FFCP PHASE1:Mm9::chr7:31936409..31936433,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52857 | |EntrezGene=52857 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VEF1,F8WJ74 | |UniProt=Q8VEF1,F8WJ74 | ||
|association_with_transcript=-340bp_to_ENSMUST00000001280,ENSMUST00000085636,NM_027898,uc009gif.1,uc009gig.1_5end | |association_with_transcript=-340bp_to_ENSMUST00000001280,ENSMUST00000085636,NM_027898,uc009gif.1,uc009gig.1_5end | ||
|cluster_id=chr7:31936409..31936433,- | |||
|description=CAGE_peak_4_at_Gramd1a_5end | |description=CAGE_peak_4_at_Gramd1a_5end | ||
|id=chr7:31936409..31936433,- | |id=chr7:31936409..31936433,- | ||
|ontology_enrichment_celltype=CL:0000838!1.20e-14!12;CL:0000084!1.61e-13!11;CL:0000827!1.61e-13!11;CL:0000542!2.94e-13!13;CL:0000051!2.94e-13!13;CL:0000791!5.71e-11!9;CL:0000789!5.71e-11!9;CL:0002420!5.71e-11!9;CL:0002419!5.71e-11!9;CL:0000790!5.71e-11!9;CL:0000893!6.27e-10!6;CL:0002489!6.27e-10!6;CL:0000898!6.27e-10!6;CL:0000809!6.27e-10!6;CL:0000810!6.27e-10!6;CL:0000895!6.27e-10!6;CL:0000808!6.27e-10!6;CL:0000894!6.27e-10!6;CL:0000806!6.27e-10!6;CL:0000807!6.27e-10!6;CL:0000805!6.27e-10!6;CL:0002425!6.27e-10!6;CL:0002436!6.27e-10!6;CL:0002427!6.27e-10!6;CL:0002428!6.27e-10!6;CL:0002429!6.27e-10!6;CL:0002433!6.27e-10!6;CL:0002431!6.27e-10!6;CL:0002432!6.27e-10!6;CL:0000624!1.29e-09!8;CL:0000738!2.32e-09!17;CL:0002087!2.32e-09!17;CL:0000988!3.29e-07!32;CL:0002032!3.29e-07!32;CL:0000037!3.29e-07!32;CL:0000566!3.29e-07!32;CL:0000837!3.29e-07!32 | |ontology_enrichment_celltype=CL:0000838!1.20e-14!12;CL:0000084!1.61e-13!11;CL:0000827!1.61e-13!11;CL:0000542!2.94e-13!13;CL:0000051!2.94e-13!13;CL:0000791!5.71e-11!9;CL:0000789!5.71e-11!9;CL:0002420!5.71e-11!9;CL:0002419!5.71e-11!9;CL:0000790!5.71e-11!9;CL:0000893!6.27e-10!6;CL:0002489!6.27e-10!6;CL:0000898!6.27e-10!6;CL:0000809!6.27e-10!6;CL:0000810!6.27e-10!6;CL:0000895!6.27e-10!6;CL:0000808!6.27e-10!6;CL:0000894!6.27e-10!6;CL:0000806!6.27e-10!6;CL:0000807!6.27e-10!6;CL:0000805!6.27e-10!6;CL:0002425!6.27e-10!6;CL:0002436!6.27e-10!6;CL:0002427!6.27e-10!6;CL:0002428!6.27e-10!6;CL:0002429!6.27e-10!6;CL:0002433!6.27e-10!6;CL:0002431!6.27e-10!6;CL:0002432!6.27e-10!6;CL:0000624!1.29e-09!8;CL:0000738!2.32e-09!17;CL:0002087!2.32e-09!17;CL:0000988!3.29e-07!32;CL:0002032!3.29e-07!32;CL:0000037!3.29e-07!32;CL:0000566!3.29e-07!32;CL:0000837!3.29e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.92e-40,11;CL:0000827,4.92e-40,11;CL:0000838,1.26e-36,12;CL:0000542,9.72e-34,13;CL:0000051,9.72e-34,13;CL:0000791,1.93e-30,9;CL:0000789,1.93e-30,9;CL:0002420,1.93e-30,9;CL:0002419,1.93e-30,9;CL:0000790,1.93e-30,9;CL:0000738,1.40e-25,17;CL:0002087,1.40e-25,17;CL:0000624,1.96e-25,8;CL:0000893,3.91e-24,6;CL:0002489,3.91e-24,6;CL:0000898,3.91e-24,6;CL:0000809,3.91e-24,6;CL:0000810,3.91e-24,6;CL:0000895,3.91e-24,6;CL:0000808,3.91e-24,6;CL:0000894,3.91e-24,6;CL:0000806,3.91e-24,6;CL:0000807,3.91e-24,6;CL:0000805,3.91e-24,6;CL:0002425,3.91e-24,6;CL:0002436,3.91e-24,6;CL:0002427,3.91e-24,6;CL:0002428,3.91e-24,6;CL:0002429,3.91e-24,6;CL:0002433,3.91e-24,6;CL:0002431,3.91e-24,6;CL:0002432,3.91e-24,6;CL:0002031,4.46e-17,25;CL:0000988,3.18e-16,32;CL:0002032,3.18e-16,32;CL:0000037,3.18e-16,32;CL:0000837,3.18e-16,32;CL:0002320,3.15e-13,46;CL:0000134,3.15e-13,46;CL:0000034,4.21e-11,97;CL:0000219,4.71e-11,54;CL:0000723,3.62e-07,91;CL:0000048,3.62e-07,91;CL:0000625,6.93e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.15e-13,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,9.57363310631334,18.4910975794375,1.19852577757853,1.99430397488341,0.684802919724823,2.01066925563694,0,0,0,0,0.137114433605739,0,0.17008658030214,1.09220046320974,1.04479915655574,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,1.0470474879476,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0.335565212115473,0,1.34437519656986,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0.372798891650601,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.479260498023681,1.19980546198682,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69978429993855,1.81936888020755,1.52019971184866,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.504832249740738,0,0,0,0.288635524920988,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.16210991097419,9.57363310631334,18.4910975794375,1.19852577757853,1.99430397488341,0.684802919724823,2.01066925563694,0,0,0,0,0.137114433605739,0,0.17008658030214,1.09220046320974,1.04479915655574,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,1.0470474879476,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0.335565212115473,0,1.34437519656986,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0.372798891650601,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.479260498023681,1.19980546198682,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69978429993855,1.81936888020755,1.52019971184866,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.504832249740738,0,0,0,0.288635524920988,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p4@Gramd1a | |short_description=p4@Gramd1a | ||
}} | }} |
Latest revision as of 15:49, 26 September 2015
Short description: | p4@Gramd1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gramd1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -340bp_to_ENSMUST00000001280, ENSMUST00000085636, NM_027898, uc009gif.1, uc009gig.1_5end |
EntrezGene: | Gramd1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.15e-13 | 46 |