FFCP PHASE1:Hg19::chr11:326866..326890,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:326866..326890,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:326866..326890,- | |description=CAGE_peak_at_chr11:326866..326890,- | ||
|id=chr11:326866..326890,- | |id=chr11:326866..326890,- | ||
|ontology_enrichment_celltype=CL:0000094!1.77e-16!8;CL:0002393!2.65e-14!9;CL:0002397!2.65e-14!9;CL:0000081!1.26e-11!11;CL:0000775!2.02e-09!3;CL:0000875!3.26e-09!3;CL:0002396!3.26e-09!3;CL:0000738!5.17e-09!140;CL:0000766!1.33e-08!76;CL:0002057!1.53e-07!42;CL:0000842!1.85e-07!3;CL:0000037!3.11e-07!172;CL:0000566!3.11e-07!172;CL:0000988!4.84e-07!182;CL:0000860!7.65e-07!45;CL:0000771!7.94e-07!2 | |ontology_enrichment_celltype=CL:0000094!1.77e-16!8;CL:0002393!2.65e-14!9;CL:0002397!2.65e-14!9;CL:0000081!1.26e-11!11;CL:0000775!2.02e-09!3;CL:0000875!3.26e-09!3;CL:0002396!3.26e-09!3;CL:0000738!5.17e-09!140;CL:0000766!1.33e-08!76;CL:0002057!1.53e-07!42;CL:0000842!1.85e-07!3;CL:0000037!3.11e-07!172;CL:0000566!3.11e-07!172;CL:0000988!4.84e-07!182;CL:0000860!7.65e-07!45;CL:0000771!7.94e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000094;3.50e-42;8!CL:0000775;3.85e-41;3!CL:0000875;1.19e-39;3!CL:0002396;1.19e-39;3!CL:0000081;1.00e-30;11!CL:0000771;4.72e-28;2!CL:0002393;1.10e-09;6!CL:0002397;1.10e-09;6!CL:0000766;1.10e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.50e-42,8;CL:0000775,3.86e-41,3;CL:0000875,4.38e-40,3;CL:0002396,4.38e-40,3;CL:0002393,2.94e-36,9;CL:0002397,2.94e-36,9;CL:0000081,1.00e-30,11;CL:0000771,4.73e-28,2;CL:0000766,3.90e-17,72;CL:0000763,4.18e-11,108;CL:0000049,4.18e-11,108;CL:0000738,1.66e-10,136;CL:0002032,1.12e-08,161;CL:0000837,1.12e-08,161;CL:0000037,2.93e-08,168;CL:0000860,8.76e-08,42;CL:0002057,8.76e-08,42;CL:0000988,9.00e-08,177;CL:0000473,8.45e-07,48;CL:0000234,8.45e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-18!115;UBERON:0000178!1.94e-15!15;UBERON:0000179!1.94e-15!15;UBERON:0000463!1.94e-15!15;UBERON:0002193!2.90e-12!112;UBERON:0002390!6.56e-11!102;UBERON:0003061!6.56e-11!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.97e-14;1!UBERON:0005208;1.97e-14;1!UBERON:0004145;1.97e-14;1!UBERON:0005946;1.97e-14;1!UBERON:0005965;1.97e-14;1!UBERON:0002078;1.97e-14;1!UBERON:0000178;1.69e-08;15!UBERON:0000179;1.69e-08;15!UBERON:0000463;1.69e-08;15!UBERON:0002081;7.27e-08;2!UBERON:0002133;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.41e-14,1;UBERON:0005208,2.41e-14,1;UBERON:0005946,2.41e-14,1;UBERON:0005965,2.41e-14,1;UBERON:0002078,2.41e-14,1;UBERON:0000178,1.78e-08,15;UBERON:0000179,1.78e-08,15;UBERON:0000463,1.78e-08,15;UBERON:0002081,8.04e-08,2;UBERON:0002133,8.04e-08,2;UBERON:0010227,8.04e-08,2;UBERON:0002390,1.03e-07,98;UBERON:0003061,1.03e-07,98;UBERON:0002193,6.23e-07,108 | |||
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| ||
|short_description=p@chr11:326866..326890,- | |short_description=p@chr11:326866..326890,- | ||
}} | }} |
Latest revision as of 21:35, 23 July 2015
Short description: | p@chr11:326866..326890, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:326866..326890, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.50e-42 | 8 |
neutrophil | 3.86e-41 | 3 |
non-classical monocyte | 4.38e-40 | 3 |
CD14-low, CD16-positive monocyte | 4.38e-40 | 3 |
intermediate monocyte | 2.94e-36 | 9 |
CD14-positive, CD16-positive monocyte | 2.94e-36 | 9 |
blood cell | 1.00e-30 | 11 |
eosinophil | 4.73e-28 | 2 |
myeloid leukocyte | 3.90e-17 | 72 |
myeloid cell | 4.18e-11 | 108 |
common myeloid progenitor | 4.18e-11 | 108 |
leukocyte | 1.66e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.12e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-08 | 161 |
hematopoietic stem cell | 2.93e-08 | 168 |
classical monocyte | 8.76e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.76e-08 | 42 |
hematopoietic cell | 9.00e-08 | 177 |
defensive cell | 8.45e-07 | 48 |
phagocyte | 8.45e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.41e-14 | 1 |
right atrium valve | 2.41e-14 | 1 |
outflow tract of atrium | 2.41e-14 | 1 |
outflow part of right atrium | 2.41e-14 | 1 |
right cardiac atrium | 2.41e-14 | 1 |
blood | 1.78e-08 | 15 |
haemolymphatic fluid | 1.78e-08 | 15 |
organism substance | 1.78e-08 | 15 |
cardiac atrium | 8.04e-08 | 2 |
atrioventricular valve | 8.04e-08 | 2 |
future cardiac atrium | 8.04e-08 | 2 |
hematopoietic system | 1.03e-07 | 98 |
blood island | 1.03e-07 | 98 |
hemolymphoid system | 6.23e-07 | 108 |