FFCP PHASE1:Hg19::chr10:105421427..105421470,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:105421427..105421470,-
|short_description=p1@SH3PXD2A
|description=CAGE_peak_1_at_SH3PXD2A_5end
|association_with_transcript=0bp_to_ENST00000538130_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9644 | |EntrezGene=9644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23664 | |HGNC=23664 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ35 | |UniProt=F5GZ35 | ||
|association_with_transcript=0bp_to_ENST00000538130_5end | |||
|cluster_id=chr10:105421427..105421470,- | |||
|description=CAGE_peak_1_at_SH3PXD2A_5end | |||
|id=chr10:105421427..105421470,- | |||
|ontology_enrichment_celltype=CL:0000055!1.33e-31!180;CL:0000057!3.56e-22!75;CL:0002620!1.65e-10!23;CL:0000183!6.51e-10!59;CL:0000680!7.18e-10!57;CL:0000056!7.18e-10!57;CL:0000355!7.18e-10!57;CL:0000187!2.31e-09!54;CL:0000393!9.34e-08!60;CL:0000211!9.34e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.25e-10;23!CL:0000057;1.39e-09;73!CL:0002334;9.10e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.69e-23,76;CL:0002620,1.29e-10,23;CL:0000680,1.87e-10,58;CL:0000056,1.87e-10,58;CL:0000355,1.87e-10,58;CL:0000187,6.11e-10,55;CL:0000393,2.91e-08,61;CL:0000211,2.91e-08,61;CL:0000192,7.62e-07,43;CL:0000514,7.62e-07,43;CL:0002334,9.11e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.74e-14!83;UBERON:0002329!2.74e-14!83;UBERON:0003077!2.74e-14!83;UBERON:0003059!2.74e-14!83;UBERON:0007282!2.74e-14!83;UBERON:0009618!2.74e-14!83;UBERON:0007285!2.74e-14!83;UBERON:0004290!2.28e-13!70;UBERON:0002385!3.72e-11!63;UBERON:0001015!3.72e-11!63;UBERON:0000383!3.72e-11!63;UBERON:0001134!8.38e-11!61;UBERON:0002036!8.38e-11!61;UBERON:0003082!8.38e-11!61;UBERON:0005256!8.61e-11!143;UBERON:0000486!2.40e-09!82;UBERON:0002199!3.87e-09!45;UBERON:0002416!3.87e-09!45;UBERON:0002100!1.43e-07!216;UBERON:0002097!2.89e-07!40;UBERON:0003102!3.76e-07!95;UBERON:0000475!5.95e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.79e-07;31!UBERON:0001015;3.79e-07;31!UBERON:0000383;3.79e-07;31!UBERON:0002384;5.28e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.88e-14,73;UBERON:0002329,5.02e-14,71;UBERON:0003059,5.02e-14,71;UBERON:0007282,5.02e-14,71;UBERON:0004290,5.02e-14,71;UBERON:0009618,5.02e-14,71;UBERON:0003077,7.88e-14,72;UBERON:0007285,7.88e-14,72;UBERON:0007503,1.05e-12,78;UBERON:0003104,3.25e-12,160;UBERON:0009142,3.25e-12,160;UBERON:0002385,9.12e-12,64;UBERON:0001015,9.12e-12,64;UBERON:0000383,9.12e-12,64;UBERON:0001134,2.08e-11,62;UBERON:0002036,2.08e-11,62;UBERON:0003082,2.08e-11,62;UBERON:0005256,2.44e-10,122;UBERON:0000486,7.78e-10,83;UBERON:0002199,1.35e-09,46;UBERON:0002416,1.35e-09,46;UBERON:0002097,1.11e-07,41;UBERON:0002100,6.72e-07,199 | |||
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| ||
|short_description=p1@SH3PXD2A | |||
}} | }} |
Latest revision as of 04:04, 16 September 2015
Short description: | p1@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SH3PXD2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538130_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | F5GZ35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.69e-23 | 76 |
skin fibroblast | 1.29e-10 | 23 |
muscle precursor cell | 1.87e-10 | 58 |
myoblast | 1.87e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.87e-10 | 58 |
muscle cell | 6.11e-10 | 55 |
electrically responsive cell | 2.91e-08 | 61 |
electrically active cell | 2.91e-08 | 61 |
smooth muscle cell | 7.62e-07 | 43 |
smooth muscle myoblast | 7.62e-07 | 43 |
preadipocyte | 9.11e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.88e-14 | 73 |
somite | 5.02e-14 | 71 |
presomitic mesoderm | 5.02e-14 | 71 |
presumptive segmental plate | 5.02e-14 | 71 |
dermomyotome | 5.02e-14 | 71 |
trunk paraxial mesoderm | 5.02e-14 | 71 |
paraxial mesoderm | 7.88e-14 | 72 |
presumptive paraxial mesoderm | 7.88e-14 | 72 |
epithelial vesicle | 1.05e-12 | 78 |
mesenchyme | 3.25e-12 | 160 |
entire embryonic mesenchyme | 3.25e-12 | 160 |
muscle tissue | 9.12e-12 | 64 |
musculature | 9.12e-12 | 64 |
musculature of body | 9.12e-12 | 64 |
skeletal muscle tissue | 2.08e-11 | 62 |
striated muscle tissue | 2.08e-11 | 62 |
myotome | 2.08e-11 | 62 |
trunk mesenchyme | 2.44e-10 | 122 |
multilaminar epithelium | 7.78e-10 | 83 |
integument | 1.35e-09 | 46 |
integumental system | 1.35e-09 | 46 |
skin of body | 1.11e-07 | 41 |
trunk | 6.72e-07 | 199 |