FFCP PHASE1:Hg19::chr10:5567551..5567579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5567551..5567579,+ | |||
|coexpression_cluster_id=C3027 | |||
|description=CAGE_peak_at_chr10:5567551..5567579,+ | |description=CAGE_peak_at_chr10:5567551..5567579,+ | ||
|id=chr10:5567551..5567579,+ | |id=chr10:5567551..5567579,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.90e-14!43;CL:0002159!1.00e-13!13;CL:0002621!3.31e-13!3;CL:0002328!3.92e-12!3;CL:0002368!7.33e-10!13;CL:0002327!9.48e-10!4;CL:0000223!1.11e-09!59;CL:0000575!8.85e-09!2;CL:0002202!6.11e-07!9;CL:0002632!6.11e-07!9 | |ontology_enrichment_celltype=CL:0002076!1.90e-14!43;CL:0002159!1.00e-13!13;CL:0002621!3.31e-13!3;CL:0002328!3.92e-12!3;CL:0002368!7.33e-10!13;CL:0002327!9.48e-10!4;CL:0000223!1.11e-09!59;CL:0000575!8.85e-09!2;CL:0002202!6.11e-07!9;CL:0002632!6.11e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.75e-24;3!CL:0000575;8.13e-16;2!CL:0002159;1.80e-13;14!CL:0002231;2.64e-11;3!CL:0002327;5.65e-09;4!CL:0002076;1.68e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.64e-24,3;CL:0000575,1.19e-15,2;CL:0002159,1.95e-13,14;CL:0002231,2.78e-11,3;CL:0002327,5.76e-09,4;CL:0002076,2.92e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.18e-09;1!UBERON:0008801;9.17e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.60e-09;1!DOID:3149;1.60e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.60e-09,1;DOID:3149,1.60e-09,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001949;2.75e-24;3!UBERON:0000165;1.36e-16;28!UBERON:0000161;4.17e-14;19!UBERON:0000166;4.17e-14;19!UBERON:0001723;1.65e-11;3!UBERON:0001033;1.65e-11;3!UBERON:0003929;9.82e-11;7!UBERON:0003729;7.66e-10;13!UBERON:0000344;1.53e-09;20!UBERON:0003350;1.88e-09;8!UBERON:0001828;1.88e-09;8!UBERON:0007811;2.17e-09;52!UBERON:0000153;2.30e-09;54!UBERON:0005795;5.53e-09;1!UBERON:0001911;5.65e-09;4!UBERON:0002372;9.17e-09;1!UBERON:0001831;9.17e-09;1!UBERON:0001961;9.17e-09;1!UBERON:0001744;9.17e-09;1!UBERON:0001042;9.17e-09;1!UBERON:0001567;9.17e-09;1!UBERON:0001735;9.17e-09;1!UBERON:0000964;2.30e-08;4!UBERON:0010409;2.30e-08;4!UBERON:0001444;2.36e-08;48!UBERON:0000033;3.78e-08;50!UBERON:0001555;2.09e-07;54 | |||
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| ||
|short_description=p@chr10:5567551..5567579,+ | |short_description=p@chr10:5567551..5567579,+ | ||
}} | }} |
Latest revision as of 14:13, 23 July 2015
Short description: | p@chr10:5567551..5567579, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5567551..5567579, + |
Coexpression cluster: | C3027_Mammary_keratoacanthoma_Gingival_Prostate_tongue_esophagus_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.64e-24 | 3 |
corneal epithelial cell | 1.19e-15 | 2 |
general ecto-epithelial cell | 1.95e-13 | 14 |
epithelial cell of prostate | 2.78e-11 | 3 |
mammary gland epithelial cell | 5.76e-09 | 4 |
endo-epithelial cell | 2.92e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.64e-24 | 3 |
oral opening | 2.01e-21 | 22 |
orifice | 7.93e-20 | 36 |
anterior region of body | 1.27e-18 | 62 |
craniocervical region | 1.27e-18 | 62 |
surface structure | 6.11e-17 | 99 |
mouth | 5.32e-16 | 29 |
stomodeum | 5.32e-16 | 29 |
head | 1.06e-14 | 56 |
subdivision of head | 5.49e-14 | 49 |
chordate pharynx | 1.29e-12 | 10 |
pharyngeal region of foregut | 1.29e-12 | 10 |
pharynx | 1.74e-11 | 11 |
tongue | 1.74e-11 | 3 |
gustatory system | 1.74e-11 | 3 |
future tongue | 1.74e-11 | 3 |
mouth mucosa | 7.31e-10 | 13 |
mucosa | 1.48e-09 | 20 |
epithelium of mucosa | 1.85e-09 | 8 |
gingiva | 1.85e-09 | 8 |
mammary gland | 5.76e-09 | 4 |
mammary bud | 5.76e-09 | 4 |
mammary ridge | 5.76e-09 | 4 |
mammary placode | 5.76e-09 | 4 |
respiratory system | 8.44e-09 | 74 |
parotid gland | 8.49e-09 | 1 |
cheek | 8.49e-09 | 1 |
parotid gland primordium | 8.49e-09 | 1 |
tonsil | 9.17e-09 | 1 |
mucosa-associated lymphoid tissue | 9.17e-09 | 1 |
lymphoid tissue | 9.17e-09 | 1 |
tonsillar ring | 9.17e-09 | 1 |
cornea | 2.78e-08 | 4 |
eye surface | 2.78e-08 | 4 |
optic eminence | 2.78e-08 | 4 |
corneal primordium | 2.78e-08 | 4 |
neck | 1.40e-07 | 10 |
epithelial fold | 3.34e-07 | 47 |
pharyngeal arch system | 3.45e-07 | 18 |
respiratory system epithelium | 8.45e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.60e-09 | 1 |
keratoacanthoma | 1.60e-09 | 1 |