FFCP PHASE1:Mm9::chr1:191746131..191746206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226830 | |EntrezGene=226830 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8R5A0 | |UniProt=Q8R5A0 | ||
|association_with_transcript=0bp_to_ENSMUST00000144452,NM_026796,uc007eax.1,uc011wym.1_5end | |association_with_transcript=0bp_to_ENSMUST00000144452,NM_026796,uc007eax.1,uc011wym.1_5end | ||
|cluster_id=chr1:191746131..191746206,- | |||
|description=CAGE_peak_1_at_Smyd2_5end | |description=CAGE_peak_1_at_Smyd2_5end | ||
|id=chr1:191746131..191746206,- | |id=chr1:191746131..191746206,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.65e-10!18;UBERON:0000948!3.65e-10!18;UBERON:0005498!3.65e-10!18;UBERON:0004140!3.65e-10!18;UBERON:0009881!3.65e-10!18;UBERON:0004141!3.65e-10!18;UBERON:0003084!3.65e-10!18;UBERON:0007005!3.65e-10!18;UBERON:0004139!3.65e-10!18;UBERON:0004291!3.65e-10!18;UBERON:0004535!1.50e-09!23;UBERON:0001009!1.50e-09!23;UBERON:0000073!1.82e-09!75;UBERON:0001016!1.82e-09!75;UBERON:0001017!5.71e-09!73;UBERON:0005743!5.71e-09!73;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10 | |ontology_enrichment_uberon=UBERON:0007100!3.65e-10!18;UBERON:0000948!3.65e-10!18;UBERON:0005498!3.65e-10!18;UBERON:0004140!3.65e-10!18;UBERON:0009881!3.65e-10!18;UBERON:0004141!3.65e-10!18;UBERON:0003084!3.65e-10!18;UBERON:0007005!3.65e-10!18;UBERON:0004139!3.65e-10!18;UBERON:0004291!3.65e-10!18;UBERON:0004535!1.50e-09!23;UBERON:0001009!1.50e-09!23;UBERON:0000073!1.82e-09!75;UBERON:0001016!1.82e-09!75;UBERON:0001017!5.71e-09!73;UBERON:0005743!5.71e-09!73;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.82e-12,92;UBERON:0007100,3.65e-10,18;UBERON:0000948,3.65e-10,18;UBERON:0005498,3.65e-10,18;UBERON:0004140,3.65e-10,18;UBERON:0009881,3.65e-10,18;UBERON:0004141,3.65e-10,18;UBERON:0003084,3.65e-10,18;UBERON:0007005,3.65e-10,18;UBERON:0004139,3.65e-10,18;UBERON:0004291,3.65e-10,18;UBERON:0004535,1.50e-09,23;UBERON:0001009,1.50e-09,23;UBERON:0001016,1.82e-09,75;UBERON:0001017,5.71e-09,73;UBERON:0002021,4.60e-07,10;UBERON:0000411,4.60e-07,10;UBERON:0001950,4.60e-07,10;UBERON:0000073,4.81e-07,54 | |||
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| ||
|short_description=p1@Smyd2 | |short_description=p1@Smyd2 | ||
}} | }} |
Latest revision as of 23:45, 26 September 2015
Short description: | p1@Smyd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Smyd2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000144452, NM_026796, uc007eax.1, uc011wym.1_5end |
EntrezGene: | Smyd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.82e-12 | 92 |
primary circulatory organ | 3.65e-10 | 18 |
heart | 3.65e-10 | 18 |
primitive heart tube | 3.65e-10 | 18 |
primary heart field | 3.65e-10 | 18 |
anterior lateral plate mesoderm | 3.65e-10 | 18 |
heart tube | 3.65e-10 | 18 |
heart primordium | 3.65e-10 | 18 |
cardiac mesoderm | 3.65e-10 | 18 |
cardiogenic plate | 3.65e-10 | 18 |
heart rudiment | 3.65e-10 | 18 |
cardiovascular system | 1.50e-09 | 23 |
circulatory system | 1.50e-09 | 23 |
nervous system | 1.82e-09 | 75 |
central nervous system | 5.71e-09 | 73 |
occipital lobe | 4.60e-07 | 10 |
visual cortex | 4.60e-07 | 10 |
neocortex | 4.60e-07 | 10 |
regional part of nervous system | 4.81e-07 | 54 |