FFCP PHASE1:Hg19::chr15:86173028..86173031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:86173028..86173031,+ | |||
|coexpression_cluster_id=C1720 | |||
|description=CAGE_peak_at_chr15:86173028..86173031,+ | |description=CAGE_peak_at_chr15:86173028..86173031,+ | ||
|id=chr15:86173028..86173031,+ | |id=chr15:86173028..86173031,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.54e-27!140;CL:0002057!2.31e-24!42;CL:0000860!2.57e-24!45;CL:0002031!5.75e-24!124;CL:0000557!8.83e-24!71;CL:0002087!4.50e-23!119;CL:0000839!3.64e-21!70;CL:0002009!9.61e-21!65;CL:0000766!1.15e-20!76;CL:0002194!1.87e-19!63;CL:0000576!1.87e-19!63;CL:0000040!1.87e-19!63;CL:0000559!1.87e-19!63;CL:0000037!4.66e-19!172;CL:0000566!4.66e-19!172;CL:0002032!1.88e-16!165;CL:0000837!1.88e-16!165;CL:0000988!1.08e-15!182;CL:0000763!2.11e-12!112;CL:0000049!2.11e-12!112 | |ontology_enrichment_celltype=CL:0000738!1.54e-27!140;CL:0002057!2.31e-24!42;CL:0000860!2.57e-24!45;CL:0002031!5.75e-24!124;CL:0000557!8.83e-24!71;CL:0002087!4.50e-23!119;CL:0000839!3.64e-21!70;CL:0002009!9.61e-21!65;CL:0000766!1.15e-20!76;CL:0002194!1.87e-19!63;CL:0000576!1.87e-19!63;CL:0000040!1.87e-19!63;CL:0000559!1.87e-19!63;CL:0000037!4.66e-19!172;CL:0000566!4.66e-19!172;CL:0002032!1.88e-16!165;CL:0000837!1.88e-16!165;CL:0000988!1.08e-15!182;CL:0000763!2.11e-12!112;CL:0000049!2.11e-12!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-36;33!CL:0002057;1.39e-36;33!CL:0000473;5.02e-25;39!CL:0000234;5.02e-25;39!CL:0000576;3.35e-23;48!CL:0000766;2.98e-15;69!CL:0002087;7.15e-12;104!CL:0000738;1.53e-08;136!CL:0000624;4.57e-07;6!CL:0000623;8.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.19e-42,42;CL:0002057,6.19e-42,42;CL:0000738,2.23e-39,136;CL:0000557,6.66e-38,67;CL:0000473,3.57e-35,48;CL:0000234,3.57e-35,48;CL:0002031,1.65e-34,120;CL:0000839,1.18e-32,66;CL:0000766,2.09e-32,72;CL:0002009,4.10e-32,61;CL:0002087,5.58e-32,115;CL:0002194,2.02e-29,59;CL:0000576,2.02e-29,59;CL:0000040,2.02e-29,59;CL:0000559,2.02e-29,59;CL:0000037,5.19e-29,168;CL:0000988,1.71e-26,177;CL:0002032,3.41e-25,161;CL:0000837,3.41e-25,161;CL:0000763,1.07e-21,108;CL:0000049,1.07e-21,108;CL:0000624,3.95e-07,6;CL:0000623,8.64e-07,3;CL:0000825,8.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.18e-30;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.40e-18!80;UBERON:0001474!4.98e-17!86;UBERON:0002390!3.21e-16!102;UBERON:0003061!3.21e-16!102;UBERON:0002193!1.45e-14!112;UBERON:0004765!1.92e-12!101;UBERON:0001434!1.92e-12!101;UBERON:0002405!3.13e-12!115;UBERON:0007023!9.31e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.68e-32,76;UBERON:0001474,2.15e-28,82;UBERON:0002405,3.69e-27,93;UBERON:0002390,3.95e-27,98;UBERON:0003061,3.95e-27,98;UBERON:0002193,1.50e-25,108;UBERON:0004765,1.22e-24,90;UBERON:0001434,8.11e-21,100;UBERON:0003081,3.98e-11,203;UBERON:0002204,1.99e-09,167 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0.376627918784408,0.687720651731561,0.246301768349837,0.629686250509434,0,4.60595277716655,1.54816123316076,0,0,0,0.46480320348181,0.426507697462265,0.293600439334847,32.1317336948489,21.4582558793052,16.058804432973,0.671746422719773,1.94336199611388,0.515151135268373,1.01778767145695,0.755751887377619,1.69808842831471,2.32429036905685,1.23350366406548,3.09706370895104,2.3015391385772,3.33008918487831,2.83778675866302,2.06847408441971,3.22742341791913,1.35426486594342,2.07066573496865,1.36453075028923,1.12361742222542,3.67300670845083,2.24650318953266,4.47535988059329,1.9791078011203,2.59302754908121,2.55734850319616,2.03146467040009,2.26954089876456,3.73693349397345,6.02996796616184,7.82224377630302,3.69221035998698,1.21079900526674,1.84138817993782,0.949387162322653,0.422510572623884,0.637812899895131,0.838634582033504,1.57260083605093,1.20141514273205,1.44653028027372,1.71007646244749,0.79566670879636,1.27864907635244,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,0.661044872784862,0,3.41527781465669,2.93618594685469,3.05818582500183,2.64342657158052,0,0.263384084775077,3.93419540227666,11.7903228824749,3.90642848099067,0.501559486172034,0.32592226663359,0.473447805734733,0,0.445641827540694,1.47302953737419,1.10766947291811,2.70803863765016,1.66518715643378,0.780356085359269,1.15106533222573,0.829050053357545,0.289803085735052,0.889719378972363,0.802622484269139,1.04535523804977,0.793165398882963,1.14966148080576,0.34362744548263,1.01207876807801,0,0,0,0,0,0,0,0,3.62892137804518,9.89528724398977,3.91025890483557,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0.661743720148475,0.221729397462564,1.14185221401064,0.72038491523742,0,0,0.324547393654683,0.174129737299267,0.531831842075461,2.62339686735876,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.892997282840798,0,0.563057402416611,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0,0.421352420106746,0,0.491337269247072,0,0,0,0,0,0.336672227908132,0.500474079487857,0,0,0,0,0.113432183160021,0,0.427114777637135,0,0.300091096084402,0,0,0,0.843881661206331,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0.882926198829301,0.245976877086227,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0,0.246217006087397,0.468008530278475,0.297262324577456,0,0,0,0.0895585227028483,0.290633938513962,0,4.43396914106349,0.264145302039678,2.69526550203004,11.097236413106,4.16600030307054,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,8.47232268868287,13.3689096412901,9.49738468470138,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0.623912584592421,0,0.630809660135739,0.117141414992713,0,0,1.03473071292505,0,0,0.260650843404249,0,0,4.9624326269493,6.47142602455851,4.05564719653088,0,0,0,0.248107807818777,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0.261435451024901,0,0,0,1.44257416306811,0.183138929636687,0.247528499761764,0,0,0,0.290012154876366,0.154048617114644,0.460511024178389,0,0.644521469209642,0.725083469571143,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.633322905892992,0,0,0,0,0,0,1.03558180854457,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0.320472213382419,0,0,0.743212700502875,0.28853842595289,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0.556812347790485,0,0,0.66614393599564,0,0,0.146508179271894,0.36408156524854,0.111443384277478,1.13654458722565,0.23874448473769,0,0.307160702099232,0,0.703347082052564,0.111308705022906,0.329607748453519,1.90012867315194,2.59022384726391,0,0.755798243562828,0.613612095012929,1.47701766553283,0,0.359473404589307,0.716084698702437,0,1.08507746200627,0,0,0,0.278304294485554,0,0.260427761085233,0,0.724999575434793,0.910347586283997,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,1.08536794762867,0,0.221158519862449,0,0.219385397153973,0.108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| ||
|short_description=p@chr15:86173028..86173031,+ | |short_description=p@chr15:86173028..86173031,+ | ||
}} | }} |
Latest revision as of 05:08, 25 July 2015
Short description: | p@chr15:86173028..86173031, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:86173028..86173031, + |
Coexpression cluster: | C1720_CD14_CD8_Mast_Natural_CD4_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.19e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.19e-42 | 42 |
leukocyte | 2.23e-39 | 136 |
granulocyte monocyte progenitor cell | 6.66e-38 | 67 |
defensive cell | 3.57e-35 | 48 |
phagocyte | 3.57e-35 | 48 |
hematopoietic lineage restricted progenitor cell | 1.65e-34 | 120 |
myeloid lineage restricted progenitor cell | 1.18e-32 | 66 |
myeloid leukocyte | 2.09e-32 | 72 |
macrophage dendritic cell progenitor | 4.10e-32 | 61 |
nongranular leukocyte | 5.58e-32 | 115 |
monopoietic cell | 2.02e-29 | 59 |
monocyte | 2.02e-29 | 59 |
monoblast | 2.02e-29 | 59 |
promonocyte | 2.02e-29 | 59 |
hematopoietic stem cell | 5.19e-29 | 168 |
hematopoietic cell | 1.71e-26 | 177 |
hematopoietic oligopotent progenitor cell | 3.41e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.41e-25 | 161 |
myeloid cell | 1.07e-21 | 108 |
common myeloid progenitor | 1.07e-21 | 108 |
CD4-positive, alpha-beta T cell | 3.95e-07 | 6 |
natural killer cell | 8.64e-07 | 3 |
pro-NK cell | 8.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.68e-32 | 76 |
bone element | 2.15e-28 | 82 |
immune system | 3.69e-27 | 93 |
hematopoietic system | 3.95e-27 | 98 |
blood island | 3.95e-27 | 98 |
hemolymphoid system | 1.50e-25 | 108 |
skeletal element | 1.22e-24 | 90 |
skeletal system | 8.11e-21 | 100 |
lateral plate mesoderm | 3.98e-11 | 203 |
musculoskeletal system | 1.99e-09 | 167 |