FFCP PHASE1:Mm9::chr4:135412002..135412039,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14105 | |EntrezGene=14105 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=327 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UYX6,Q9R0U0,Q3UA07 | |UniProt=Q3UYX6,Q9R0U0,Q3UA07 | ||
|association_with_transcript=0bp_to_ENSMUST00000154447,ENSMUST00000171299,NM_001080387,NM_010178,uc008vha.1,uc008vhb.1,uc008vhc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000154447,ENSMUST00000171299,NM_001080387,NM_010178,uc008vha.1,uc008vhb.1,uc008vhc.1_5end | ||
|cluster_id=chr4:135412002..135412039,+ | |||
|description=CAGE_peak_2_at_Srsf10_5end | |description=CAGE_peak_2_at_Srsf10_5end | ||
|id=chr4:135412002..135412039,+ | |id=chr4:135412002..135412039,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.43e-09!32;CL:0002032!3.43e-09!32;CL:0000037!3.43e-09!32;CL:0000566!3.43e-09!32;CL:0000837!3.43e-09!32;CL:0000542!2.46e-07!13;CL:0000051!2.46e-07!13;CL:0002031!4.17e-07!25;CL:0000838!5.57e-07!12 | |ontology_enrichment_celltype=CL:0000988!3.43e-09!32;CL:0002032!3.43e-09!32;CL:0000037!3.43e-09!32;CL:0000566!3.43e-09!32;CL:0000837!3.43e-09!32;CL:0000542!2.46e-07!13;CL:0000051!2.46e-07!13;CL:0002031!4.17e-07!25;CL:0000838!5.57e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.43e-09,32;CL:0002032,3.43e-09,32;CL:0000037,3.43e-09,32;CL:0000837,3.43e-09,32;CL:0000542,2.46e-07,13;CL:0000051,2.46e-07,13;CL:0002031,4.17e-07,25;CL:0000838,5.57e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!1.05e-09!147;UBERON:0004177!3.94e-09!29;UBERON:0002193!4.80e-08!48;UBERON:0000072!8.41e-08!27;UBERON:0002390!9.02e-08!45;UBERON:0003061!9.02e-08!45;UBERON:0002370!1.32e-07!23;UBERON:0000974!1.32e-07!23;UBERON:0004807!1.32e-07!23;UBERON:0005058!1.32e-07!23;UBERON:0003351!1.32e-07!23;UBERON:0009113!1.32e-07!23;UBERON:0003295!1.32e-07!23;UBERON:0009722!1.32e-07!23;UBERON:0005562!1.32e-07!23;UBERON:0007690!1.32e-07!23;UBERON:0000065!2.00e-07!41;UBERON:0000926!3.96e-07!193;UBERON:0004120!3.96e-07!193;UBERON:0006603!3.96e-07!193;UBERON:0001004!4.82e-07!42;UBERON:0003408!4.88e-07!24 | |ontology_enrichment_uberon=UBERON:0001048!1.05e-09!147;UBERON:0004177!3.94e-09!29;UBERON:0002193!4.80e-08!48;UBERON:0000072!8.41e-08!27;UBERON:0002390!9.02e-08!45;UBERON:0003061!9.02e-08!45;UBERON:0002370!1.32e-07!23;UBERON:0000974!1.32e-07!23;UBERON:0004807!1.32e-07!23;UBERON:0005058!1.32e-07!23;UBERON:0003351!1.32e-07!23;UBERON:0009113!1.32e-07!23;UBERON:0003295!1.32e-07!23;UBERON:0009722!1.32e-07!23;UBERON:0005562!1.32e-07!23;UBERON:0007690!1.32e-07!23;UBERON:0000065!2.00e-07!41;UBERON:0000926!3.96e-07!193;UBERON:0004120!3.96e-07!193;UBERON:0006603!3.96e-07!193;UBERON:0001004!4.82e-07!42;UBERON:0003408!4.88e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.45e-09,134;UBERON:0004177,3.94e-09,29;UBERON:0005057,3.94e-09,29;UBERON:0002193,4.80e-08,48;UBERON:0002405,4.80e-08,48;UBERON:0000072,8.41e-08,27;UBERON:0002390,9.02e-08,45;UBERON:0003061,9.02e-08,45;UBERON:0000077,9.33e-08,35;UBERON:0007811,1.01e-07,36;UBERON:0002370,1.32e-07,23;UBERON:0000974,1.32e-07,23;UBERON:0004807,1.32e-07,23;UBERON:0005058,1.32e-07,23;UBERON:0003351,1.32e-07,23;UBERON:0009113,1.32e-07,23;UBERON:0003295,1.32e-07,23;UBERON:0009722,1.32e-07,23;UBERON:0005562,1.32e-07,23;UBERON:0007690,1.32e-07,23;UBERON:0000065,2.00e-07,41;UBERON:0000926,2.79e-07,120;UBERON:0004120,2.79e-07,120;UBERON:0006603,2.79e-07,120;UBERON:0000153,4.13e-07,43;UBERON:0001004,4.82e-07,42;UBERON:0003408,4.88e-07,24 | |||
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| ||
|short_description=p2@Srsf10 | |short_description=p2@Srsf10 | ||
}} | }} |
Latest revision as of 12:43, 26 September 2015
Short description: | p2@Srsf10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Srsf10_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 0bp_to_ENSMUST00000154447, ENSMUST00000171299, NM_001080387, NM_010178, uc008vha.1, uc008vhb.1, uc008vhc.1_5end |
EntrezGene: | Srsf10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.43e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.43e-09 | 32 |
hematopoietic stem cell | 3.43e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.43e-09 | 32 |
lymphocyte | 2.46e-07 | 13 |
common lymphoid progenitor | 2.46e-07 | 13 |
hematopoietic lineage restricted progenitor cell | 4.17e-07 | 25 |
lymphoid lineage restricted progenitor cell | 5.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
primordium | 1.45e-09 | 134 |
hemopoietic organ | 3.94e-09 | 29 |
immune organ | 3.94e-09 | 29 |
hemolymphoid system | 4.80e-08 | 48 |
immune system | 4.80e-08 | 48 |
segment of respiratory tract | 8.41e-08 | 27 |
hematopoietic system | 9.02e-08 | 45 |
blood island | 9.02e-08 | 45 |
mixed endoderm/mesoderm-derived structure | 9.33e-08 | 35 |
craniocervical region | 1.01e-07 | 36 |
thymus | 1.32e-07 | 23 |
neck | 1.32e-07 | 23 |
respiratory system epithelium | 1.32e-07 | 23 |
hemolymphoid system gland | 1.32e-07 | 23 |
pharyngeal epithelium | 1.32e-07 | 23 |
thymic region | 1.32e-07 | 23 |
pharyngeal gland | 1.32e-07 | 23 |
entire pharyngeal arch endoderm | 1.32e-07 | 23 |
thymus primordium | 1.32e-07 | 23 |
early pharyngeal endoderm | 1.32e-07 | 23 |
respiratory tract | 2.00e-07 | 41 |
mesoderm | 2.79e-07 | 120 |
mesoderm-derived structure | 2.79e-07 | 120 |
presumptive mesoderm | 2.79e-07 | 120 |
anterior region of body | 4.13e-07 | 43 |
respiratory system | 4.82e-07 | 42 |
gland of gut | 4.88e-07 | 24 |