:63864056..63864102,-!p1@Gata4!1.37!38.71!Gata4;;chr18:61195865..61195880,-!p1@Cdx1!1.37!22.62!Cdx1;;chr17:27865882..27865901,-!p1@Spdef!1.32!20.11!Spdef;;chr8:77397095..77397127,+!p2@Isx!1.29!18.60!Isx;;chr9:59796270..59796294,-!p4@Nr2e3!1.29!18.35!Nr2e3;;chr2:103123925..103123959,-!p3@Ehf!1.28!17.84!Ehf;;chr4:133109285..133109308,+!p1@Nr0b2!1.27!17.59!Nr0b2;;chr7:148452314..148452329,-!p1@Irf7!1.26!115.87!Irf7;;chr1:173144100..173144138,+!p2@Nr1i3!1.26!17.09!Nr1i3;;chr1:173144144..173144176,+!p1@Nr1i3!1.24!16.34!Nr1i3;;chr3:3508024..3508069,+!p2@Hnf4g!1.23!16.09!Hnf4g;;chr8:77397492..77397514,+!p3@Isx!1.23!16.09!Isx;;chr6:64679112..64679126,+!p1@Atoh1!1.23!15.83!Atoh1;;chr3:30039329..30039355,-!p5@Mecom!1.23!15.83!Mecom;;chr8:123608252..123608268,+!p1@Foxf1a!1.22!23.12!Foxf1a;;chr9:59796330..59796350,-!p6@Nr2e3!1.19!14.58!Nr2e3;;chr2:173044380..173044432,-!p1@Zbp1!1.18!33.43!Zbp1;;chr5:148118840..148118857,-!p2@Cdx2!1.18!14.07!Cdx2;;chr18:64499706..64499721,+!p2@Onecut2!1.17!19.35!Onecut2;;chr18:64499674..64499696,+!p1@Onecut2!1.16!23.37!Onecut2;;chr13:31717548..31717596,+!p1@Foxf2!1.15!25.89!Foxf2;;chr3:94176733..94176794,+!p1@Rorc!1.13!96.26!Rorc;;chr8:59799772..59799789,+!p1@Hand2!1.13!35.94!Hand2;;chr2:103143336..103143367,-!p1@Ehf!1.13!20.11!Ehf;;chr5:115421065..115421088,-!p1@Hnf1a!1.13!12.57!Hnf1a;;chr7:19608891..19608895,-!p1@Foxa3!1.11!15.33!Foxa3;;chr11:57645506..57645523,-!p1@Hand1!1.10!11.56!Hand1;;chr9:59797525..59797538,-!p2@Nr2e3!1.10!11.56!Nr2e3;;chr7:17642177..17642223,-!p3@Hif3a!1.09!11.31!Hif3a;;chr14:99697871..99697934,+!p1@Klf5!1.08!216.65!Klf5;;chr10:44178521..44178557,-!p1@Prdm1!1.07!19.35!Prdm1;;chr8:77396650..77396662,+!p4@Isx!1.07!10.81!Isx;;chr5:148118792..148118806,-!p3@Cdx2!1.05!10.30!Cdx2;;chr18:11052485..11052508,+!p2@Gata6!1.04!28.40!Gata6;;chr10:88996336..88996380,-!p2@Nr1h4!1.02!11.81!Nr1h4;;chr3:3508005..3508021,+!p3@Hnf4g!0.99!8.80!Hnf4g;;chr9:59797503..59797513,-!p3@Nr2e3!0.98!8.55!Nr2e3;;chr6:86619104..86619119,-!p1@Mxd1!0.97!70.63!Mxd1;;chr5:135582751..135582788,+!p1@Mlxipl!0.96!33.93!Mlxipl;;chr1:194982959..194983007,+!p5@Irf6!0.96!8.04!Irf6;;chr19:53384910..53384937,+!p3@Mxi1!0.94!22.62!Mxi1;;chr10:44178375..44178390,-!p2@Prdm1!0.94!10.56!Prdm1;;chr13:55932591..55932622,-!p1@Pitx1!0.94!9.30!Pitx1;;chr2:160192793..160192809,-!p1@Mafb!0.93!116.62!Mafb;;chr1:57029281..57029326,-!p1@Satb2!0.93!11.81!Satb2;;chr2:163372869..163372882,+!p3@Hnf4a!0.93!7.54!Hnf4a;;chr5:148118614..148118625,-!p4@Cdx2!0.93!7.54!Cdx2;;chr8:118231678..118231692,-!p2@Maf!0.91!67.11!Maf;;chr6:16848443..16848459,-!p3@Tfec!0.91!7.04!Tfec;;chr1:165219345..165219366,-!p7@Prrx1!0.91!7.04!Prrx1;;chr14:63890545..63890560,-!p5@Gata4!0.91!7.04!Gata4;;chr11:83664365..83664383,+!p1@Hnf1b!0.91!7.04!Hnf1b;;chr11:98614335..98614349,+!p8@Thra!0.91!7.04!Thra;;chr1:120524520..120524528,+!p1@Tfcp2l1!0.90!20.86!Tfcp2l1;;chr3:90046995..90047031,-!p2@Creb3l4!0.90!8.80!Creb3l4;;chr2:19367259..19367278,+!p1@Ptf1a!0.89!6.79!Ptf1a;;chr10:44178493..44178520,-!p3@Prdm1!0.88!9.30!Prdm1;;chr9:59797133..59797145,-!p7@Nr2e3!0.88!6.53!Nr2e3;;chr1:194979315..194979359,+!p1@Irf6!0.87!40.97!Irf6;;chr2:77357622..77357704,-!p1@Zfp385b!0.87!17.84!Zfp385b;;chr11:96153767..96153822,+!p1@Hoxb6!0.87!10.30!Hoxb6;;chr8:123260252..123260264,+!p1@Irf8!0.83!42.98!Irf8;;chr1:138857048..138857071,-!p2@Nr5a2!0.83!5.78!Nr5a2;;chr5:120121446..120121461,+!p2@Tbx3!0.82!19.86!Tbx3;;chr8:77397190..77397202,+!p5@Isx!0.81!5.53!Isx;;chr2:103143315..103143328,-!p2@Ehf!0.81!5.53!Ehf;;chr9:59796372..59796383,-!p8@Nr2e3!0.80!5.28!Nr2e3;;chr15:97738692..97738747,-!p1@Vdr!0.79!30.66!Vdr;;chr10:44178474..44178487,-!p4@Prdm1!0.79!7.79!Prdm1;;chr7:17642053..17642066,-!p2@Hif3a!0.79!7.54!Hif3a;;chr11:53583544..53583559,+!p1@Irf1!0.78!92.99!Irf1;;chr14:63890519..63890539,-!p3@Gata4!0.78!5.03!Gata4;;chr10:80598968..80599012,+!p5@Zbtb7a!0.77!6.53!Zbtb7a;;chr6:16848395..16848416,-!p2@Tfec!0.77!5.78!Tfec;;chr12:58646974..58647003,-!p1@Foxa1!0.76!6.53!Foxa1;;chr10:127095407..127095440,+!p3@Stat6!0.76!6.03!Stat6;;chr9:59797088..59797101,-!p9@Nr2e3!0.76!4.78!Nr2e3;;chr19:6996243..6996293,-!p1@Esrra!0.75!56.55!Esrra;;chr5:120121020..120121049,+!p1@Tbx3!0.75!31.17!Tbx3;;chr13:31650185..31650201,+!p1@Foxq1!0.75!17.59!Foxq1;;chr18:11052456..11052477,+!p3@Gata6!0.75!15.58!Gata6;;chr5:144951153..144951203,+!p1@Bhlha15!0.75!7.04!Bhlha15;;chr6:52190467..52190500,-!p1@Hoxa10!0.74!4.52!Hoxa10;;chr2:180069410..180069421,-!p3@Gata5!0.74!4.52!Gata5;;chr2:153067079..153067090,-!p2@Plagl2!0.73!9.80!Plagl2;;chr19:5560600..5560617,-!p1@Ovol1!0.73!5.53!Ovol1;;chr18:11052642..11052659,+!p1@Gata6!0.72!23.88!Gata6;;chr2:79296783..79296801,-!p1@Neurod1!0.72!4.27!Neurod1;;chr6:99216375..99216395,-!p5@Foxp1!0.72!4.27!Foxp1;;chr5:67490284..67490302,-!p1@Phox2b!0.72!4.27!Phox2b;;chr2:173044357..173044377,-!p2@Zbp1!0.70!6.03!Zbp1;;chr2:180069640..180069660,-!p4@Gata5!0.70!4.02!Gata5;;chr14:63890491..63890516,-!p2@Gata4!0.70!4.02!Gata4;;chr8:118231705..118231722,-!p3@Maf!0.69!35.69!Maf;;chr2:153067138..153067147,-!p3@Plagl2!0.68!6.53!Plagl2;;chr6:115311030..115311065,+!p4@Pparg!0.68!5.78!Pparg;;chr6:52190668..52190682,-!p3@Hoxa10!0.68!3.77!Hoxa10;;chr5:148118809..148118832,-!p5@Cdx2!0.68!3.77!Cdx2;;chr12:39510206..39510249,+!p3@Etv1!0.68!3.77!Etv1;;chr6:52154414..52154462,-!p1@Hoxa5!0.67!5.28!Hoxa5;;chr11:96147952..96147967,+!p1@Hoxb7!0.67!4.78!Hoxb7;;chr1:138846009..138846038,-!p3@Nr5a2!0.67!4.27!Nr5a2;;chr11:96055613..96055628,+!p1@Hoxb13!0.66!3.52!Hoxb13;;chr7:108966820..108966835,+!p1@Phox2a!0.66!3.52!Phox2a;;chr13:31717597..31717613,+!p2@Foxf2!0.66!3.52!Foxf2;;chr2:153067094..153067130,-!p1@Plagl2!0.65!100.03!Plagl2;;chr4:55545337..55545357,-!p1@Klf4!0.65!60.32!Klf4;;chr10:79389784..79389833,+!p1@Arid3a!0.65!21.11!Arid3a;;chr2:166888058..166888105,-!p2@Znfx1!0.63!12.06!Znfx1;;chr3:128916868..128916890,+!p1@Pitx2!0.63!4.78!Pitx2;;chr2:180069423..180069434,-!p2@Gata5!0.63!3.27!Gata5;;chr1:138846079..138846103,-!p6@Nr5a2!0.63!3.27!Nr5a2;;chr19:43686882..43686906,+!p2@Nkx2-3!0.63!3.27!Nkx2-3;;chr10:61595830..61595846,+!p1@Neurog3!0.63!3.27!Neurog3;;chr8:77397026..77397036,+!p6@Isx!0.63!3.27!Isx;;chr6:99216360..99216372,-!p8@Foxp1!0.63!3.27!Foxp1;;chr5:148081686..148081715,+!p1@Pdx1!0.63!3.27!Pdx1;;chr19:6996294..6996324,-!p2@Esrra!0.62!24.88!Esrra;;chr4:154010918..154010931,-!p1@Prdm16!0.62!10.56!Prdm16;;chr13:31650026..31650045,+!p2@Foxq1!0.62!5.78!Foxq1;;chr1:194979361..194979373,+!p2@Irf6!0.62!4.52!Irf6;;chr7:17642018..17642045,-!p4@Hif3a!0.62!3.77!Hif3a;;chr10:79390075..79390115,+!p2@Arid3a!0.61!12.06!Arid3a;;chr18:11052606..11052633,+!p4@Gata6!0.60!8.55!Gata6;;chr18:36441119..36441158,+!p2@Pura!0.60!8.29!Pura;;chr12:39507680..39507715,+!p2@Etv1!0.60!6.53!Etv1;;chr17:28409136..28409150,+!p3@Ppard!0.60!3.02!Ppard;;chr2:153067445..153067460,-!p6@Plagl2!0.60!3.02!Plagl2;;chr10:79884592..79884621,-!p5@Tcf3!0.60!3.02!Tcf3;;chr6:83020355..83020371,-!p1@Tlx2!0.60!3.02!Tlx2;;chr8:79426176..79426275,+!p1@Nr3c2!0.59!17.09!Nr3c2;;chr3:89197057..89197114,-!p1@Zbtb7b!0.58!11.31!Zbtb7b;;chr15:102865131..102865151,+!p2@Hoxc4!0.58!3.27!Hoxc4;;chr2:75543089..75543122,-!p3@Nfe2l2!0.58!2.76!Nfe2l2;;chr5:42155788..42155800,-!p1@Nkx3-2!0.58!2.76!Nkx3-2;;chr1:138857076..138857105,-!p1@Nr5a2!0.58!2.76!Nr5a2;;chr11:96164821..96164865,+!p1@Hoxb5!0.58!2.76!Hoxb5;;chr1:135320962..135320981,-!p2@Sox13!0.57!10.81!Sox13;;chr12:78063146..78063159,-!p2@Max!0.57!8.29!Max;;chr2:104966766..104966786,+!p1@Wt1!0.57!4.78!Wt1;;chr2:153067233..153067236,-!p4@Plagl2!0.57!3.52!Plagl2;;chr10:44178575..44178590,-!p5@Prdm1!0.57!3.52!Prdm1;;chr2:91035254..91035271,-!p3@Nr1h3!0.57!3.52!Nr1h3;;chr16:87699237..87699279,+!p1@Bach1!0.56!34.43!Bach1;;chr1:39250584..39250643,+!p1@Npas2!0.56!16.09!Npas2;;chr2:133377954..133377973,+!p1@Bmp2!0.56!10.05!Bmp2;;chr6:39068163..39068176,-!p2@Parp12!0.56!5.53!Parp12;;chr13:37918684..37918701,+!p12@Rreb1!0.56!3.27!Rreb1;;chr10:88996295..88996335,-!p3@Nr1h4!0.56!3.27!Nr1h4;;chr8:124806048..124806094,+!p1@Zfpm1!0.55!29.15!Zfpm1;;chr4:148275237..148275311,+!p2@Casz1!0.55!12.82!Casz1;;chr4:114581497..114581519,-!p2@Foxd2!0.55!2.51!Foxd2;;chr9:59797875..59797929,-!p1@Nr2e3!0.55!2.51!Nr2e3;;chr9:74709695..74709722,+!p1@Onecut1!0.55!2.51!Onecut1;;chr18:11052516..11052525,+!p5@Gata6!0.55!2.51!Gata6;;chr6:108610610..108610676,+!p1@Bhlhe40!0.54!153.82!Bhlhe40;;chr10:30375579..30375616,-!p3@Ncoa7!0.54!6.79!Ncoa7;;chr10:126778916..126778974,-!p1@Gli1!0.53!6.28!Gli1;;chr6:52154386..52154407,-!p2@Hoxa5!0.53!3.27!Hoxa5;;chr19:53384985..53385042,+!p1@Mxi1!0.52!93.75!Mxi1;;chr15:35225845..35225867,+!p1@Osr2!0.51!6.79!Osr2;;chr1:138846047..138846074,-!p5@Nr5a2!0.51!2.51!Nr5a2;;chr6:52195795..52195825,-!p1@Hoxa11!0.51!2.26!Hoxa11;;chr7:150155143..150155156,-!p1@Ascl2!0.51!2.26!Ascl2;;chr5:115421126..115421137,-!p4@Hnf1a!0.51!2.26!Hnf1a;;chr6:16848460..16848471,-!p5@Tfec!0.51!2.26!Tfec;;chr2:74529970..74529997,+!p1@Hoxd10!0.51!2.26!Hoxd10;;chr13:55932739..55932756,-!p5@Pitx1!0.51!2.26!Pitx1;;chr15:102828658..102828678,+!p1@Hoxc6!0.51!2.26!Hoxc6;;chr9:55388997..55389016,+!p1@Isl2!0.51!2.26!Isl2;;chr14:79915425..79915501,+!p1@Elf1!0.50!25.13!Elf1;;chr1:120879128..120879183,-!p3@Gli2!0.50!4.78!Gl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99319..67599360,-!p2@Arid5b!0.15!13.57!Arid5b;;chr11:65620712..65620729,+!p1@Zkscan6!0.15!10.05!Zkscan6;;chr11:70577930..70577985,+!p1@Zfp3!0.15!6.79!Zfp3;;chr1:170362335..170362356,-!p4@Pbx1!0.15!5.03!Pbx1;;chr2:152223441..152223465,-!p2@Sox12!0.15!4.52!Sox12;;chr7:26053413..26053439,+!p4@Cic!0.15!4.52!Cic;;chr7:17647736..17647772,-!p1@Hif3a!0.15!3.77!Hif3a;;chr17:27693546..27693557,+!p6@Hmga1!0.15!3.77!Hmga1;;chr1:52176378..52176401,+!p3@Stat1!0.15!3.02!Stat1;;chr13:64253718..64253763,-!p2@Zfp367!0.15!2.51!Zfp367;;chr14:52639709..52639753,-!p5@Zfp219!0.15!2.01!Zfp219;;chr4:45024818..45024846,-!p4@Zbtb5!0.15!1.51!Zbtb5;;chr7:56136974..56136989,-!p4@E2f8!0.15!1.26!E2f8;;chr17:27693865..27693877,+!p8@Hmga1-rs1,p9@Hmga1!0.15!1.26!Hmga1;;chr16:3872255..3872283,-!p4@Zfp597!0.15!1.01!Zfp597;;chr3:54559550..54559570,+!p4@Smad9!0.15!1.01!Smad9;;chr3:9610233..9610247,-!p4@Zfp704!0.15!1.01!Zfp704;;chr2:115891521..115891532,-!p8@Meis2!0.15!1.01!Meis2;;chr8:108583683..108583693,+!p3@Nfatc3!0.15!1.01!Nfatc3;;chr5:104182694..104182724,+!p8@Aff1!0.15!0.75!Aff1;;chr3:100773602..100773607,-!p2@Ttf2!0.15!0.75!Ttf2;;chr6:108610474..108610491,+!p5@Bhlhe40!0.15!0.75!Bhlhe40;;chr5:65213459..65213485,+!p12@Klf3!0.15!0.75!Klf3;;chr5:138187466..138187477,+!p11@Tsc22d4!0.15!0.75!Tsc22d4;;chr1:133903955..133903969,+!p10@Elk4!0.15!0.75!Elk4;;chr19:5424906..5425026,-!p1@Drap1!0.14!32.92!Drap1;;chr19:4397052..4397098,-!p1@Kdm2a!0.14!32.17!Kdm2a;;chr18:61336648..61336711,-!p1@Hmgxb3!0.14!22.87!Hmgxb3;;chr4:149943647..149943707,+!p2@Rere!0.14!22.12!Rere;;chr3:51144550..51144603,-!p2@Elf2!0.14!18.35!Elf2;;chr14:22320101..22320119,+!p1@Myst4!0.14!16.59!Myst4;;chr11:69393868..69393884,+!p2@Trp53!0.14!16.59!Trp53;;chr7:36587987..36588026,-!p1@Zfp507!0.14!15.83!Zfp507;;chr9:22112085..22112138,-!p1@Zfp810!0.14!15.08!Zfp810;;chr8:109620276..109620306,-!p2@Terf2!0.14!6.53!Terf2;;chr6:29476690..29476724,+!p1@Irf5!0.14!5.03!Irf5;;chr12:3806536..3806571,+!p3@Dnmt3a!0.14!3.77!Dnmt3a;;chr15:38230415..38230426,-!p2@Klf10!0.14!3.52!Klf10;;chr1:172797920..172797931,-!p3@Atf6!0.14!3.02!Atf6;;chr7:134519542..134519569,-!p1@Zfp747!0.14!3.02!Zfp747;;chr7:25372631..25372684,-!p1@Zfp575!0.14!3.02!Zfp575;;chr9:21875812..21875860,-!p1@Zfp653!0.14!2.76!Zfp653;;chr19:53384965..53384984,+!p4@Mxi1!0.14!2.76!Mxi1;;chr18:76401074..76401118,+!p3@Smad2!0.14!2.01!Smad2;;chr8:13339656..13339661,+!p3@Tfdp1!0.14!2.01!Tfdp1;;chr4:62626682..62626705,+!p2@Zfp618!0.14!2.01!Zfp618;;chr8:72520121..72520135,-!p12@Gatad2a!0.14!1.76!Gatad2a;;chr16:43619057..43619078,+!p8@Zbtb20!0.14!1.76!Zbtb20;;chr11:70501599..70501634,-!p2@Camta2,p2@LOC100048818!0.14!1.76!Camta2;;chr5:145962744..145962760,-!p2@Zkscan14!0.14!1.76!Zkscan14;;chr9:19426687..19426708,+!p3@Zfp317!0.14!1.51!Zfp317;;chr2:35960919..35960954,-!p1@Lhx6!0.14!1.51!Lhx6;;chr8:72498017..72498059,-!p13@Gatad2a!0.14!1.26!Gatad2a;;chr7:4946900..4946921,-!p5@Zfp579!0.14!1.26!Zfp579;;chr14:65977415..65977426,+!p6@Zfp395!0.14!1.01!Zfp395;;chr15:40486427..40486437,+!p5@Zfpm2!0.14!0.75!Zfpm2;;chr17:35031524..35031539,+!p4@Zbtb12!0.14!0.75!Zbtb12;;chr4:61869573..61869595,-!p2@Zfp37!0.14!0.75!Zfp37;;chr6:14851250..14851277,+!p4@Foxp2!0.14!0.75!Foxp2;;chr2:32219200..32219213,+!p5@Ciz1!0.14!0.75!Ciz1;;chrX:48559055..48559077,-!p6@Mbnl3!0.14!0.75!Mbnl3;;chr14:22806778..22806795,-!p5@Zfp503!0.14!0.50!Zfp503;;chr9:111020795..111020816,+!p3@Lrrfip2!0.14!0.50!Lrrfip2;;chr2:115890495..115890507,-!p16@Meis2!0.14!0.50!Meis2;;chr2:17977331..17977360,+!p11@Mllt10!0.14!0.50!Mllt10;;chr11:98603185..98603208,+!p1@Thra!0.13!74.40!Thra;;chr12:41172341..41172385,-!p1@Zfp277!0.13!41.72!Zfp277;;chr9:113840256..113840306,+!p1@Ubp1!0.13!25.38!Ubp1;;chr13:21494557..21494617,-!p1@Zkscan3!0.13!22.12!Zkscan3;;chr6:133985839..133985915,+!p1@Etv6!0.13!19.86!Etv6;;chr10:41170169..41170227,+!p1@Zbtb24!0.13!16.09!Zbtb24;;chr1:193961880..193961929,-!p1@Rcor3!0.13!12.82!Rcor3;;chr16:17531112..17531164,-!p1@Thap7!0.13!12.32!Thap7;;chr7:52471143..52471186,+!p1@Tead2!0.13!12.32!Tead2;;chr5:31504603..31504702,-!p1@Zfp513!0.13!11.81!Zfp513;;chr5:145965392..145965443,+!p1@Zkscan5!0.13!10.30!Zkscan5;;chr16:95680889..95680991,-!p1@Erg!0.13!9.30!Erg;;chr2:130120884..130120972,+!p1@Ebf4!0.13!6.28!Ebf4;;chr7:28623579..28623631,+!p1@Zfp59!0.13!5.03!Zfp59;;chr5:9160908..9160912,-!p2@Dmtf1!0.13!4.27!Dmtf1;;chr2:44968721..44968734,-!p6@Zeb2!0.13!3.77!Zeb2;;chr17:87153462..87153473,+!p3@Epas1!0.13!3.77!Epas1;;chr18:84255804..84255832,-!p2@Tshz1!0.13!3.52!Tshz1;;chr18:79306158..79306249,-!p1@Setbp1!0.13!3.27!Setbp1;;chr13:67914714..67914768,+!p1@Zfp273!0.13!3.27!Zfp273;;chr4:87678709..87678726,-!p4@Mllt3!0.13!3.02!Mllt3;;chr16:84835570..84835584,+!p4@Gabpa!0.13!3.02!Gabpa;;chr12:85534778..85534812,-!p3@C130039O16Rik!0.13!2.76!C130039O16Rik;;chr2:153475210..153475252,+!p2@Dnmt3b!0.13!2.51!Dnmt3b;;chr4:87679193..87679219,-!p5@Mllt3!0.13!2.51!Mllt3;;chr3:135354452..135354475,-!p5@Nfkb1!0.13!2.26!Nfkb1;;chr16:42907554..42907591,+!p5@Zbtb20!0.13!2.26!Zbtb20;;chr18:14130694..14130697,-!p2@Zfp521!0.13!2.01!Zfp521;;chr8:87297280..87297326,-!p2@Nfix!0.13!2.01!Nfix;;chr6:72849280..72849297,-!p6@Kcmf1!0.13!1.51!Kcmf1;;chr18:3337465..3337498,-!p6@Crem!0.13!1.51!Crem;;chr17:51951634..51951651,-!p6@Satb1!0.13!1.51!Satb1;;chr2:65683890..65683907,+!p1@Csrnp3!0.13!1.51!Csrnp3;;chr11:3189171..3189197,+!p4@Patz1!0.13!1.51!Patz1;;chr8:87324171..87324182,-!p6@Nfix!0.13!1.26!Nfix;;chr14:100684036..100684068,-!p5@Klf12!0.13!1.26!Klf12;;chr17:44873393..44873418,-!p4@Runx2!0.13!1.26!Runx2;;chr18:83079981..83080037,+!p6@Zfp516!0.13!1.26!Zfp516;;chr10:127176667..127176679,+!p2@Zbtb39!0.13!1.01!Zbtb39;;chr12:3806513..3806527,+!p9@Dnmt3a!0.13!1.01!Dnmt3a;;chr10:126723307..126723319,-!p6@Mbd6!0.13!0.75!Mbd6;;chr7:119822892..119822901,+!p7@Tead1!0.13!0.75!Tead1;;chr1:64168228..64168250,-!p7@Klf7!0.13!0.75!Klf7;;chr18:69752598..69752607,+!p26@Tcf4!0.13!0.50!Tcf4;;chr16:55838940..55838966,-!p5@Nfkbiz!0.13!0.50!Nfkbiz;;chr4:48058102..48058110,+!p5@Nr4a3!0.13!0.50!Nr4a3;;chr5:120121262..120121282,+!p6@Tbx3!0.13!0.50!Tbx3;;chr15:75578637..75578669,-!p2@Mafa!0.13!0.50!Mafa;;chr19:55816300..55816332,+!p1@Tcf7l2!0.12!55.80!Tcf7l2;;chr2:167514456..167514473,+!p1@Cebpb!0.12!52.28!Cebpb;;chr8:124900511..124900552,+!p1@Zc3h18!0.12!41.97!Zc3h18;;chr5:25004566..25004590,-!p1@Mll3!0.12!26.89!Mll3;;chr18:75527009..75527027,+!p1@Smad7!0.12!24.38!Smad7;;chr19:41557122..41557178,+!p1@Lcor!0.12!24.38!Lcor;;chr8:87502608..87502623,-!p1@Junb!0.12!18.85!Junb;;chr11:5420954..5420969,+!p2@Xbp1!0.12!14.33!Xbp1;;chr6:47827642..47827707,+!p1@Zfp282!0.12!12.06!Zfp282;;chr11:100721761..100721851,+!p1@Stat5a!0.12!8.04!Stat5a;;chr9:21420572..21420591,+!p2@Smarca4!0.12!5.78!Smarca4;;chr5:147760305..147760324,+!p2@Gtf3a!0.12!5.03!Gtf3a;;chr10:20032330..20032345,+!p3@Bclaf1!0.12!5.03!Bclaf1;;chr8:81923412..81923431,-!p2@Smad1!0.12!3.52!Smad1;;chr10:79896328..79896339,-!p3@Tcf3!0.12!3.27!Tcf3;;chr1:133904217..133904250,+!p5@Elk4!0.12!3.02!Elk4;;chr4:119960301..119960359,-!p1@Foxo6!0.12!3.02!Foxo6;;chr2:115891454..115891471,-!p3@Meis2!0.12!2.76!Meis2;;chr6:72849808..72849837,-!p4@Kcmf1!0.12!2.76!Kcmf1;;chr7:134550289..134550313,-!p1@Zfp764!0.12!2.01!Zfp764;;chr10:26093876..26093894,-!p2@L3mbtl3!0.12!2.01!L3mbtl3;;chr9:32349240..32349276,-!p2@Fli1!0.12!2.01!Fli1;;chr4:87678743..87678767,-!p7@Mllt3!0.12!2.01!Mllt3;;chr18:7004715..7004731,-!p1@Mkx!0.12!2.01!Mkx;;chr8:112229540..112229566,+!p2@Zfp821!0.12!1.76!Zfp821;;chr7:148513574..148513593,-!p5@Deaf1!0.12!1.51!Deaf1;;chr6:128250471..128250519,-!p1@Tead4!0.12!1.51!Tead4;;chr13:5860872..5860883,+!p3@Klf6!0.12!1.51!Klf6;;chr13:58501849..58501853,-!p5@Hnrnpk!0.12!1.26!Hnrnpk;;chr6:92041489..92041500,+!p4@Nr2c2!0.12!1.26!Nr2c2;;chr1:170361777..170361797,-!p10@Pbx1!0.12!1.26!Pbx1;;chr2:151969288..151969294,+!p1@Tcf15!0.12!1.01!Tcf15;;chr11:52096750..52096772,-!p4@Tcf7!0.12!1.01!Tcf7;;chr10:62327990..62328025,-!p2@Tet1!0.12!1.01!Tet1;;chr8:87237732..87237745,-!p7@Nfix!0.12!1.01!Nfix;;chr4:135840552..135840567,+!p4@Zfp46!0.12!1.01!Zfp46;;chr3:32264530..32264544,-!p2@Zmat3!0.12!1.01!Zmat3;;chrX:103070960..103070973,-!p7@Atrx!0.12!0.75!Atrx;;chr16:11176344..11176353,-!p2@Zc3h7a!0.12!0.75!Zc3h7a;;chr5:138187775..138187845,+!p7@Tsc22d4!0.12!0.75!Tsc22d4;;chr5:108494765..108494786,+!p2@Mtf2!0.12!0.75!Mtf2;;chr6:99471147..99471161,-!p9@Foxp1!0.12!0.75!Foxp1;;chr15:75799634..75799645,+!p4@Zfp707!0.12!0.50!Zfp707;;chr16:43236133..43236154,+!p17@Zbtb20!0.12!0.50!Zbtb20;;chr18:36441100..36441113,+!p3@Pura!0.12!0.50!Pura;;chr5:104183579..104183600,+!p9@Aff1!0.12!0.50!Aff1;;chr8:90328310..90328362,-!p3@Zfp423!0.12!0.50!Zfp423;;chr18:74375851..74375891,+!p1@Cxxc1!0.11!45.49!Cxxc1;;chr14:65568675..65568723,-!p1@Hmbox1!0.11!37.70!Hmbox1;;chr2:27532754..27532815,+!p1@Rxra!0.11!33.43!Rxra;;chr15:81641878..81641921,+!p1@Tef!0.11!29.91!Tef;; | ||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0010316,FF:0000294 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 39: | Line 44: | ||
|is_a=EFO:0002091;;FF:0011404 | |is_a=EFO:0002091;;FF:0011404 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11102 | |||
|library_id_phase_based=2:CNhs11102 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;688 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;688 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/intestine%252c%2520neonate%2520N06.CNhs11102.688-20B8.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/intestine%252c%2520neonate%2520N06.CNhs11102.688-20B8.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/intestine%252c%2520neonate%2520N06.CNhs11102.688-20B8.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/intestine%252c%2520neonate%2520N06.CNhs11102.688-20B8.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/intestine%252c%2520neonate%2520N06.CNhs11102.688-20B8.mm9.nobarcode.rdna.fa.gz | |||
|name=intestine, neonate N06 | |name=intestine, neonate N06 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 44: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11102,LSID733,release008,COMPLETED | |profile_hcage=CNhs11102,LSID733,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=0.130555976262395,0,0,0,0.0973736644748266,0.0343353591305002,0.305463650259534,0,0.104011857749843,0,0,0.0925244963358483,0,0,0,0,0,0,0.0521376312551465,0,0,0,0,0,0,0.244030982137721,0,0,0,0,0,0,0.397876612069852,0,0,0,0.440806233612666,0,0.0786965259964278,-0.00472904964242138,0.0307939444407406,0.140143673814262,0.333927499899497,0,0,0,0,0,0,0,0,0,0,0,0,0.374800686049225,0,0,0,0,0.201184027054846,0,-0.00868107438192615,0.0105591849904403,0.0973736644748266,0.058101525391623,0.0594739338240637,0.168014181170295,0.282715190841583,0.0914592236251797,0,0.169577240397365,0.00998025013652271,0,0.302188197538295,0,0,0.0528830042640483,0.0342441686994899,0.165199387297814,0,0,0,0,0,0,0.0973736644748266,0.246642956602867,-0.0214514296286246,0.0395415968857129,0,0,0,0 | |||
|rna_box=20 | |rna_box=20 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 59: | Line 76: | ||
|rna_weight_ug= | |rna_weight_ug= | ||
|sample_age= | |sample_age= | ||
|sample_category=developmental | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 79: | Line 97: | ||
|top_motifs=CDX1,2,4:2.65794917663;HNF4A_NR2F1,2:2.3312881256;FOXM1:2.08901985922;DMAP1_NCOR{1,2}_SMARC:1.97037617025;HNF1A:1.78296907656;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.6484692723;RXRA_VDR{dimer}:1.64717644559;SNAI1..3:1.64575752982;NR6A1:1.51992567484;GZF1:1.23867238946;IRF1,2:1.16476590559;PDX1:1.08448831481;EVI1:1.00064657853;POU1F1:0.97734040224;FOXP1:0.960906679073;ZEB1:0.957296870438;ESRRA:0.929514086461;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.901168370188;TAL1_TCF{3,4,12}:0.881634303364;SREBF1,2:0.874593041484;XCPE1{core}:0.824399868285;ATF6:0.783190208094;MYBL2:0.765906947159;TLX1..3_NFIC{dimer}:0.762391146482;TBX4,5:0.75874054611;MYOD1:0.716640369902;NR1H4:0.705536868327;FOSL2:0.675731747674;TP53:0.663066586107;ZNF423:0.654170150146;SRF:0.653705601722;ARID5B:0.644057971086;FOXA2:0.640732130309;SP1:0.610501536323;TOPORS:0.49842076427;NFIX:0.489385345588;ZNF148:0.488030848355;EN1,2:0.477911379499;TLX2:0.472664005509;NKX2-2,8:0.411820042758;FOX{D1,D2}:0.406873923624;STAT1,3:0.402589258344;TBP:0.39449444022;GATA6:0.390173661011;STAT2,4,6:0.355238404019;BPTF:0.340215606859;ESR1:0.340042516503;EBF1:0.287411231832;NKX2-1,4:0.285677080217;ADNP_IRX_SIX_ZHX:0.280842783403;TFAP4:0.258890192168;MAZ:0.258716763199;FOX{I1,J2}:0.257841162274;LMO2:0.243668512996;T:0.241627911434;IRF7:0.22208576307;RBPJ:0.203936611819;DBP:0.16979567726;AR:0.167034542863;TEAD1:0.163452770389;IKZF2:0.161717031329;POU6F1:0.142406242715;ONECUT1,2:0.133680161248;ETS1,2:0.124069942164;GFI1:0.108168343512;FOXD3:0.106702687512;GTF2A1,2:0.104448753494;FOXO1,3,4:0.0711354355655;ELF1,2,4:0.0695059587563;HAND1,2:0.0659073206121;PAX4:0.0652822412045;NKX6-1,2:0.0609091673824;FOS_FOS{B,L1}_JUN{B,D}:0.0525383460171;LEF1_TCF7_TCF7L1,2:0.0455832869886;NANOG:-0.00945653739955;ZBTB6:-0.011884637825;REST:-0.0222458966239;SPI1:-0.0223204342219;PAX6:-0.0304550020016;FOX{F1,F2,J1}:-0.0340613486274;CEBPA,B_DDIT3:-0.0354852185629;GTF2I:-0.0371266950052;CDC5L:-0.0728118664146;ZNF238:-0.0743723441273;MYFfamily:-0.0747431308243;NKX3-1:-0.0771501990616;FOXQ1:-0.0802262923674;GCM1,2:-0.0932683699915;ZNF384:-0.117677698637;GATA4:-0.131790560924;HIF1A:-0.150067280847;CUX2:-0.154727406061;GLI1..3:-0.161742060841;AIRE:-0.168265588535;PITX1..3:-0.173766327717;TFCP2:-0.178827592173;LHX3,4:-0.190703760365;JUN:-0.20549281869;FOXL1:-0.208223731384;TEF:-0.221198277344;IKZF1:-0.22487848334;E2F1..5:-0.229089723673;PBX1:-0.2350616041;MTE{core}:-0.23993872704;HBP1_HMGB_SSRP1_UBTF:-0.248790391915;RREB1:-0.270792670279;HOXA9_MEIS1:-0.286119828448;TFAP2B:-0.29280795553;SPIB:-0.32497866071;UFEwm:-0.325054394677;NKX3-2:-0.325264691797;bHLH_family:-0.341322766174;HES1:-0.346121640921;NFKB1_REL_RELA:-0.34755275508;NFIL3:-0.362173707449;PATZ1:-0.374214618352;HIC1:-0.384262958158;PRDM1:-0.399282609193;YY1:-0.402025551626;SPZ1:-0.405088974282;NR5A1,2:-0.411562182138;GFI1B:-0.411784121645;HMX1:-0.413759654208;NKX2-3_NKX2-5:-0.427345425352;OCT4_SOX2{dimer}:-0.428927484967;NANOG{mouse}:-0.429991757281;NFY{A,B,C}:-0.438923987399;MED-1{core}:-0.443865912188;NR3C1:-0.455870053741;FOXP3:-0.463798475783;RUNX1..3:-0.484435550764;ATF5_CREB3:-0.492062622789;TFAP2{A,C}:-0.503614385461;ATF2:-0.510312872038;MTF1:-0.528538653662;KLF4:-0.531145034473;ZBTB16:-0.534995680028;CREB1:-0.536497453257;BACH2:-0.536878881504;PAX2:-0.539220042528;PAX5:-0.54398293376;HMGA1,2:-0.545036570183;BREu{core}:-0.546934676108;SOX5:-0.56717143732;PRRX1,2:-0.575030931485;MYB:-0.583168534152;EGR1..3:-0.586510848146;FOXN1:-0.606000169184;VSX1,2:-0.606139195037;HSF1,2:-0.616565703594;ZFP161:-0.617832829966;MAFB:-0.620251658207;ZIC1..3:-0.626590604058;ELK1,4_GABP{A,B1}:-0.628329001079;SMAD1..7,9:-0.632563595705;POU5F1:-0.637266314799;PAX1,9:-0.645830393253;ALX1:-0.648008886184;POU3F1..4:-0.658389299938;PAX8:-0.66284073999;ALX4:-0.678484217654;STAT5{A,B}:-0.692527119071;NFE2:-0.692739850748;NHLH1,2:-0.699667397649;TGIF1:-0.726822614862;TFDP1:-0.748160005329;RFX1:-0.753949105347;MEF2{A,B,C,D}:-0.760913925569;EP300:-0.783308826099;HLF:-0.789407184443;POU2F1..3:-0.797489896787;MZF1:-0.806560912551;SOX17:-0.813129595969;CRX:-0.824622763186;NFE2L2:-0.850671763792;SOX2:-0.87383584222;NFATC1..3:-0.892432222074;RFX2..5_RFXANK_RFXAP:-0.906493200881;AHR_ARNT_ARNT2:-0.988713890582;PPARG:-1.06587415306;SOX{8,9,10}:-1.07362821211;ATF4:-1.19037004256;RXR{A,B,G}:-1.20983897526;RORA:-1.22350030097;ZNF143:-1.26965819132;NRF1:-1.28401067704;NFE2L1:-1.32137005859;HOX{A4,D4}:-1.63622865855;HOX{A5,B5}:-1.75283026579 | |top_motifs=CDX1,2,4:2.65794917663;HNF4A_NR2F1,2:2.3312881256;FOXM1:2.08901985922;DMAP1_NCOR{1,2}_SMARC:1.97037617025;HNF1A:1.78296907656;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.6484692723;RXRA_VDR{dimer}:1.64717644559;SNAI1..3:1.64575752982;NR6A1:1.51992567484;GZF1:1.23867238946;IRF1,2:1.16476590559;PDX1:1.08448831481;EVI1:1.00064657853;POU1F1:0.97734040224;FOXP1:0.960906679073;ZEB1:0.957296870438;ESRRA:0.929514086461;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.901168370188;TAL1_TCF{3,4,12}:0.881634303364;SREBF1,2:0.874593041484;XCPE1{core}:0.824399868285;ATF6:0.783190208094;MYBL2:0.765906947159;TLX1..3_NFIC{dimer}:0.762391146482;TBX4,5:0.75874054611;MYOD1:0.716640369902;NR1H4:0.705536868327;FOSL2:0.675731747674;TP53:0.663066586107;ZNF423:0.654170150146;SRF:0.653705601722;ARID5B:0.644057971086;FOXA2:0.640732130309;SP1:0.610501536323;TOPORS:0.49842076427;NFIX:0.489385345588;ZNF148:0.488030848355;EN1,2:0.477911379499;TLX2:0.472664005509;NKX2-2,8:0.411820042758;FOX{D1,D2}:0.406873923624;STAT1,3:0.402589258344;TBP:0.39449444022;GATA6:0.390173661011;STAT2,4,6:0.355238404019;BPTF:0.340215606859;ESR1:0.340042516503;EBF1:0.287411231832;NKX2-1,4:0.285677080217;ADNP_IRX_SIX_ZHX:0.280842783403;TFAP4:0.258890192168;MAZ:0.258716763199;FOX{I1,J2}:0.257841162274;LMO2:0.243668512996;T:0.241627911434;IRF7:0.22208576307;RBPJ:0.203936611819;DBP:0.16979567726;AR:0.167034542863;TEAD1:0.163452770389;IKZF2:0.161717031329;POU6F1:0.142406242715;ONECUT1,2:0.133680161248;ETS1,2:0.124069942164;GFI1:0.108168343512;FOXD3:0.106702687512;GTF2A1,2:0.104448753494;FOXO1,3,4:0.0711354355655;ELF1,2,4:0.0695059587563;HAND1,2:0.0659073206121;PAX4:0.0652822412045;NKX6-1,2:0.0609091673824;FOS_FOS{B,L1}_JUN{B,D}:0.0525383460171;LEF1_TCF7_TCF7L1,2:0.0455832869886;NANOG:-0.00945653739955;ZBTB6:-0.011884637825;REST:-0.0222458966239;SPI1:-0.0223204342219;PAX6:-0.0304550020016;FOX{F1,F2,J1}:-0.0340613486274;CEBPA,B_DDIT3:-0.0354852185629;GTF2I:-0.0371266950052;CDC5L:-0.0728118664146;ZNF238:-0.0743723441273;MYFfamily:-0.0747431308243;NKX3-1:-0.0771501990616;FOXQ1:-0.0802262923674;GCM1,2:-0.0932683699915;ZNF384:-0.117677698637;GATA4:-0.131790560924;HIF1A:-0.150067280847;CUX2:-0.154727406061;GLI1..3:-0.161742060841;AIRE:-0.168265588535;PITX1..3:-0.173766327717;TFCP2:-0.178827592173;LHX3,4:-0.190703760365;JUN:-0.20549281869;FOXL1:-0.208223731384;TEF:-0.221198277344;IKZF1:-0.22487848334;E2F1..5:-0.229089723673;PBX1:-0.2350616041;MTE{core}:-0.23993872704;HBP1_HMGB_SSRP1_UBTF:-0.248790391915;RREB1:-0.270792670279;HOXA9_MEIS1:-0.286119828448;TFAP2B:-0.29280795553;SPIB:-0.32497866071;UFEwm:-0.325054394677;NKX3-2:-0.325264691797;bHLH_family:-0.341322766174;HES1:-0.346121640921;NFKB1_REL_RELA:-0.34755275508;NFIL3:-0.362173707449;PATZ1:-0.374214618352;HIC1:-0.384262958158;PRDM1:-0.399282609193;YY1:-0.402025551626;SPZ1:-0.405088974282;NR5A1,2:-0.411562182138;GFI1B:-0.411784121645;HMX1:-0.413759654208;NKX2-3_NKX2-5:-0.427345425352;OCT4_SOX2{dimer}:-0.428927484967;NANOG{mouse}:-0.429991757281;NFY{A,B,C}:-0.438923987399;MED-1{core}:-0.443865912188;NR3C1:-0.455870053741;FOXP3:-0.463798475783;RUNX1..3:-0.484435550764;ATF5_CREB3:-0.492062622789;TFAP2{A,C}:-0.503614385461;ATF2:-0.510312872038;MTF1:-0.528538653662;KLF4:-0.531145034473;ZBTB16:-0.534995680028;CREB1:-0.536497453257;BACH2:-0.536878881504;PAX2:-0.539220042528;PAX5:-0.54398293376;HMGA1,2:-0.545036570183;BREu{core}:-0.546934676108;SOX5:-0.56717143732;PRRX1,2:-0.575030931485;MYB:-0.583168534152;EGR1..3:-0.586510848146;FOXN1:-0.606000169184;VSX1,2:-0.606139195037;HSF1,2:-0.616565703594;ZFP161:-0.617832829966;MAFB:-0.620251658207;ZIC1..3:-0.626590604058;ELK1,4_GABP{A,B1}:-0.628329001079;SMAD1..7,9:-0.632563595705;POU5F1:-0.637266314799;PAX1,9:-0.645830393253;ALX1:-0.648008886184;POU3F1..4:-0.658389299938;PAX8:-0.66284073999;ALX4:-0.678484217654;STAT5{A,B}:-0.692527119071;NFE2:-0.692739850748;NHLH1,2:-0.699667397649;TGIF1:-0.726822614862;TFDP1:-0.748160005329;RFX1:-0.753949105347;MEF2{A,B,C,D}:-0.760913925569;EP300:-0.783308826099;HLF:-0.789407184443;POU2F1..3:-0.797489896787;MZF1:-0.806560912551;SOX17:-0.813129595969;CRX:-0.824622763186;NFE2L2:-0.850671763792;SOX2:-0.87383584222;NFATC1..3:-0.892432222074;RFX2..5_RFXANK_RFXAP:-0.906493200881;AHR_ARNT_ARNT2:-0.988713890582;PPARG:-1.06587415306;SOX{8,9,10}:-1.07362821211;ATF4:-1.19037004256;RXR{A,B,G}:-1.20983897526;RORA:-1.22350030097;ZNF143:-1.26965819132;NRF1:-1.28401067704;NFE2L1:-1.32137005859;HOX{A4,D4}:-1.63622865855;HOX{A5,B5}:-1.75283026579 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:688-20B8;search_select_hide=table117:688-20B8 | |||
}} | }} |
Latest revision as of 19:19, 4 June 2020
Name: | intestine, neonate N06 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs11102 |
Sample type: | developmental |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs11102
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | 0.103 |
1001 | 0.0397 |
1002 | 0.271 |
1003 | 0.00838 |
1004 | 0 |
1005 | 0.302 |
1006 | 0.0644 |
1007 | 0.0133 |
1008 | 0.353 |
1009 | 0.12 |
101 | -0.077 |
1010 | 0.0974 |
1011 | 0 |
1012 | 0 |
1013 | 0.224 |
1014 | 0.177 |
1015 | -0.126 |
1016 | -0.0806 |
1017 | 0 |
1018 | 0.399 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | 0.0487 |
1022 | 0.0251 |
1023 | 0 |
1024 | 0.0974 |
1025 | 0.592 |
1026 | 0 |
1027 | 0 |
1028 | 0 |
1029 | 0.515 |
103 | 0.149 |
1030 | 0 |
1031 | 0.0721 |
1032 | 0.292 |
1033 | -0.0665 |
1034 | 0.0974 |
1035 | 0.177 |
1036 | -0.00598 |
1037 | 0 |
1038 | 0.0926 |
1039 | 0.00248 |
104 | 0.0974 |
1040 | -0.0865 |
1041 | 0 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11102
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11102
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.311 |
10 | 10 | 0.184 |
100 | 100 | 0.689 |
101 | 101 | 0.906 |
102 | 102 | 0.444 |
103 | 103 | 0.1 |
104 | 104 | 0.807 |
105 | 105 | 0.587 |
106 | 106 | 0.0116 |
107 | 107 | 0.00778 |
108 | 108 | 0.616 |
109 | 109 | 0.0904 |
11 | 11 | 0.26 |
110 | 110 | 0.346 |
111 | 111 | 0.15 |
112 | 112 | 0.0167 |
113 | 113 | 0.35 |
114 | 114 | 0.163 |
115 | 115 | 0.769 |
116 | 116 | 0.27 |
117 | 117 | 0.678 |
118 | 118 | 0.4 |
119 | 119 | 0.248 |
12 | 12 | 0.854 |
120 | 120 | 0.792 |
121 | 121 | 0.883 |
122 | 122 | 0.772 |
123 | 123 | 0.167 |
124 | 124 | 0.858 |
125 | 125 | 0.947 |
126 | 126 | 0.0754 |
127 | 127 | 0.613 |
128 | 128 | 0.0442 |
129 | 129 | 0.485 |
13 | 13 | 0.00186 |
130 | 130 | 0.487 |
131 | 131 | 0.171 |
132 | 132 | 0.173 |
133 | 133 | 0.718 |
134 | 134 | 0.384 |
135 | 135 | 0.935 |
136 | 136 | 0.435 |
137 | 137 | 0.53 |
138 | 138 | 0.0137 |
139 | 139 | 0.0771 |
14 | 14 | 0.596 |
140 | 140 | 0.857 |
141 | 141 | 0.309 |
142 | 142 | 0.995 |
143 | 143 | 0.183 |
144 | 144 | 0.594 |
145 | 145 | 0.102 |
146 | 146 | 0.231 |
147 | 147 | 0.598 |
148 | 148 | 0.0481 |
149 | 149 | 0.283 |
15 | 15 | 0.173 |
150 | 150 | 0.24 |
151 | 151 | 0.544 |
152 | 152 | 0.0361 |
153 | 153 | 0.267 |
154 | 154 | 0.669 |
155 | 155 | 0.722 |
156 | 156 | 0.442 |
157 | 157 | 0.397 |
158 | 158 | 0.61 |
159 | 159 | 0.0978 |
160 | 160 | 0.0477 |
161 | 161 | 0.344 |
162 | 162 | 0.553 |
163 | 163 | 0.0455 |
164 | 164 | 0.102 |
165 | 165 | 0.428 |
166 | 166 | 0.685 |
167 | 167 | 0.821 |
168 | 168 | 0.313 |
169 | 169 | 0.013 |
17 | 17 | 0.0836 |
18 | 18 | 0.971 |
19 | 19 | 0.0563 |
2 | 2 | 0.0911 |
20 | 20 | 0.5 |
21 | 21 | 0.93 |
22 | 22 | 0.295 |
23 | 23 | 0.244 |
24 | 24 | 0.936 |
25 | 25 | 0.849 |
26 | 26 | 0.00495 |
27 | 27 | 0.539 |
28 | 28 | 0.813 |
29 | 29 | 0.609 |
3 | 3 | 0.286 |
30 | 30 | 0.359 |
31 | 31 | 0.51 |
32 | 32 | 0.0116 |
33 | 33 | 0.206 |
34 | 34 | 0.486 |
35 | 35 | 0.776 |
36 | 36 | 0.969 |
37 | 37 | 0.0586 |
38 | 38 | 0.462 |
39 | 39 | 0.0946 |
4 | 4 | 0.375 |
40 | 40 | 0.444 |
41 | 41 | 0.391 |
42 | 42 | 0.824 |
43 | 43 | 0.151 |
44 | 44 | 0.789 |
45 | 45 | 0.277 |
46 | 46 | 0.401 |
47 | 47 | 0.466 |
48 | 48 | 0.358 |
49 | 49 | 0.206 |
5 | 5 | 0.422 |
50 | 50 | 0.457 |
51 | 51 | 0.59 |
52 | 52 | 0.0266 |
53 | 53 | 0.721 |
54 | 54 | 0.656 |
55 | 55 | 0.276 |
56 | 56 | 0.38 |
57 | 57 | 0.687 |
58 | 58 | 0.525 |
59 | 59 | 0.148 |
6 | 6 | 0.724 |
60 | 60 | 0.0336 |
61 | 61 | 0.371 |
62 | 62 | 0.68 |
63 | 63 | 0.259 |
64 | 64 | 0.623 |
65 | 65 | 0.274 |
66 | 66 | 0.3 |
67 | 67 | 0.445 |
68 | 68 | 0.365 |
69 | 69 | 0.847 |
7 | 7 | 0.106 |
70 | 70 | 0.278 |
71 | 71 | 0.074 |
72 | 72 | 0.887 |
73 | 73 | 0.211 |
74 | 74 | 0.857 |
75 | 75 | 0.332 |
76 | 76 | 0.49 |
77 | 77 | 0.0638 |
78 | 78 | 0.106 |
79 | 79 | 0.645 |
8 | 8 | 0.321 |
80 | 80 | 0.552 |
81 | 81 | 0.566 |
82 | 82 | 0.173 |
83 | 83 | 0.921 |
84 | 84 | 0.994 |
85 | 85 | 0.0791 |
86 | 86 | 0.358 |
87 | 87 | 0.981 |
88 | 88 | 0.944 |
89 | 89 | 0.27 |
9 | 9 | 0.546 |
90 | 90 | 0.355 |
91 | 91 | 0.397 |
92 | 92 | 0.172 |
93 | 93 | 0.941 |
94 | 94 | 0.245 |
95 | 95 | 0.461 |
96 | 96 | 0.879 |
97 | 97 | 0.401 |
98 | 98 | 0.939 |
99 | 99 | 0.032 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11102
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000160 (intestine)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0005409 (gastrointestinal system)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000312 (mouse neonate N6 sample)
0011404 (mouse intestine- neonate N06 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)