FFCP PHASE1:Hg19::chr16:19730065..19730073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:19730065..19730073,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr16:19730065..19730073,- | |description=CAGE_peak_at_chr16:19730065..19730073,- | ||
|id=chr16:19730065..19730073,- | |id=chr16:19730065..19730073,- | ||
|ontology_enrichment_celltype=CL:0005020!9.71e-17!6;CL:0002138!9.71e-17!6;CL:0005022!9.71e-17!6;CL:0002139!2.88e-07!24 | |ontology_enrichment_celltype=CL:0005020!9.71e-17!6;CL:0002138!9.71e-17!6;CL:0005022!9.71e-17!6;CL:0002139!2.88e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.19e-12;6!CL:0002138;2.59e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0005020,2.74e-12,6;CL:0002138,2.74e-12,6;CL:0005022,2.74e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9 | |||
|ontology_enrichment_development_v019=CL:0005022;2.59e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001473!1.83e-12!8;UBERON:0004536!1.83e-12!8;UBERON:0006558!1.83e-12!8;UBERON:0001893!4.21e-12!34;UBERON:0001049!5.14e-12!57;UBERON:0005068!5.14e-12!57;UBERON:0006241!5.14e-12!57;UBERON:0007135!5.14e-12!57;UBERON:0002616!1.70e-11!59;UBERON:0002771!2.39e-11!3;UBERON:0001869!6.72e-11!32;UBERON:0000955!1.56e-10!69;UBERON:0006238!1.56e-10!69;UBERON:0002791!1.95e-10!33;UBERON:0002020!3.80e-10!34;UBERON:0003528!3.80e-10!34;UBERON:0002465!6.82e-10!10;UBERON:0000200!8.97e-10!6;UBERON:0002780!1.13e-09!41;UBERON:0001890!1.13e-09!41;UBERON:0006240!1.13e-09!41;UBERON:0001017!1.46e-09!82;UBERON:0000956!1.55e-09!25;UBERON:0000203!1.55e-09!25;UBERON:0003080!2.16e-09!42;UBERON:0005743!6.04e-09!86;UBERON:0002619!1.44e-08!22;UBERON:0004111!4.57e-08!241;UBERON:0003075!7.20e-08!86;UBERON:0007284!7.20e-08!86;UBERON:0000073!9.44e-08!94;UBERON:0001016!9.44e-08!94;UBERON:0002346!2.30e-07!90;UBERON:0001950!2.72e-07!20;UBERON:0000025!3.32e-07!194;UBERON:0000477!6.50e-07!286;UBERON:0003056!7.04e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0001473;1.41e-09;8!UBERON:0004536;1.41e-09;8!UBERON:0006558;1.41e-09;8!UBERON:0002465;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0001473,1.47e-09,8;UBERON:0004536,1.47e-09,8;UBERON:0006558,1.47e-09,8;UBERON:0002465,6.56e-08,10 | |||
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| ||
|short_description=p@chr16:19730065..19730073,- | |short_description=p@chr16:19730065..19730073,- | ||
}} | }} |
Latest revision as of 06:51, 25 July 2015
Short description: | p@chr16:19730065..19730073, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:19730065..19730073, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
lymphangioblast | 2.74e-12 | 6 |
endothelial cell of lymphatic vessel | 2.74e-12 | 6 |
vascular lymphangioblast | 2.74e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
lymphatic vessel | 1.47e-09 | 8 |
lymph vasculature | 1.47e-09 | 8 |
lymphatic part of lymphoid system | 1.47e-09 | 8 |
lymphoid system | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |