FFCP PHASE1:Mm9::chr6:34718780..34718783,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:34718780..34718783,+ | |||
|description=CAGE_peak_at_chr6:34718780..34718783,+ | |description=CAGE_peak_at_chr6:34718780..34718783,+ | ||
|id=chr6:34718780..34718783,+ | |id=chr6:34718780..34718783,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.61e-08,6;CL:0000187,1.61e-08,6;CL:0000056,1.61e-08,6;CL:0000222,3.16e-07,7;CL:0002494,5.61e-07,3;CL:0000737,5.61e-07,3;CL:0000746,5.61e-07,3;CL:0000513,5.61e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.74e-09!33;UBERON:0003914!8.79e-09!47;UBERON:0004535!8.96e-09!23;UBERON:0001009!8.96e-09!23;UBERON:0007100!1.73e-07!18;UBERON:0000948!1.73e-07!18;UBERON:0005498!1.73e-07!18;UBERON:0004140!1.73e-07!18;UBERON:0009881!1.73e-07!18;UBERON:0004141!1.73e-07!18;UBERON:0003084!1.73e-07!18;UBERON:0007005!1.73e-07!18;UBERON:0004139!1.73e-07!18;UBERON:0004291!1.73e-07!18 | |ontology_enrichment_uberon=UBERON:0004872!2.74e-09!33;UBERON:0003914!8.79e-09!47;UBERON:0004535!8.96e-09!23;UBERON:0001009!8.96e-09!23;UBERON:0007100!1.73e-07!18;UBERON:0000948!1.73e-07!18;UBERON:0005498!1.73e-07!18;UBERON:0004140!1.73e-07!18;UBERON:0009881!1.73e-07!18;UBERON:0004141!1.73e-07!18;UBERON:0003084!1.73e-07!18;UBERON:0007005!1.73e-07!18;UBERON:0004139!1.73e-07!18;UBERON:0004291!1.73e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.85e-12,47;UBERON:0004535,2.92e-12,23;UBERON:0001009,2.92e-12,23;UBERON:0007100,1.08e-11,18;UBERON:0000948,1.08e-11,18;UBERON:0005498,1.08e-11,18;UBERON:0004140,1.08e-11,18;UBERON:0009881,1.08e-11,18;UBERON:0004141,1.08e-11,18;UBERON:0003084,1.08e-11,18;UBERON:0007005,1.08e-11,18;UBERON:0004139,1.08e-11,18;UBERON:0004291,1.08e-11,18;UBERON:0004872,7.09e-09,33;UBERON:0003103,7.55e-08,43 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,0.506884656097573,1.46837401729345,0,0,0,0,0.139986421625363,0,0,0,0,1.28629718017973,2.29226751951005,4.12537673821954,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0,0.302904773332736,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0,0.170430322578058,1.03914401841148,0.70667914902068,0.14084341977668,1.28326477414318,0,0,1.29894624606728,1.52015919285059,1.01104889002957,0.22836775943812,0,0,1.04091196059682,0.608930956624282,0.461230994512117,0.301445281105245,1.29347577849275,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.324482526135515,0.81471491080253,0.248813941220186,0,0.420883711772948,1.04096354370163,0.459804208866946,0.180062129805349,0.90422890701429,0.680364991513279,0.640568601424249,0.937017245597288,0.517406741478031,0,0.189106080167819,0.527853372491847,0,1.94633074457919,0,0.823128545631774,1.39323986772945,0,0,0,1.03562886267751,1.64168241986767,1.80062061461015,0.23674473558521,2.16440654922144,2.31400669331067,1.62773761325285,0.268273401399619,1.75148013550754,2.30383789878873,0.820837320395476,0.648550476366846,0.584799949701329,0.219550115291051,0.134206418760372,0,0.411618449517138,0,0.528901133327089,0.426576501070468,1.85789337488351,0.38660238396628,0.403367049246685,0,0,0,0.164698954724011,0.754005626400808,0.198956472041151,1.55971269695296,0,0.432276099749388,0.597423819763102,0,0.685491075658373,0,0.610953983535943,1.16371492300575,0.911765658574141,0.316182685621286,0.738050739898011,1.09899109488962,0.123397163921801,1.77871576252289,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,2.10775794807546,1.92192989231657,10.0637744569148,1.86070473834252,1.24815069245824,0.757736633841335,1.07638448113147,0.964887042726734,0,0.189491411770485,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0.714130922658041,0.195133647857799,1.57635144106191,2.21464689648775,0.797273843287435,0.491589944147214,0.690739927463582,0.433947175744535,0,0,0,0,0,0.234423373184406,0.163934945376675,0,0.631016438832513,0,0.215423397732799,0.477937595905104,0,0,1.21443210502468,0.584511715822624,0.790575555893047,0,0.141940085208269,0.35613120733451,0.325773918707152,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.8962205476149,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.886701168211368,0.891844088010353,1.48094118541909,0.304464949114599,0.938686832254841,0.63549621259146,0,0.49465875882444,0.968786560175433,0.482503399425247,0.477489376012546,0.984845398470368,0,0.18542530201051,0.170870880797853,0.619160603889667,1.29636169158798,0.753473828018764,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,1.40406943068342,1.04544148007234,1.09181281873089,1.07891477107857,1.1571483801547,0.785267825952089,0.259229946583586,0,0,0.598066184175915,0.827292452285488,0.777804753376191,0.904118764344118,1.520605129417,1.29092962510329,0.2604087696879,0.314578033277133,0,0.288030006257865,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0.201932899896295,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0.62799699626633,0.335769232728157,0.772758376128762,0.375364950902364,1.09890974560359,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.749132059759059,0.192075457214608,0.287177344778066,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.658765662907314,0.676916863133412,0.914639864363863,0.263069711437843,0.814824683075171,0.561142271657738,0.593175090620871,0.29551344712669,2.04615521584845,0.619747364743864,0,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.441182838239031,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,0.506884656097573,1.46837401729345,0,0,0,0,0.139986421625363,0,0,0,0,1.28629718017973,2.29226751951005,4.12537673821954,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0,0.302904773332736,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0,0.170430322578058,1.03914401841148,0.70667914902068,0.14084341977668,1.28326477414318,0,0,1.29894624606728,1.52015919285059,1.01104889002957,0.22836775943812,0,0,1.04091196059682,0.608930956624282,0.461230994512117,0.301445281105245,1.29347577849275,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.324482526135515,0.81471491080253,0.248813941220186,0,0.420883711772948,1.04096354370163,0.459804208866946,0.180062129805349,0.90422890701429,0.680364991513279,0.640568601424249,0.937017245597288,0.517406741478031,0,0.189106080167819,0.527853372491847,0,1.94633074457919,0,0.823128545631774,1.39323986772945,0,0,0,1.03562886267751,1.64168241986767,1.80062061461015,0.23674473558521,2.16440654922144,2.31400669331067,1.62773761325285,0.268273401399619,1.75148013550754,2.30383789878873,0.820837320395476,0.648550476366846,0.584799949701329,0.219550115291051,0.134206418760372,0,0.411618449517138,0,0.528901133327089,0.426576501070468,1.85789337488351,0.38660238396628,0.403367049246685,0,0,0,0.164698954724011,0.754005626400808,0.198956472041151,1.55971269695296,0,0.432276099749388,0.597423819763102,0,0.685491075658373,0,0.610953983535943,1.16371492300575,0.911765658574141,0.316182685621286,0.738050739898011,1.09899109488962,0.123397163921801,1.77871576252289,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,2.10775794807546,1.92192989231657,10.0637744569148,1.86070473834252,1.24815069245824,0.757736633841335,1.07638448113147,0.964887042726734,0,0.189491411770485,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0.714130922658041,0.195133647857799,1.57635144106191,2.21464689648775,0.797273843287435,0.491589944147214,0.690739927463582,0.433947175744535,0,0,0,0,0,0.234423373184406,0.163934945376675,0,0.631016438832513,0,0.215423397732799,0.477937595905104,0,0,1.21443210502468,0.584511715822624,0.790575555893047,0,0.141940085208269,0.35613120733451,0.325773918707152,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.8962205476149,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.886701168211368,0.891844088010353,1.48094118541909,0.304464949114599,0.938686832254841,0.63549621259146,0,0.49465875882444,0.968786560175433,0.482503399425247,0.477489376012546,0.984845398470368,0,0.18542530201051,0.170870880797853,0.619160603889667,1.29636169158798,0.753473828018764,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,1.40406943068342,1.04544148007234,1.09181281873089,1.07891477107857,1.1571483801547,0.785267825952089,0.259229946583586,0,0,0.598066184175915,0.827292452285488,0.777804753376191,0.904118764344118,1.520605129417,1.29092962510329,0.2604087696879,0.314578033277133,0,0.288030006257865,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0.201932899896295,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0.62799699626633,0.335769232728157,0.772758376128762,0.375364950902364,1.09890974560359,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.749132059759059,0.192075457214608,0.287177344778066,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.658765662907314,0.676916863133412,0.914639864363863,0.263069711437843,0.814824683075171,0.561142271657738,0.593175090620871,0.29551344712669,2.04615521584845,0.619747364743864,0,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.441182838239031,0 | ||
|short_description=p@chr6:34718780..34718783,+ | |short_description=p@chr6:34718780..34718783,+ | ||
}} | }} |
Latest revision as of 14:52, 5 August 2015
Short description: | p@chr6:34718780..34718783, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:34718780..34718783, + |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.61e-08 | 6 |
muscle cell | 1.61e-08 | 6 |
myoblast | 1.61e-08 | 6 |
mesodermal cell | 3.16e-07 | 7 |
cardiocyte | 5.61e-07 | 3 |
striated muscle cell | 5.61e-07 | 3 |
cardiac muscle cell | 5.61e-07 | 3 |
cardiac muscle myoblast | 5.61e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.85e-12 | 47 |
cardiovascular system | 2.92e-12 | 23 |
circulatory system | 2.92e-12 | 23 |
primary circulatory organ | 1.08e-11 | 18 |
heart | 1.08e-11 | 18 |
primitive heart tube | 1.08e-11 | 18 |
primary heart field | 1.08e-11 | 18 |
anterior lateral plate mesoderm | 1.08e-11 | 18 |
heart tube | 1.08e-11 | 18 |
heart primordium | 1.08e-11 | 18 |
cardiac mesoderm | 1.08e-11 | 18 |
cardiogenic plate | 1.08e-11 | 18 |
heart rudiment | 1.08e-11 | 18 |
splanchnic layer of lateral plate mesoderm | 7.09e-09 | 33 |
compound organ | 7.55e-08 | 43 |