FFCP PHASE1:Hg19::chr10:1089744..1089786,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:1089744..1089786,-
|short_description=p@chr10:1089744..1089786,-
|description=CAGE_peak_at_chr10:1089744..1089786,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:1089744..1089786,- | |||
|coexpression_cluster_id=C1103 | |||
|description=CAGE_peak_at_chr10:1089744..1089786,- | |||
|id=chr10:1089744..1089786,- | |||
|ontology_enrichment_celltype=CL:0000037!7.43e-45!172;CL:0000566!7.43e-45!172;CL:0000738!6.70e-43!140;CL:0002032!3.10e-41!165;CL:0000837!3.10e-41!165;CL:0000988!3.87e-41!182;CL:0002087!1.58e-39!119;CL:0002031!3.13e-37!124;CL:0000542!3.85e-34!53;CL:0000051!3.85e-34!53;CL:0000838!1.71e-33!52;CL:0000945!9.37e-19!24;CL:0000826!9.37e-19!24;CL:0000791!5.35e-17!18;CL:0000789!5.35e-17!18;CL:0002420!5.35e-17!18;CL:0002419!5.35e-17!18;CL:0000790!5.35e-17!18;CL:0000236!8.41e-14!14;CL:0000084!2.84e-13!25;CL:0000827!2.84e-13!25;CL:0000763!8.64e-13!112;CL:0000049!8.64e-13!112;CL:0002057!1.81e-12!42;CL:0000766!2.28e-12!76;CL:0000625!5.21e-11!11;CL:0000860!5.22e-11!45;CL:0000839!8.07e-10!70;CL:0000557!7.70e-09!71;CL:0002194!2.59e-08!63;CL:0000576!2.59e-08!63;CL:0000040!2.59e-08!63;CL:0000559!2.59e-08!63;CL:0002009!8.96e-08!65;CL:0002393!1.26e-07!9;CL:0002397!1.26e-07!9;CL:0000624!8.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.76e-27;53!CL:0000945;8.20e-26;24!CL:0000791;1.67e-25;18!CL:0000789;1.67e-25;18!CL:0002419;1.67e-25;18!CL:0000236;2.36e-22;13!CL:0000084;1.70e-19;25!CL:0000625;3.44e-18;11!CL:0002087;5.60e-13;104!CL:0000988;1.19e-08;177!CL:0000738;5.88e-08;136!CL:0000624;7.84e-08;6!CL:0000094;1.53e-07;8!CL:0000898;8.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.43e-49,52;CL:0000542,6.62e-48,53;CL:0000051,6.62e-48,53;CL:0000738,4.69e-41,136;CL:0000037,1.61e-38,168;CL:0002087,4.10e-38,115;CL:0002032,1.21e-36,161;CL:0000837,1.21e-36,161;CL:0000988,1.56e-35,177;CL:0002031,6.11e-34,120;CL:0000945,8.15e-26,24;CL:0000826,8.15e-26,24;CL:0000791,1.55e-25,18;CL:0000789,1.55e-25,18;CL:0002420,1.55e-25,18;CL:0002419,1.55e-25,18;CL:0000790,1.55e-25,18;CL:0000236,1.78e-20,14;CL:0000084,1.62e-19,25;CL:0000827,1.62e-19,25;CL:0000625,5.56e-18,11;CL:0000134,2.03e-08,354;CL:0000624,6.01e-08,6;CL:0002320,6.16e-08,361;CL:0000094,1.67e-07,8;CL:0000898,8.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.76e-27;53!CL:0000790;1.67e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.45e-17!102;UBERON:0003061!4.45e-17!102;UBERON:0002193!2.43e-16!112;UBERON:0000178!2.60e-10!15;UBERON:0000179!2.60e-10!15;UBERON:0000463!2.60e-10!15;UBERON:0002371!5.98e-08!80;UBERON:0002405!2.18e-07!115;UBERON:0007023!6.75e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.94e-15;15!UBERON:0000179;1.94e-15;15!UBERON:0000463;1.94e-15;15!UBERON:0002390;4.32e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.37e-15,15;UBERON:0000179,1.37e-15,15;UBERON:0000463,1.37e-15,15;UBERON:0002390,5.13e-11,98;UBERON:0003061,5.13e-11,98;UBERON:0002193,6.57e-11,108;UBERON:0002384,2.76e-07,371 | |||
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| ||
|short_description=p@chr10:1089744..1089786,- | |||
}} | }} |
Latest revision as of 10:13, 23 July 2015
Short description: | p@chr10:1089744..1089786, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:1089744..1089786, - |
Coexpression cluster: | C1103_CD19_CD4_CD8_Whole_blood_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.43e-49 | 52 |
lymphocyte | 6.62e-48 | 53 |
common lymphoid progenitor | 6.62e-48 | 53 |
leukocyte | 4.69e-41 | 136 |
hematopoietic stem cell | 1.61e-38 | 168 |
nongranular leukocyte | 4.10e-38 | 115 |
hematopoietic oligopotent progenitor cell | 1.21e-36 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-36 | 161 |
hematopoietic cell | 1.56e-35 | 177 |
hematopoietic lineage restricted progenitor cell | 6.11e-34 | 120 |
lymphocyte of B lineage | 8.15e-26 | 24 |
pro-B cell | 8.15e-26 | 24 |
mature alpha-beta T cell | 1.55e-25 | 18 |
alpha-beta T cell | 1.55e-25 | 18 |
immature T cell | 1.55e-25 | 18 |
mature T cell | 1.55e-25 | 18 |
immature alpha-beta T cell | 1.55e-25 | 18 |
B cell | 1.78e-20 | 14 |
T cell | 1.62e-19 | 25 |
pro-T cell | 1.62e-19 | 25 |
CD8-positive, alpha-beta T cell | 5.56e-18 | 11 |
mesenchymal cell | 2.03e-08 | 354 |
CD4-positive, alpha-beta T cell | 6.01e-08 | 6 |
connective tissue cell | 6.16e-08 | 361 |
granulocyte | 1.67e-07 | 8 |
naive T cell | 8.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.37e-15 | 15 |
haemolymphatic fluid | 1.37e-15 | 15 |
organism substance | 1.37e-15 | 15 |
hematopoietic system | 5.13e-11 | 98 |
blood island | 5.13e-11 | 98 |
hemolymphoid system | 6.57e-11 | 108 |
connective tissue | 2.76e-07 | 371 |