FFCP PHASE1:Hg19::chr11:31816236..31816261,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:31816236..31816261,- | |||
|coexpression_cluster_id=C798 | |||
|description=CAGE_peak_at_chr11:31816236..31816261,- | |description=CAGE_peak_at_chr11:31816236..31816261,- | ||
|id=chr11:31816236..31816261,- | |id=chr11:31816236..31816261,- | ||
|ontology_enrichment_celltype=CL:0000133!1.05e-07!59;CL:0000064!1.49e-07!3;CL:0005012!1.49e-07!3;CL:0000067!1.49e-07!3;CL:0002304!1.49e-07!3;CL:0002605!4.59e-07!3;CL:0000128!7.13e-07!7;CL:0000126!7.13e-07!7;CL:0000127!7.13e-07!7;CL:0002453!7.13e-07!7 | |ontology_enrichment_celltype=CL:0000133!1.05e-07!59;CL:0000064!1.49e-07!3;CL:0005012!1.49e-07!3;CL:0000067!1.49e-07!3;CL:0002304!1.49e-07!3;CL:0002605!4.59e-07!3;CL:0000128!7.13e-07!7;CL:0000126!7.13e-07!7;CL:0000127!7.13e-07!7;CL:0002453!7.13e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.67e-37;3!CL:0000067;1.67e-37;3!CL:0005012;1.67e-37;3!CL:0002304;1.67e-37;3!CL:0000342;1.04e-13;1!CL:0002565;1.04e-13;1!CL:0000306;2.50e-13;4!CL:0002222;2.50e-13;4!CL:0002224;2.50e-13;4!CL:0000075;2.09e-11;27!CL:0000047;1.05e-07;2!CL:0002535;1.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.08e-37,3;CL:0000067,1.08e-37,3;CL:0005012,1.08e-37,3;CL:0002304,1.08e-37,3;CL:0000342,1.42e-13,1;CL:0002565,1.42e-13,1;CL:0000306,2.84e-13,4;CL:0002222,2.84e-13,4;CL:0002224,2.84e-13,4;CL:0000075,2.02e-11,27;CL:0002535,1.12e-07,2;CL:0000047,3.90e-07,8;CL:0000133,5.21e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.94e-17;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.67e-09!143 | |ontology_enrichment_disease=DOID:0050687!7.67e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:154;1.05e-07;2!DOID:4236;1.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,9.87e-08,2;DOID:4236,9.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003075!2.24e-34!86;UBERON:0007284!2.24e-34!86;UBERON:0002346!6.93e-34!90;UBERON:0003056!3.45e-31!61;UBERON:0001049!2.43e-30!57;UBERON:0005068!2.43e-30!57;UBERON:0006241!2.43e-30!57;UBERON:0007135!2.43e-30!57;UBERON:0001017!2.68e-28!82;UBERON:0005743!4.81e-28!86;UBERON:0000073!3.41e-27!94;UBERON:0001016!3.41e-27!94;UBERON:0002616!4.14e-27!59;UBERON:0000955!4.70e-26!69;UBERON:0006238!4.70e-26!69;UBERON:0002780!7.10e-26!41;UBERON:0001890!7.10e-26!41;UBERON:0006240!7.10e-26!41;UBERON:0003080!4.43e-25!42;UBERON:0001893!5.29e-25!34;UBERON:0001869!1.09e-24!32;UBERON:0002791!7.25e-24!33;UBERON:0002020!3.09e-23!34;UBERON:0003528!3.09e-23!34;UBERON:0000033!5.02e-21!123;UBERON:0000924!4.99e-20!173;UBERON:0006601!4.99e-20!173;UBERON:0004121!6.84e-20!169;UBERON:0000153!1.92e-19!129;UBERON:0007811!1.92e-19!129;UBERON:0000956!4.84e-17!25;UBERON:0000203!4.84e-17!25;UBERON:0001950!2.97e-14!20;UBERON:0002619!1.07e-12!22;UBERON:0001871!1.26e-11!7;UBERON:0002420!2.31e-10!9;UBERON:0007245!2.31e-10!9;UBERON:0010009!2.31e-10!9;UBERON:0010011!2.31e-10!9;UBERON:0000454!2.31e-10!9;UBERON:0000488!1.73e-09!4;UBERON:0007625!6.19e-09!11;UBERON:0000970!8.17e-09!20;UBERON:0001801!9.71e-09!14;UBERON:0007023!1.23e-08!115;UBERON:0000369!1.75e-08!4;UBERON:0002435!1.75e-08!4;UBERON:0000204!1.75e-08!4;UBERON:0010082!1.75e-08!4;UBERON:0000064!2.57e-08!219;UBERON:0000483!2.67e-08!309;UBERON:0002104!2.81e-08!21;UBERON:0000119!4.43e-08!312;UBERON:0002308!1.18e-07!9;UBERON:0000125!1.18e-07!9;UBERON:0000200!1.36e-07!6;UBERON:0001778!1.49e-07!3;UBERON:0001775!1.49e-07!3;UBERON:0000019!1.66e-07!19;UBERON:0000047!1.66e-07!19;UBERON:0004088!1.66e-07!19;UBERON:0003072!1.66e-07!19;UBERON:0003071!1.66e-07!19;UBERON:0004128!1.66e-07!19;UBERON:0000020!2.37e-07!23;UBERON:0009663!3.76e-07!7;UBERON:0005383!4.59e-07!3;UBERON:0005382!4.59e-07!3;UBERON:0001032!6.02e-07!24;UBERON:0004456!6.02e-07!24;UBERON:0002771!6.56e-07!3;UBERON:0000025!8.99e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;2.20e-49;4!UBERON:0007625;6.62e-40;11!UBERON:0001778;1.67e-37;3!UBERON:0001775;1.67e-37;3!UBERON:0002203;4.31e-33;6!UBERON:0001768;4.31e-33;6!UBERON:0002200;4.31e-33;6!UBERON:0001801;2.49e-31;14!UBERON:0000970;1.39e-29;20!UBERON:0002104;3.72e-28;21!UBERON:0000020;1.14e-25;23!UBERON:0001032;1.39e-24;24!UBERON:0004456;1.39e-24;24!UBERON:0000019;4.85e-23;19!UBERON:0000047;4.85e-23;19!UBERON:0004088;4.85e-23;19!UBERON:0010230;4.85e-23;19!UBERON:0001456;7.94e-21;21!UBERON:0006876;3.12e-18;11!UBERON:0002506;1.04e-13;1!UBERON:0001769;1.04e-13;1!UBERON:0010371;1.18e-13;31!UBERON:0010077;2.50e-13;4!UBERON:0005389;2.50e-13;4!UBERON:0000484;2.50e-13;4!UBERON:0000965;2.50e-13;4!UBERON:0001803;2.50e-13;4!UBERON:0002037;3.41e-09;6!UBERON:0006955;1.05e-07;2!UBERON:0004801;1.05e-07;2!UBERON:0002771;1.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.95e-49,4;UBERON:0007625,7.11e-40,11;UBERON:0001778,1.08e-37,3;UBERON:0001775,1.08e-37,3;UBERON:0002203,3.98e-33,6;UBERON:0001768,3.98e-33,6;UBERON:0002200,3.98e-33,6;UBERON:0001801,2.64e-31,14;UBERON:0000970,3.66e-28,21;UBERON:0002104,3.66e-28,21;UBERON:0000020,1.37e-24,24;UBERON:0001032,1.37e-24,24;UBERON:0004456,1.37e-24,24;UBERON:0000019,7.32e-22,20;UBERON:0000047,7.32e-22,20;UBERON:0010312,7.32e-22,20;UBERON:0004088,7.32e-22,20;UBERON:0010230,7.32e-22,20;UBERON:0003072,7.32e-22,20;UBERON:0004128,7.32e-22,20;UBERON:0003071,7.32e-22,20;UBERON:0001456,7.44e-20,22;UBERON:0006876,2.99e-18,11;UBERON:0005085,5.13e-14,31;UBERON:0003075,1.07e-13,82;UBERON:0007284,1.07e-13,82;UBERON:0002506,1.42e-13,1;UBERON:0001769,1.42e-13,1;UBERON:0010077,2.84e-13,4;UBERON:0005389,2.84e-13,4;UBERON:0000484,2.84e-13,4;UBERON:0002546,2.84e-13,4;UBERON:0000965,2.84e-13,4;UBERON:0001803,2.84e-13,4;UBERON:0003073,2.84e-13,4;UBERON:0005426,2.84e-13,4;UBERON:0002346,5.20e-13,86;UBERON:0003056,5.49e-12,61;UBERON:0010371,1.42e-10,104;UBERON:0002037,3.86e-09,6;UBERON:0006215,3.86e-09,6;UBERON:0001444,9.50e-09,49;UBERON:0004121,1.02e-08,171;UBERON:0000924,1.02e-08,171;UBERON:0006601,1.02e-08,171;UBERON:0010314,4.39e-08,132;UBERON:0006955,1.12e-07,2;UBERON:0004801,1.12e-07,2;UBERON:0000033,1.31e-07,56;UBERON:0002771,1.36e-07,2;UBERON:0000076,4.41e-07,8;UBERON:0000153,7.76e-07,62;UBERON:0007811,7.76e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,1.64249310087461,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,1.99556457716308,1.31752178539689,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,1.04337364477569,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,0.773288812777695,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,2.01546198283421,0.20453736500431,0,0,0,0.179021174675609,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,2.95162491386597,0.885741385813839,0.60298219312704,0,1.3269511191747,1.18219047581419,0.219385397153973,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.843992258112108,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0.835375596043643,0.134802265961354,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0.0882561266915003,1.35588444468319,0,0,0.0633107959558787,0,0,0,0,0.288180834308212,0.687219576995494,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,1.58634144372552,0.500763722825999,0,0.221858103073705,0.0620964029413835,0,0,0,0,0.235265819698172,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0.512483037175893,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,0.192687675289379,0,0.638535436228605,0.205116364240755,0.756215088665154,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.222462803784138,0,0.628462359664008,0,0,0,0,0.285906176706625,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,4.1622031772149,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,1.64249310087461,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,1.99556457716308,1.31752178539689,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,1.04337364477569,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,0.773288812777695,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,2.01546198283421,0.20453736500431,0,0,0,0.179021174675609,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,2.95162491386597,0.885741385813839,0.60298219312704,0,1.3269511191747,1.18219047581419,0.219385397153973,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.843992258112108,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0.835375596043643,0.134802265961354,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0.0882561266915003,1.35588444468319,0,0,0.0633107959558787,0,0,0,0,0.288180834308212,0.687219576995494,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,1.58634144372552,0.500763722825999,0,0.221858103073705,0.0620964029413835,0,0,0,0,0.235265819698172,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0.512483037175893,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,0.192687675289379,0,0.638535436228605,0.205116364240755,0.756215088665154,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.222462803784138,0,0.628462359664008,0,0,0,0,0.285906176706625,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,4.1622031772149,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr11:31816236..31816261,- | |short_description=p@chr11:31816236..31816261,- | ||
}} | }} |
Latest revision as of 21:29, 23 July 2015
Short description: | p@chr11:31816236..31816261, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:31816236..31816261, - |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.08e-37 | 3 |
ciliated epithelial cell | 1.08e-37 | 3 |
multi-ciliated epithelial cell | 1.08e-37 | 3 |
non-pigmented ciliary epithelial cell | 1.08e-37 | 3 |
pigment cell (sensu Vertebrata) | 1.42e-13 | 1 |
iris pigment epithelial cell | 1.42e-13 | 1 |
crystallin accumulating cell | 2.84e-13 | 4 |
vertebrate lens cell | 2.84e-13 | 4 |
lens epithelial cell | 2.84e-13 | 4 |
columnar/cuboidal epithelial cell | 2.02e-11 | 27 |
epithelial cell of cervix | 1.12e-07 | 2 |
neuronal stem cell | 3.90e-07 | 8 |
neurectodermal cell | 5.21e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 9.87e-08 | 2 |
carcinosarcoma | 9.87e-08 | 2 |