FFCP PHASE1:Mm9::chr4:88563185..88563192,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:88563185..88563192,- | |||
|description=CAGE_peak_at_chr4:88563185..88563192,- | |description=CAGE_peak_at_chr4:88563185..88563192,- | ||
|id=chr4:88563185..88563192,- | |id=chr4:88563185..88563192,- | ||
|ontology_enrichment_celltype=CL:0000068!3.51e-07!3;CL:0002202!3.51e-07!3;CL:0000069!3.51e-07!3;CL:0002632!3.51e-07!3;CL:0002368!3.51e-07!3;CL:0000307!3.51e-07!3;CL:0000377!3.51e-07!3 | |ontology_enrichment_celltype=CL:0000068!3.51e-07!3;CL:0002202!3.51e-07!3;CL:0000069!3.51e-07!3;CL:0002632!3.51e-07!3;CL:0002368!3.51e-07!3;CL:0000307!3.51e-07!3;CL:0000377!3.51e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.58e-86,3;CL:0002202,1.58e-86,3;CL:0000069,1.58e-86,3;CL:0002632,1.58e-86,3;CL:0002368,1.58e-86,3;CL:0000307,1.58e-86,3;CL:0000377,1.58e-86,3;CL:0002076,2.29e-18,15;CL:0000223,4.59e-14,20;CL:0000066,1.80e-11,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!3.51e-07!3;UBERON:0001005!3.51e-07!3;UBERON:0007196!3.51e-07!3;UBERON:0001558!3.51e-07!3 | |ontology_enrichment_uberon=UBERON:0003126!3.51e-07!3;UBERON:0001005!3.51e-07!3;UBERON:0007196!3.51e-07!3;UBERON:0001558!3.51e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.58e-86,3;UBERON:0001005,1.58e-86,3;UBERON:0007196,1.58e-86,3;UBERON:0001558,1.58e-86,3;UBERON:0005178,2.41e-16,17;UBERON:0005181,2.41e-16,17;UBERON:0002224,2.41e-16,17;UBERON:0000915,2.41e-16,17;UBERON:0008947,2.41e-16,17;UBERON:0003258,2.41e-16,17;UBERON:0000072,1.06e-10,27;UBERON:0000065,2.16e-07,41;UBERON:0001004,3.07e-07,42;UBERON:0003103,4.30e-07,43 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0.319088635981346,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,4.5463118612355,2.78695852022608,3.53867111510348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.190225626112559,0.949058123089023,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0.319088635981346,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,4.5463118612355,2.78695852022608,3.53867111510348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.190225626112559,0.949058123089023,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr4:88563185..88563192,- | |short_description=p@chr4:88563185..88563192,- | ||
}} | }} |
Latest revision as of 19:32, 5 August 2015
Short description: | p@chr4:88563185..88563192, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:88563185..88563192, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.58e-86 | 3 |
epithelial cell of tracheobronchial tree | 1.58e-86 | 3 |
branched duct epithelial cell | 1.58e-86 | 3 |
epithelial cell of lower respiratory tract | 1.58e-86 | 3 |
respiratory epithelial cell | 1.58e-86 | 3 |
tracheal epithelial cell | 1.58e-86 | 3 |
tracheoblast | 1.58e-86 | 3 |
endo-epithelial cell | 2.29e-18 | 15 |
endodermal cell | 4.59e-14 | 20 |
epithelial cell | 1.80e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.58e-86 | 3 |
respiratory airway | 1.58e-86 | 3 |
tracheobronchial tree | 1.58e-86 | 3 |
lower respiratory tract | 1.58e-86 | 3 |
thoracic cavity element | 2.41e-16 | 17 |
thoracic segment organ | 2.41e-16 | 17 |
thoracic cavity | 2.41e-16 | 17 |
thoracic segment of trunk | 2.41e-16 | 17 |
respiratory primordium | 2.41e-16 | 17 |
endoderm of foregut | 2.41e-16 | 17 |
segment of respiratory tract | 1.06e-10 | 27 |
respiratory tract | 2.16e-07 | 41 |
respiratory system | 3.07e-07 | 42 |
compound organ | 4.30e-07 | 43 |