FFCP PHASE1:Hg19::chr15:52960979..52960981,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:52960979..52960981,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr15:52960979..52960981,- | |description=CAGE_peak_at_chr15:52960979..52960981,- | ||
|id=chr15:52960979..52960981,- | |id=chr15:52960979..52960981,- | ||
|ontology_enrichment_celltype=CL:0000838!8.83e-13!52;CL:0000542!2.77e-12!53;CL:0000051!2.77e-12!53;CL:0000945!5.05e-09!24;CL:0000826!5.05e-09!24 | |ontology_enrichment_celltype=CL:0000838!8.83e-13!52;CL:0000542!2.77e-12!53;CL:0000051!2.77e-12!53;CL:0000945!5.05e-09!24;CL:0000826!5.05e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000623;5.78e-16;3!CL:0000542;1.44e-12;53!CL:0000791;5.76e-10;18!CL:0000789;5.76e-10;18!CL:0002419;5.76e-10;18!CL:0000236;2.19e-09;13!CL:0000084;2.54e-09;25!CL:0000624;3.22e-08;6!CL:0000775;3.22e-08;3!CL:0000945;6.51e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.27e-21,52;CL:0000542,3.80e-21,53;CL:0000051,3.80e-21,53;CL:0000623,3.24e-16,3;CL:0000825,3.24e-16,3;CL:0000738,1.74e-10,136;CL:0002087,3.20e-10,115;CL:0000791,7.20e-10,18;CL:0000789,7.20e-10,18;CL:0002420,7.20e-10,18;CL:0002419,7.20e-10,18;CL:0000790,7.20e-10,18;CL:0000084,3.64e-09,25;CL:0000827,3.64e-09,25;CL:0000236,5.21e-09,14;CL:0002031,1.96e-08,120;CL:0000775,2.86e-08,3;CL:0000624,4.09e-08,6;CL:0000037,1.10e-07,168;CL:0002032,3.18e-07,161;CL:0000837,3.18e-07,161;CL:0000945,4.05e-07,24;CL:0000826,4.05e-07,24;CL:0000988,4.40e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.44e-12;53!CL:0000790;5.76e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.91e-11!57;UBERON:0005068!3.91e-11!57;UBERON:0006241!3.91e-11!57;UBERON:0007135!3.91e-11!57;UBERON:0002346!3.21e-09!90;UBERON:0007023!7.06e-09!115;UBERON:0002616!1.37e-08!59;UBERON:0003075!2.53e-08!86;UBERON:0007284!2.53e-08!86;UBERON:0003080!3.32e-08!42;UBERON:0001017!6.20e-08!82;UBERON:0002780!1.11e-07!41;UBERON:0001890!1.11e-07!41;UBERON:0006240!1.11e-07!41;UBERON:0000955!1.76e-07!69;UBERON:0006238!1.76e-07!69;UBERON:0005743!1.91e-07!86;UBERON:0000073!4.33e-07!94;UBERON:0001016!4.33e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.09e-11;2!UBERON:0001875;6.09e-11;2!UBERON:0002757;6.09e-11;2!UBERON:0010134;6.09e-11;2!UBERON:0005408;6.09e-11;2!UBERON:0006514;6.09e-11;2!UBERON:0001899;6.09e-11;2!UBERON:0009663;4.20e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,1.06e-10,2;UBERON:0006514,1.06e-10,2;UBERON:0001905,2.03e-10,2;UBERON:0002757,2.03e-10,2;UBERON:0010134,2.03e-10,2;UBERON:0005408,2.03e-10,2;UBERON:0001899,2.03e-10,2;UBERON:0009663,5.04e-07,7 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,2.00146596706261,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,0.152826811495903,0,0,0,0,0,0,0,0,0.154934401160603,1.27952309238679,0.587200878669695,0,0.802177789880567,0.434021741431704,0.223915474239924,0,0,0,0,0.242584061187816,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0.16072558669708,0,0.19891667719909,0,1.75996244461323,0.546138611262131,0.889509253863555,1.28019066769952,0,0,0.661044872784862,0.954053754535364,1.70763890732835,1.76171156811282,1.91136614062614,0,1.12101712596307,0,1.37696839079683,2.35806457649499,1.02800749499755,0.167186495390678,0.651844533267181,0.473447805734733,0,0,0.589211814949674,0,0.812411591295047,0.384273959177026,0.910415432919148,0.657751618414705,0.276350017785848,0,0,0.802622484269139,2.09071047609954,0.339928028092699,0,1.03088233644789,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,2.01606743224732,3.4767225451856,2.02754165435919,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.351339142772504,0.130979075497713,0.364295288292542,0,0,0,0.132957960518865,1.43094374583205,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0.66944122552934,0.402829317109147,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0.103052529238439,0.772921620136887,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0.336255431980582,1.18218456121156,1.94064817373566,2.56686072559497,0,0,0,0,0.637938751653163,2.99602809578873,17.9496875522415,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0,1.49418580924822,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.165018999841176,0,0,0,0,0,0,0,0.322260734604821,0,0,0,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0.411362273086194,0,0,1.58625035258854,0,0,0,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0.562677665642051,0,0,1.26675244876796,0.398495976502139,0.276283915531148,0.503865495708552,0,0.492339221844278,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.349839999984783,0.724999575434793,0.227586896570999,0,0,0,0.583209226766509,0,2.65722415744152,0.361789315876224,1.52581736317083,0.995213339381022,0.591095237907095,0.219385397153973,0,0.139423744278603,0.307801034015188,0.113942055847001,0.23056390438806,0.179515288819544,0.108647371922008,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.176915129006678,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0.269604531922708,0,0.234264445725339,0.729819156862664,0.782658475728359,0,0,0,0.30607276163049,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.343972064943233,0,0,0.0821154570532092,0,0,0,0.137041924646751,0,0.189932387867636,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0.229073192331831,0.857974989309823,0.14405479798815,0,0,0,0.313808538937,0,0,1.20084057741958,1.09524303113594,0,0,0.262887354279314,0.558564802544508,1.3749625440701,0.717873024576814,0.399358000997982,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0.226624183040251,0.439656701034247,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0.414239055347196,0,0.197611631897944,0.487170393523584,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.3755727921195,0,0.332787154610557,0.124192805882767,0.138348634936231,0,0.151649117541648,1.14186133417987,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr15:52960979..52960981,- | |short_description=p@chr15:52960979..52960981,- | ||
}} | }} |
Latest revision as of 02:35, 25 July 2015
Short description: | p@chr15:52960979..52960981, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:52960979..52960981, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.27e-21 | 52 |
lymphocyte | 3.80e-21 | 53 |
common lymphoid progenitor | 3.80e-21 | 53 |
natural killer cell | 3.24e-16 | 3 |
pro-NK cell | 3.24e-16 | 3 |
leukocyte | 1.74e-10 | 136 |
nongranular leukocyte | 3.20e-10 | 115 |
mature alpha-beta T cell | 7.20e-10 | 18 |
alpha-beta T cell | 7.20e-10 | 18 |
immature T cell | 7.20e-10 | 18 |
mature T cell | 7.20e-10 | 18 |
immature alpha-beta T cell | 7.20e-10 | 18 |
T cell | 3.64e-09 | 25 |
pro-T cell | 3.64e-09 | 25 |
B cell | 5.21e-09 | 14 |
hematopoietic lineage restricted progenitor cell | 1.96e-08 | 120 |
neutrophil | 2.86e-08 | 3 |
CD4-positive, alpha-beta T cell | 4.09e-08 | 6 |
hematopoietic stem cell | 1.10e-07 | 168 |
hematopoietic oligopotent progenitor cell | 3.18e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.18e-07 | 161 |
lymphocyte of B lineage | 4.05e-07 | 24 |
pro-B cell | 4.05e-07 | 24 |
hematopoietic cell | 4.40e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
globus pallidus | 1.06e-10 | 2 |
pallidum | 1.06e-10 | 2 |
pineal body | 2.03e-10 | 2 |
regional part of epithalamus | 2.03e-10 | 2 |
secretory circumventricular organ | 2.03e-10 | 2 |
circumventricular organ | 2.03e-10 | 2 |
epithalamus | 2.03e-10 | 2 |
telencephalic nucleus | 5.04e-07 | 7 |