FFCP PHASE1:Hg19::chr14:75745523..75745537,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2353 | |EntrezGene=2353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3796 | |HGNC=3796 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ65,G3V5N9,G3V289 | |UniProt=B4DQ65,G3V5N9,G3V289 | ||
|association_with_transcript=0bp_to_ENST00000535987,ENST00000554212,ENST00000554617,ENST00000556324_5end | |association_with_transcript=0bp_to_ENST00000535987,ENST00000554212,ENST00000554617,ENST00000556324_5end | ||
|cluster_id=chr14:75745523..75745537,+ | |||
|coexpression_cluster_id=C269 | |||
|description=CAGE_peak_1_at_FOS_5end | |description=CAGE_peak_1_at_FOS_5end | ||
|id=chr14:75745523..75745537,+ | |id=chr14:75745523..75745537,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.14e-20!42;CL:0000860!8.62e-18!45;CL:0000766!9.85e-18!76;CL:0000557!6.26e-15!71;CL:0000738!4.43e-14!140;CL:0002009!5.28e-14!65;CL:0000839!4.10e-13!70;CL:0002194!4.19e-13!63;CL:0000576!4.19e-13!63;CL:0000040!4.19e-13!63;CL:0000559!4.19e-13!63;CL:0002031!4.25e-10!124;CL:0002087!5.40e-10!119;CL:0000037!9.47e-09!172;CL:0000566!9.47e-09!172;CL:0000763!9.87e-09!112;CL:0000049!9.87e-09!112;CL:0002032!3.04e-07!165;CL:0000837!3.04e-07!165;CL:0000988!4.76e-07!182 | |ontology_enrichment_celltype=CL:0002057!9.14e-20!42;CL:0000860!8.62e-18!45;CL:0000766!9.85e-18!76;CL:0000557!6.26e-15!71;CL:0000738!4.43e-14!140;CL:0002009!5.28e-14!65;CL:0000839!4.10e-13!70;CL:0002194!4.19e-13!63;CL:0000576!4.19e-13!63;CL:0000040!4.19e-13!63;CL:0000559!4.19e-13!63;CL:0002031!4.25e-10!124;CL:0002087!5.40e-10!119;CL:0000037!9.47e-09!172;CL:0000566!9.47e-09!172;CL:0000763!9.87e-09!112;CL:0000049!9.87e-09!112;CL:0002032!3.04e-07!165;CL:0000837!3.04e-07!165;CL:0000988!4.76e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-13;33!CL:0002057;1.89e-13;33!CL:0000576;5.02e-11;48!CL:0000473;3.33e-10;39!CL:0000234;3.33e-10;39!CL:0000766;9.35e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.13e-20,42;CL:0002057,9.13e-20,42;CL:0000766,2.78e-19,72;CL:0000473,5.45e-18,48;CL:0000234,5.45e-18,48;CL:0000557,2.37e-16,67;CL:0002009,1.88e-15,61;CL:0000738,7.30e-15,136;CL:0002194,1.64e-14,59;CL:0000576,1.64e-14,59;CL:0000040,1.64e-14,59;CL:0000559,1.64e-14,59;CL:0000839,2.10e-14,66;CL:0002031,9.23e-11,120;CL:0002087,1.14e-10,115;CL:0000763,2.23e-09,108;CL:0000049,2.23e-09,108;CL:0000037,3.19e-09,168;CL:0000988,9.37e-08,177;CL:0002032,1.15e-07,161;CL:0000837,1.15e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.86e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.64e-16!102;UBERON:0003061!2.64e-16!102;UBERON:0002371!1.24e-13!80;UBERON:0001474!3.62e-13!86;UBERON:0002193!7.82e-13!112;UBERON:0004765!7.73e-10!101;UBERON:0001434!7.73e-10!101;UBERON:0002405!8.66e-09!115;UBERON:0007023!1.72e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.93e-17,98;UBERON:0003061,1.93e-17,98;UBERON:0002371,7.86e-15,76;UBERON:0001474,2.89e-14,82;UBERON:0004765,6.61e-14,90;UBERON:0002193,1.04e-13,108;UBERON:0001434,3.43e-11,100;UBERON:0002405,1.33e-10,93;UBERON:0007023,1.53e-08,114 | |||
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29.4923012918974 | ||
|short_description=p1@FOS | |short_description=p1@FOS | ||
}} | }} |
Latest revision as of 02:50, 16 September 2015
Short description: | p1@FOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOS_5end |
Coexpression cluster: | C269_Basophils_Mast_Eosinophils_mature_CD14_chorionic_CD4 |
Association with transcript: | 0bp_to_ENST00000535987, ENST00000554212, ENST00000554617, ENST00000556324_5end |
EntrezGene: | FOS |
HGNC: | 3796 |
UniProt: | B4DQ65G3V5N9G3V289 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.13e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.13e-20 | 42 |
myeloid leukocyte | 2.78e-19 | 72 |
defensive cell | 5.45e-18 | 48 |
phagocyte | 5.45e-18 | 48 |
granulocyte monocyte progenitor cell | 2.37e-16 | 67 |
macrophage dendritic cell progenitor | 1.88e-15 | 61 |
leukocyte | 7.30e-15 | 136 |
monopoietic cell | 1.64e-14 | 59 |
monocyte | 1.64e-14 | 59 |
monoblast | 1.64e-14 | 59 |
promonocyte | 1.64e-14 | 59 |
myeloid lineage restricted progenitor cell | 2.10e-14 | 66 |
hematopoietic lineage restricted progenitor cell | 9.23e-11 | 120 |
nongranular leukocyte | 1.14e-10 | 115 |
myeloid cell | 2.23e-09 | 108 |
common myeloid progenitor | 2.23e-09 | 108 |
hematopoietic stem cell | 3.19e-09 | 168 |
hematopoietic cell | 9.37e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.15e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.93e-17 | 98 |
blood island | 1.93e-17 | 98 |
bone marrow | 7.86e-15 | 76 |
bone element | 2.89e-14 | 82 |
skeletal element | 6.61e-14 | 90 |
hemolymphoid system | 1.04e-13 | 108 |
skeletal system | 3.43e-11 | 100 |
immune system | 1.33e-10 | 93 |
adult organism | 1.53e-08 | 114 |