FFCP PHASE1:Mm9::chr1:45499562..45499597,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=326 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:45499562..45499597,- | |||
|description=CAGE_peak_at_chr1:45499562..45499597,- | |description=CAGE_peak_at_chr1:45499562..45499597,- | ||
|id=chr1:45499562..45499597,- | |id=chr1:45499562..45499597,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.22e-20,3;CL:0000737,1.22e-20,3;CL:0000746,1.22e-20,3;CL:0000513,1.22e-20,3;CL:0000680,1.05e-17,6;CL:0000187,1.05e-17,6;CL:0000056,1.05e-17,6;CL:0000222,3.23e-15,7;CL:0002453,9.96e-13,8;CL:0000355,6.79e-12,9;CL:0000333,3.10e-10,10;CL:0000095,3.10e-10,10;CL:0000243,3.10e-10,10;CL:0000123,3.10e-10,10;CL:0000125,3.10e-10,10;CL:0000030,3.10e-10,10;CL:0000339,3.10e-10,10;CL:0000128,7.26e-10,6;CL:0000126,7.26e-10,6;CL:0000127,7.26e-10,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.79e-12,9;UBERON:0002036,6.79e-12,9;UBERON:0002385,6.79e-12,9;UBERON:0000486,6.79e-12,9;UBERON:0007503,6.79e-12,9;UBERON:0001015,6.79e-12,9;UBERON:0002329,6.79e-12,9;UBERON:0003082,6.79e-12,9;UBERON:0003059,6.79e-12,9;UBERON:0007282,6.79e-12,9;UBERON:0004290,6.79e-12,9;UBERON:0009618,6.79e-12,9;UBERON:0000383,9.97e-11,10;UBERON:0007524,9.01e-10,11;UBERON:0003077,9.01e-10,11;UBERON:0007285,9.01e-10,11;UBERON:0002204,2.16e-09,32 | |||
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| |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.506884656097573,0.550640256485045,0,1.96222640742402,0.219686182734472,1.1665793944457,1.1198913730029,0,0,0,0,11.3194151855817,10.0286703978565,8.25075347643908,0,0,0.633831403506179,0.338844532069132,0.889294796111139,1.7997994345628,0,0.7104801149461,1.79760066311043,0,0.103689612308478,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.454357159999104,0.529000920747499,0,0,0,0,0,0,0,0.511290967734173,0.519572009205738,1.41335829804136,0.14084341977668,1.28326477414318,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0,0.144599356919912,0,0.323533699894818,0.220841518460394,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.373220911830279,0,0,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0.657587197282725,0,1.74126083261083,0.61734640922383,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.23674473558521,0.393528463494808,0,0.232533944750408,0.536546802799238,0.233530684734339,0.493679549740441,0.32833492815819,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0.696710015581316,0,0.403367049246685,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.350679099451593,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0.390438744296638,0,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,0,0,0.534196811001766,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.322928853391811,0.482503399425247,0.358117032009409,0,0,0,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0.352071715937262,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0,0,0.367687016900028,0.222246727801615,0.618105171716683,0,0.505394423527595,0.50695859978048,0.754505365544305,0.0936415074698824,0.384150914429216,0.114870937911227,0.952587382566147,0.115884325944855,0.578727661391115,0.824171801606613,0.441596760403192,0,0.70990322463735,0,0.290692833264657,0.564656282491984,0.169229215783353,0.548783918618318,0.526139422875686,0.814824683075171,1.12228454331548,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.695603506861264 | ||
|short_description=p@chr1:45499562..45499597,- | |short_description=p@chr1:45499562..45499597,- | ||
}} | }} |
Latest revision as of 17:03, 5 August 2015
Short description: | p@chr1:45499562..45499597, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:45499562..45499597, - |
Coexpression cluster: | MCL_coexpression_mm9:326 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.22e-20 | 3 |
striated muscle cell | 1.22e-20 | 3 |
cardiac muscle cell | 1.22e-20 | 3 |
cardiac muscle myoblast | 1.22e-20 | 3 |
muscle precursor cell | 1.05e-17 | 6 |
muscle cell | 1.05e-17 | 6 |
myoblast | 1.05e-17 | 6 |
mesodermal cell | 3.23e-15 | 7 |
oligodendrocyte precursor cell | 9.96e-13 | 8 |
multi-potent skeletal muscle stem cell | 6.79e-12 | 9 |
migratory neural crest cell | 3.10e-10 | 10 |
neuron associated cell | 3.10e-10 | 10 |
glial cell (sensu Vertebrata) | 3.10e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 3.10e-10 | 10 |
glial cell | 3.10e-10 | 10 |
glioblast | 3.10e-10 | 10 |
glioblast (sensu Vertebrata) | 3.10e-10 | 10 |
oligodendrocyte | 7.26e-10 | 6 |
macroglial cell | 7.26e-10 | 6 |
astrocyte | 7.26e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 6.79e-12 | 9 |
striated muscle tissue | 6.79e-12 | 9 |
muscle tissue | 6.79e-12 | 9 |
multilaminar epithelium | 6.79e-12 | 9 |
epithelial vesicle | 6.79e-12 | 9 |
musculature | 6.79e-12 | 9 |
somite | 6.79e-12 | 9 |
myotome | 6.79e-12 | 9 |
presomitic mesoderm | 6.79e-12 | 9 |
presumptive segmental plate | 6.79e-12 | 9 |
dermomyotome | 6.79e-12 | 9 |
trunk paraxial mesoderm | 6.79e-12 | 9 |
musculature of body | 9.97e-11 | 10 |
dense mesenchyme tissue | 9.01e-10 | 11 |
paraxial mesoderm | 9.01e-10 | 11 |
presumptive paraxial mesoderm | 9.01e-10 | 11 |
musculoskeletal system | 2.16e-09 | 32 |