FFCP PHASE1:Hg19::chr11:19218311..19218319,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000527978_5end | |association_with_transcript=-2bp_to_ENST00000527978_5end | ||
|cluster_id=chr11:19218311..19218319,+ | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_3_at_ENST00000527978_5end | |description=CAGE_peak_3_at_ENST00000527978_5end | ||
|id=chr11:19218311..19218319,+ | |id=chr11:19218311..19218319,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.74e-15;29 | |||
|ontology_enrichment_disease=DOID:178!3.08e-12!1;DOID:326!3.08e-12!1;DOID:3978!3.08e-12!1;DOID:3394!3.08e-12!1;DOID:5844!3.08e-12!1;DOID:114!9.54e-07!2 | |ontology_enrichment_disease=DOID:178!3.08e-12!1;DOID:326!3.08e-12!1;DOID:3978!3.08e-12!1;DOID:3394!3.08e-12!1;DOID:5844!3.08e-12!1;DOID:114!9.54e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.13e-23!2;UBERON:0000341!2.49e-23!2;UBERON:0002135!8.85e-13!1;UBERON:0007023!2.70e-08!115;UBERON:0003126!2.02e-07!7;UBERON:0001005!2.02e-07!7;UBERON:0002133!5.11e-07!2;UBERON:0000007!7.20e-07!2 | |ontology_enrichment_uberon=UBERON:0003127!1.13e-23!2;UBERON:0000341!2.49e-23!2;UBERON:0002135!8.85e-13!1;UBERON:0007023!2.70e-08!115;UBERON:0003126!2.02e-07!7;UBERON:0001005!2.02e-07!7;UBERON:0002133!5.11e-07!2;UBERON:0000007!7.20e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;4.52e-50;2!UBERON:0003126;1.91e-15;7!UBERON:0001005;1.91e-15;7!UBERON:0005178;1.58e-09;34!UBERON:0002224;1.58e-09;34!UBERON:0007196;5.93e-08;15!UBERON:0001558;5.93e-08;15!UBERON:0000065;3.40e-07;44!UBERON:0000915;7.93e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.52e-50,2;UBERON:0003126,1.91e-15,7;UBERON:0001005,1.91e-15,7;UBERON:0005178,6.62e-13,34;UBERON:0002224,6.62e-13,34;UBERON:0005181,1.42e-12,35;UBERON:0008947,1.10e-11,38;UBERON:0003258,1.10e-11,38;UBERON:0000915,6.99e-09,52;UBERON:0000065,1.34e-08,54;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15 | |||
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|short_description=p3@ENST00000527978 | |short_description=p3@ENST00000527978 | ||
}} | }} |
Latest revision as of 20:47, 23 July 2015
Short description: | p3@ENST00000527978 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000527978_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | -2bp_to_ENST00000527978_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.52e-50 | 2 |
trachea | 1.91e-15 | 7 |
respiratory airway | 1.91e-15 | 7 |
thoracic cavity element | 6.62e-13 | 34 |
thoracic cavity | 6.62e-13 | 34 |
thoracic segment organ | 1.42e-12 | 35 |
respiratory primordium | 1.10e-11 | 38 |
endoderm of foregut | 1.10e-11 | 38 |
thoracic segment of trunk | 6.99e-09 | 52 |
respiratory tract | 1.34e-08 | 54 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |