FFCP PHASE1:Hg19::chr10:10836803..10836831,-: Difference between revisions
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|id=chr10:10836803..10836831,-
|short_description=p3@SFTA1P
|description=CAGE_peak_3_at_SFTA1P_5end
|association_with_transcript=45bp_to_ENST00000446372,NR_027082,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=207107 | |EntrezGene=207107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=18383 | |HGNC=18383 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000446372,NR_027082,uc001ikf.1_5end | |||
|cluster_id=chr10:10836803..10836831,- | |||
|coexpression_cluster_id=C1562 | |||
|description=CAGE_peak_3_at_SFTA1P_5end | |||
|id=chr10:10836803..10836831,- | |||
|ontology_enrichment_celltype=CL:0000066!4.32e-15!254;CL:0000076!2.33e-11!62;CL:0000077!3.80e-11!19;CL:0002076!4.11e-09!43;CL:0002368!1.21e-07!13;CL:0002321!2.10e-07!248;CL:0000220!3.34e-07!246;CL:0002159!4.30e-07!13;CL:0000223!9.86e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000077;8.85e-12;19!CL:0002262;5.83e-08;2!CL:1000398;5.83e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.04e-11,19;CL:0000066,1.85e-10,253;CL:0002262,5.24e-08,2;CL:1000398,5.24e-08,2;CL:0000213,9.17e-07,58;CL:0000215,9.17e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!2.50e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.83e-08;2!UBERON:0003497;5.83e-08;2!UBERON:0003909;5.83e-08;2!UBERON:0003835;5.83e-08;2!UBERON:0002048;1.04e-07;22!UBERON:0000117;1.04e-07;22!UBERON:0000171;1.04e-07;22!UBERON:0000170;1.04e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,4.19e-09,82;UBERON:0001281,5.24e-08,2;UBERON:0003497,5.24e-08,2;UBERON:0003909,5.24e-08,2;UBERON:0003835,5.24e-08,2;UBERON:0002048,1.12e-07,22;UBERON:0000117,1.12e-07,22;UBERON:0000171,1.12e-07,22;UBERON:0000170,1.12e-07,22;UBERON:0005597,1.12e-07,22;UBERON:0000118,1.12e-07,22;UBERON:0004119,2.16e-07,160;UBERON:0000925,2.16e-07,160;UBERON:0006595,2.16e-07,160;UBERON:0000065,2.36e-07,54;UBERON:0008814,4.84e-07,18 | |||
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| ||
|short_description=p3@SFTA1P | |||
}} | }} |
Latest revision as of 06:25, 16 September 2015
Short description: | p3@SFTA1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SFTA1P_5end |
Coexpression cluster: | C1562_papillary_mesothelioma_oral_mucinous_Multipotent_Smooth_endometrial |
Association with transcript: | 45bp_to_ENST00000446372, NR_027082, uc001ikf.1_5end |
EntrezGene: | SFTA1P |
HGNC: | 18383 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.04e-11 | 19 |
epithelial cell | 1.85e-10 | 253 |
endothelial cell of sinusoid | 5.24e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.24e-08 | 2 |
lining cell | 9.17e-07 | 58 |
barrier cell | 9.17e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 4.19e-09 | 82 |
hepatic sinusoid | 5.24e-08 | 2 |
abdomen blood vessel | 5.24e-08 | 2 |
sinusoid | 5.24e-08 | 2 |
abdominal segment blood vessel | 5.24e-08 | 2 |
lung | 1.12e-07 | 22 |
respiratory tube | 1.12e-07 | 22 |
respiration organ | 1.12e-07 | 22 |
pair of lungs | 1.12e-07 | 22 |
lung primordium | 1.12e-07 | 22 |
lung bud | 1.12e-07 | 22 |
endoderm-derived structure | 2.16e-07 | 160 |
endoderm | 2.16e-07 | 160 |
presumptive endoderm | 2.16e-07 | 160 |
respiratory tract | 2.36e-07 | 54 |
pharyngeal arch system | 4.84e-07 | 18 |