FFCP PHASE1:Hg19::chr14:101014442..101014468,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57596 | |EntrezGene=57596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24163 | |HGNC=24163 | ||
|TSSclassifier=strong | |||
|UniProt=G3V600 | |UniProt=G3V600 | ||
|association_with_transcript=-7bp_to_ENST00000554356_5end | |association_with_transcript=-7bp_to_ENST00000554356_5end | ||
|cluster_id=chr14:101014442..101014468,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_2_at_BEGAIN_5end | |description=CAGE_peak_2_at_BEGAIN_5end | ||
|id=chr14:101014442..101014468,- | |id=chr14:101014442..101014468,- | ||
|ontology_enrichment_celltype=CL:0000037!3.81e-39!172;CL:0000566!3.81e-39!172;CL:0002032!2.09e-37!165;CL:0000837!2.09e-37!165;CL:0000988!3.53e-37!182;CL:0000763!4.56e-36!112;CL:0000049!4.56e-36!112;CL:0000738!7.78e-27!140;CL:0000766!2.89e-25!76;CL:0002031!2.34e-23!124;CL:0000839!6.08e-23!70;CL:0002087!1.42e-22!119;CL:0000860!4.42e-22!45;CL:0000557!2.46e-21!71;CL:0002194!8.73e-20!63;CL:0000576!8.73e-20!63;CL:0000040!8.73e-20!63;CL:0000559!8.73e-20!63;CL:0002057!2.00e-19!42;CL:0002009!9.75e-19!65;CL:0000134!6.77e-07!358;CL:0000236!7.10e-07!14 | |ontology_enrichment_celltype=CL:0000037!3.81e-39!172;CL:0000566!3.81e-39!172;CL:0002032!2.09e-37!165;CL:0000837!2.09e-37!165;CL:0000988!3.53e-37!182;CL:0000763!4.56e-36!112;CL:0000049!4.56e-36!112;CL:0000738!7.78e-27!140;CL:0000766!2.89e-25!76;CL:0002031!2.34e-23!124;CL:0000839!6.08e-23!70;CL:0002087!1.42e-22!119;CL:0000860!4.42e-22!45;CL:0000557!2.46e-21!71;CL:0002194!8.73e-20!63;CL:0000576!8.73e-20!63;CL:0000040!8.73e-20!63;CL:0000559!8.73e-20!63;CL:0002057!2.00e-19!42;CL:0002009!9.75e-19!65;CL:0000134!6.77e-07!358;CL:0000236!7.10e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.50e-13;5!CL:0000763;1.95e-11;100!CL:0000236;1.56e-09;13!CL:0000163;2.17e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.18e-23,108;CL:0000049,1.18e-23,108;CL:0000037,3.59e-23,168;CL:0002032,5.96e-23,161;CL:0000837,5.96e-23,161;CL:0000988,1.53e-21,177;CL:0000097,2.31e-13,5;CL:0002028,2.31e-13,5;CL:0000738,6.07e-11,136;CL:0000766,7.03e-11,72;CL:0000236,4.95e-09,14;CL:0002031,1.59e-08,120;CL:0000839,6.97e-08,66;CL:0000557,1.01e-07,67;CL:0000163,2.07e-07,9;CL:0000134,4.89e-07,354;CL:0002320,9.78e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;6.63e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.43e-16!31;DOID:1240!1.12e-13!39;DOID:2531!4.64e-11!51;DOID:0060083!4.64e-11!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.27e-26;31!DOID:1240;5.85e-16;39!DOID:2531;1.96e-10;51!DOID:0060083;1.96e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.69e-27,31;DOID:1240,4.83e-21,39;DOID:2531,2.88e-17,51;DOID:0060083,2.88e-17,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.17e-23!102;UBERON:0003061!3.17e-23!102;UBERON:0002193!3.16e-22!112;UBERON:0002371!4.29e-18!80;UBERON:0001474!9.49e-16!86;UBERON:0002405!2.29e-14!115;UBERON:0004765!3.07e-11!101;UBERON:0001434!3.07e-11!101;UBERON:0001737!1.09e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.91e-09;2!UBERON:0005058;5.91e-09;2!UBERON:0009113;5.91e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.39e-07,98;UBERON:0003061,5.39e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,3.14691421479123,1.15148819429164,0.154816123316076,0,0,0,0.232401601740905,0,0,0.553995408531877,0.601633342410425,0,0,0,0,0.145398238779565,1.51150377475524,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.47296445977717,1.37898272294647,0.645484683583826,1.35426486594342,0.188242339542605,0.545812300115692,0,0.918251677112708,0.320929027076094,1.27867425159808,0,0.398927315243264,0,0.290209238628584,0,0,1.50749199154046,0,1.3031330682307,0.605399502633369,0.736555271975129,0.632924774881769,1.05627643155971,0.637812899895131,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,2.18455444504853,1.77901850772711,1.70692089026603,0.400395987036012,0.574752439954483,0,0,1.70763890732835,1.17447437874188,1.91136614062614,0,0.560508562981536,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0.132957960518865,0.715471872916026,2.28797964312051,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.505754070234305,0.482022059766964,1.43382164552112,1.08939722046203,1.66089433377768,0.539325232640658,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,1.58040879591855,0,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,2.99364675644969,12.4396869324463,20.8973932454594,15.9065466117239,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.587403472388222,0,0.620304078368662,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.952927101831156,0.822724546172388,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0.766021480529467,0.635020748171649,1.94773164164733,1.96558024679421,0.456469358066384,1.09675927041116,0,1.69291777801603,0.1605880751037,1.21079824314629,7.23938604073555,21.2973313748574,3.99412993600995,3.13146551049382,3.8375302593739,2.73543333562856,0,1.23087398947712,1.89318974933188,0.33307196799782,0,8.98274593959455,0.293016358543788,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,2.04628948090749,0.394573622547734,0,0,0,0,0,0.260427761085233,0,0,0,0.762760950878299,0.945550727071745,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0,0.628303510868405,0,1.27600463892768,0,0,0,1.2558420511602,0.332423363800313,0,0,0,0,1.74830236878417,0,0,0,0,0,0.973033209536731,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0.967563312890852,1.16942907337897,1.06750094169172,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0.537862017998534,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.640724475406168,0.157204305099666,0,0.496166021811951,0,1.46151118057075,0,0.544017803369474,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,1.92045113449454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,1.56302802246618,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0.236387681767936,0.222462803784138,0.39246546425257,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,2.31522474323834,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,3.42321222130832,2.54506328613017,0,0.0636471582781649,0,0,0,0.471464371102113,0.286888821570705,0,0.0814032686109745,0,0,0,0,0.733448665097199,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,3.14691421479123,1.15148819429164,0.154816123316076,0,0,0,0.232401601740905,0,0,0.553995408531877,0.601633342410425,0,0,0,0,0.145398238779565,1.51150377475524,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.47296445977717,1.37898272294647,0.645484683583826,1.35426486594342,0.188242339542605,0.545812300115692,0,0.918251677112708,0.320929027076094,1.27867425159808,0,0.398927315243264,0,0.290209238628584,0,0,1.50749199154046,0,1.3031330682307,0.605399502633369,0.736555271975129,0.632924774881769,1.05627643155971,0.637812899895131,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,2.18455444504853,1.77901850772711,1.70692089026603,0.400395987036012,0.574752439954483,0,0,1.70763890732835,1.17447437874188,1.91136614062614,0,0.560508562981536,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0.132957960518865,0.715471872916026,2.28797964312051,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.505754070234305,0.482022059766964,1.43382164552112,1.08939722046203,1.66089433377768,0.539325232640658,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,1.58040879591855,0,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,2.99364675644969,12.4396869324463,20.8973932454594,15.9065466117239,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.587403472388222,0,0.620304078368662,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.952927101831156,0.822724546172388,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0.766021480529467,0.635020748171649,1.94773164164733,1.96558024679421,0.456469358066384,1.09675927041116,0,1.69291777801603,0.1605880751037,1.21079824314629,7.23938604073555,21.2973313748574,3.99412993600995,3.13146551049382,3.8375302593739,2.73543333562856,0,1.23087398947712,1.89318974933188,0.33307196799782,0,8.98274593959455,0.293016358543788,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,2.04628948090749,0.394573622547734,0,0,0,0,0,0.260427761085233,0,0,0,0.762760950878299,0.945550727071745,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0,0.628303510868405,0,1.27600463892768,0,0,0,1.2558420511602,0.332423363800313,0,0,0,0,1.74830236878417,0,0,0,0,0,0.973033209536731,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0.967563312890852,1.16942907337897,1.06750094169172,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0.537862017998534,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.640724475406168,0.157204305099666,0,0.496166021811951,0,1.46151118057075,0,0.544017803369474,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,1.92045113449454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,1.56302802246618,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0.236387681767936,0.222462803784138,0.39246546425257,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,2.31522474323834,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,3.42321222130832,2.54506328613017,0,0.0636471582781649,0,0,0,0.471464371102113,0.286888821570705,0,0.0814032686109745,0,0,0,0,0.733448665097199,0,0,0,0 | ||
|short_description=p2@BEGAIN | |short_description=p2@BEGAIN | ||
}} | }} |
Latest revision as of 10:38, 18 September 2015
Short description: | p2@BEGAIN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BEGAIN_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -7bp_to_ENST00000554356_5end |
EntrezGene: | BEGAIN |
HGNC: | 24163 |
UniProt: | G3V600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.18e-23 | 108 |
common myeloid progenitor | 1.18e-23 | 108 |
hematopoietic stem cell | 3.59e-23 | 168 |
hematopoietic oligopotent progenitor cell | 5.96e-23 | 161 |
hematopoietic multipotent progenitor cell | 5.96e-23 | 161 |
hematopoietic cell | 1.53e-21 | 177 |
mast cell | 2.31e-13 | 5 |
basophil mast progenitor cell | 2.31e-13 | 5 |
leukocyte | 6.07e-11 | 136 |
myeloid leukocyte | 7.03e-11 | 72 |
B cell | 4.95e-09 | 14 |
hematopoietic lineage restricted progenitor cell | 1.59e-08 | 120 |
myeloid lineage restricted progenitor cell | 6.97e-08 | 66 |
granulocyte monocyte progenitor cell | 1.01e-07 | 67 |
endocrine cell | 2.07e-07 | 9 |
mesenchymal cell | 4.89e-07 | 354 |
connective tissue cell | 9.78e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.39e-07 | 98 |
blood island | 5.39e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.69e-27 | 31 |
leukemia | 4.83e-21 | 39 |
hematologic cancer | 2.88e-17 | 51 |
immune system cancer | 2.88e-17 | 51 |