FFCP PHASE1:Hg19::chr10:101379080..101379085,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:101379080..101379085,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr10:101379080..101379085,+ | |description=CAGE_peak_at_chr10:101379080..101379085,+ | ||
|id=chr10:101379080..101379085,+ | |id=chr10:101379080..101379085,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.80e-56!140;CL:0002057!3.96e-50!42;CL:0000860!3.00e-46!45;CL:0000037!2.40e-45!172;CL:0000566!2.40e-45!172;CL:0002087!1.68e-43!119;CL:0000988!4.09e-42!182;CL:0000766!3.40e-40!76;CL:0002032!1.83e-38!165;CL:0000837!1.83e-38!165;CL:0002031!2.82e-37!124;CL:0002009!6.73e-34!65;CL:0002194!1.19e-32!63;CL:0000576!1.19e-32!63;CL:0000040!1.19e-32!63;CL:0000559!1.19e-32!63;CL:0000557!2.27e-30!71;CL:0000763!2.43e-29!112;CL:0000049!2.43e-29!112;CL:0000839!1.26e-28!70;CL:0002393!6.75e-27!9;CL:0002397!6.75e-27!9;CL:0000236!2.15e-15!14;CL:0000134!9.85e-15!358;CL:0002320!3.44e-14!365;CL:0000094!3.73e-14!8;CL:0000219!2.78e-12!390;CL:0000875!9.87e-11!3;CL:0002396!9.87e-11!3;CL:0000945!4.11e-10!24;CL:0000826!4.11e-10!24;CL:0000081!4.57e-10!11;CL:0000048!5.21e-10!430;CL:0000723!1.09e-09!436;CL:0000842!2.22e-09!3;CL:0000034!2.84e-09!444;CL:0000838!9.89e-09!52;CL:0000542!1.67e-08!53;CL:0000051!1.67e-08!53;CL:0000771!1.01e-07!2;CL:0000224!3.96e-07!4 | |ontology_enrichment_celltype=CL:0000738!1.80e-56!140;CL:0002057!3.96e-50!42;CL:0000860!3.00e-46!45;CL:0000037!2.40e-45!172;CL:0000566!2.40e-45!172;CL:0002087!1.68e-43!119;CL:0000988!4.09e-42!182;CL:0000766!3.40e-40!76;CL:0002032!1.83e-38!165;CL:0000837!1.83e-38!165;CL:0002031!2.82e-37!124;CL:0002009!6.73e-34!65;CL:0002194!1.19e-32!63;CL:0000576!1.19e-32!63;CL:0000040!1.19e-32!63;CL:0000559!1.19e-32!63;CL:0000557!2.27e-30!71;CL:0000763!2.43e-29!112;CL:0000049!2.43e-29!112;CL:0000839!1.26e-28!70;CL:0002393!6.75e-27!9;CL:0002397!6.75e-27!9;CL:0000236!2.15e-15!14;CL:0000134!9.85e-15!358;CL:0002320!3.44e-14!365;CL:0000094!3.73e-14!8;CL:0000219!2.78e-12!390;CL:0000875!9.87e-11!3;CL:0002396!9.87e-11!3;CL:0000945!4.11e-10!24;CL:0000826!4.11e-10!24;CL:0000081!4.57e-10!11;CL:0000048!5.21e-10!430;CL:0000723!1.09e-09!436;CL:0000842!2.22e-09!3;CL:0000034!2.84e-09!444;CL:0000838!9.89e-09!52;CL:0000542!1.67e-08!53;CL:0000051!1.67e-08!53;CL:0000771!1.01e-07!2;CL:0000224!3.96e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.22e-27;8!CL:0000875;1.59e-27;3!CL:0002396;1.59e-27;3!CL:0000576;9.51e-24;48!CL:0002393;3.04e-23;6!CL:0002397;3.04e-23;6!CL:0000766;2.19e-22;69!CL:0000081;4.33e-20;11!CL:0000771;5.86e-19;2!CL:0000860;5.06e-14;33!CL:0002057;5.06e-14;33!CL:0000775;5.84e-13;3!CL:0000473;4.39e-10;39!CL:0000234;4.39e-10;39!CL:0000763;5.80e-10;100!CL:0000738;1.19e-07;136!CL:0002087;4.70e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.48e-46,9;CL:0002397,1.48e-46,9;CL:0000766,1.93e-44,72;CL:0000860,1.03e-43,42;CL:0002057,1.03e-43,42;CL:0000473,6.03e-38,48;CL:0000234,6.03e-38,48;CL:0002194,7.23e-30,59;CL:0000576,7.23e-30,59;CL:0000040,7.23e-30,59;CL:0000559,7.23e-30,59;CL:0002009,7.99e-29,61;CL:0000763,9.27e-29,108;CL:0000049,9.27e-29,108;CL:0000875,1.60e-27,3;CL:0002396,1.60e-27,3;CL:0000094,1.66e-27,8;CL:0000738,1.92e-27,136;CL:0000839,1.73e-26,66;CL:0000557,4.62e-26,67;CL:0000037,1.24e-21,168;CL:0002032,1.86e-20,161;CL:0000837,1.86e-20,161;CL:0000988,2.25e-20,177;CL:0000081,5.39e-20,11;CL:0000771,5.37e-19,2;CL:0002087,1.10e-18,115;CL:0002031,1.37e-15,120;CL:0000775,6.58e-13,3;CL:0000134,1.67e-08,354;CL:0002320,2.85e-08,361;CL:0000219,1.91e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.82e-26;42!CL:0000049;1.44e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-32!102;UBERON:0003061!1.02e-32!102;UBERON:0002193!6.49e-29!112;UBERON:0002371!5.01e-28!80;UBERON:0001474!1.67e-25!86;UBERON:0004765!1.65e-20!101;UBERON:0001434!1.65e-20!101;UBERON:0002405!4.95e-17!115;UBERON:0002384!1.89e-13!375;UBERON:0003081!5.87e-12!216;UBERON:0002204!2.51e-09!167;UBERON:0000178!1.02e-08!15;UBERON:0000179!1.02e-08!15;UBERON:0000463!1.02e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!1.02e-32!102;UBERON:0003061!1.02e-32!102;UBERON:0002193!6.49e-29!112;UBERON:0002371!5.01e-28!80;UBERON:0001474!1.67e-25!86;UBERON:0004765!1.65e-20!101;UBERON:0001434!1.65e-20!101;UBERON:0002405!4.95e-17!115;UBERON:0002384!1.89e-13!375;UBERON:0003081!5.87e-12!216;UBERON:0002204!2.51e-09!167;UBERON:0000178!1.02e-08!15;UBERON:0000179!1.02e-08!15;UBERON:0000463!1.02e-08!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-22,76;UBERON:0002390,2.12e-22,98;UBERON:0003061,2.12e-22,98;UBERON:0001474,6.73e-21,82;UBERON:0002193,4.37e-20,108;UBERON:0004765,7.72e-19,90;UBERON:0002405,3.72e-18,93;UBERON:0001434,1.01e-16,100;UBERON:0003081,2.22e-09,203;UBERON:0002204,5.06e-09,167;UBERON:0002384,5.95e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0,0,0,0,0.154934401160603,0,0.293600439334847,1.10799081706375,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0.863077176966451,0.768482119587302,1.18241114944293,0,0,0,0.188242339542605,0.272906150057846,0,1.22433556948361,0.962787081228281,0,0,0.598390972864896,0.852449501065388,1.45104619314292,0,0,1.25624332628372,0.521482918420201,0.868755378820466,0.605399502633369,0,1.89877432464531,1.26753171787165,2.97646019951061,1.04829322754188,3.03287304095537,1.95229960693958,1.92870704036496,5.70025487482497,2.78483348078726,2.37463399894024,0,0.546138611262131,1.77901850772711,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,2.24702107184155,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,1.94541993357815,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0,0,0,0,0.154934401160603,0,0.293600439334847,1.10799081706375,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0.863077176966451,0.768482119587302,1.18241114944293,0,0,0,0.188242339542605,0.272906150057846,0,1.22433556948361,0.962787081228281,0,0,0.598390972864896,0.852449501065388,1.45104619314292,0,0,1.25624332628372,0.521482918420201,0.868755378820466,0.605399502633369,0,1.89877432464531,1.26753171787165,2.97646019951061,1.04829322754188,3.03287304095537,1.95229960693958,1.92870704036496,5.70025487482497,2.78483348078726,2.37463399894024,0,0.546138611262131,1.77901850772711,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,2.24702107184155,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,1.94541993357815,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:101379080..101379085,+ | |short_description=p@chr10:101379080..101379085,+ | ||
}} | }} |
Latest revision as of 09:24, 23 July 2015
Short description: | p@chr10:101379080..101379085, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:101379080..101379085, + |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.01e-22 | 76 |
hematopoietic system | 2.12e-22 | 98 |
blood island | 2.12e-22 | 98 |
bone element | 6.73e-21 | 82 |
hemolymphoid system | 4.37e-20 | 108 |
skeletal element | 7.72e-19 | 90 |
immune system | 3.72e-18 | 93 |
skeletal system | 1.01e-16 | 100 |
lateral plate mesoderm | 2.22e-09 | 203 |
musculoskeletal system | 5.06e-09 | 167 |
connective tissue | 5.95e-08 | 371 |