FFCP PHASE1:Hg19::chr11:61129533..61129544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220002 | |EntrezGene=220002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23014 | |HGNC=23014 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000537074_5end | |association_with_transcript=8bp_to_ENST00000537074_5end | ||
|cluster_id=chr11:61129533..61129544,- | |||
|description=CAGE_peak_10_at_CYBASC3_5end | |description=CAGE_peak_10_at_CYBASC3_5end | ||
|id=chr11:61129533..61129544,- | |id=chr11:61129533..61129544,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.30e-22;3!CL:0002166;4.99e-22;3!CL:0000235;3.97e-20;6!CL:0000317;4.94e-15;2!CL:1000448;4.94e-15;2!CL:0002308;4.94e-15;2!CL:0002140;4.94e-15;2!CL:0002077;5.95e-14;34!CL:0002159;1.57e-12;14!CL:0000148;8.03e-12;10!CL:0002621;2.49e-10;3!CL:0000147;1.76e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.69e-22,3;CL:0002166,2.10e-22,3;CL:0000235,3.98e-20,6;CL:0002077,9.56e-16,34;CL:0000317,3.72e-15,2;CL:1000448,3.72e-15,2;CL:0002308,3.72e-15,2;CL:0002140,3.72e-15,2;CL:0002159,1.06e-12,14;CL:0000148,8.63e-12,10;CL:0000541,8.63e-12,10;CL:0002621,2.16e-10,3;CL:0000147,1.85e-08,14;CL:0000221,5.31e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.12e-16;4!UBERON:0008895;1.12e-16;4!UBERON:0002419;4.94e-15;2!UBERON:0007771;4.94e-15;2!UBERON:0003297;4.94e-15;2!UBERON:0001821;4.94e-15;2!UBERON:0003487;4.94e-15;2!UBERON:0001820;4.94e-15;2!UBERON:0011159;1.86e-13;5!UBERON:0001949;2.49e-10;3!UBERON:0001282;5.80e-09;1!UBERON:0009842;5.80e-09;1!UBERON:0003704;5.80e-09;1!UBERON:0001171;5.80e-09;1!UBERON:0001172;5.80e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,5.88e-17,4;UBERON:0008895,5.88e-17,4;UBERON:0002419,3.72e-15,2;UBERON:0007771,3.72e-15,2;UBERON:0003297,3.72e-15,2;UBERON:0001821,3.72e-15,2;UBERON:0003487,3.72e-15,2;UBERON:0001820,3.72e-15,2;UBERON:0005089,3.72e-15,2;UBERON:0005088,3.72e-15,2;UBERON:0011159,1.12e-13,5;UBERON:0010188,1.74e-11,6;UBERON:0002539,1.74e-11,6;UBERON:0008816,1.74e-11,6;UBERON:0001949,2.16e-10,3;UBERON:0001282,6.03e-09,1;UBERON:0009842,6.03e-09,1;UBERON:0003704,6.03e-09,1;UBERON:0001171,6.03e-09,1;UBERON:0001172,6.03e-09,1 | |||
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| |phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,1.29557466407592,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,1.35426486594342,0,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0.632924774881769,0.211255286311942,0.425208599930087,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0,0.728590576585084,0,0.97364218096405,0.696518949197069,0,0.953962497221368,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.794455084879313,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0.741800787835671,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,1.15956511897978,1.90922284413584,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.330881918197182,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,2.34004265139238,0.743155811443641,1.87467667973554,2.68771405118175,1.55952606966625,0,0,0,0.492663237895943,0,0,0,0,0.63497894292169,2.29193055334967,1.17217447210047,5.13217338068116,0.411309970813294,1.50171528921959,0.571652865261156,0,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,1.20575750823834,0.871533458600294,0.099972991182057,4.86495122564762,3.51579964002488,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0.355123450626254,0.0821271560138091,1.55776328755086,0.232420756919918,0,2.00506470303285,0,0,0,0.655622074797121,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,0.192190067365106,0.127612712494584,0.30347334256665,0,0.31481234683064,0.6970372701606,0,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0.421258456238981,0,0.731140468893853,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0.48111056362756,0,1.08890984861323,0.188287601553558,0.86101074534246,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,5.01345045726805,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0.494255755786011,0.313265848516366,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0.542999601753713,0.864221491201268,0,0,0.082092520749339,0.340776043570843,0.113312091520126,0.439656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.378806010550178,0,0,0.457680136793847,0.604923695052956,0.310874401165561,1.03498604992744,0.477890301491107,0.449803112163605,0.621051827505038,0.414706207840855,0.53168342911599,2.08698024724694,0,0,0,2.72772988803839,0,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0.584580926518165,0.398594520940089,0.817826971279221,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.687034029507179,0,0.183428598521679,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0.111855431797792,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.23152247432383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| ||
|short_description=p10@CYBASC3 | |short_description=p10@CYBASC3 | ||
}} | }} |
Latest revision as of 15:52, 18 September 2015
Short description: | p10@CYBASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CYBASC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000537074_5end |
EntrezGene: | CYBASC3 |
HGNC: | 23014 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.69e-22 | 3 |
epithelial cell of Malassez | 2.10e-22 | 3 |
macrophage | 3.98e-20 | 6 |
ecto-epithelial cell | 9.56e-16 | 34 |
sebum secreting cell | 3.72e-15 | 2 |
epithelial cell of sweat gland | 3.72e-15 | 2 |
epithelial cell of skin gland | 3.72e-15 | 2 |
acinar cell of sebaceous gland | 3.72e-15 | 2 |
general ecto-epithelial cell | 1.06e-12 | 14 |
melanocyte | 8.63e-12 | 10 |
melanoblast | 8.63e-12 | 10 |
gingival epithelial cell | 2.16e-10 | 3 |
pigment cell | 1.85e-08 | 14 |
ectodermal cell | 5.31e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 5.88e-17 | 4 |
splanchnocranium | 5.88e-17 | 4 |
skin gland | 3.72e-15 | 2 |
epidermis gland | 3.72e-15 | 2 |
gland of integumental system | 3.72e-15 | 2 |
sebaceous gland | 3.72e-15 | 2 |
skin sebaceous gland | 3.72e-15 | 2 |
sweat gland | 3.72e-15 | 2 |
sweat gland placode | 3.72e-15 | 2 |
sebaceous gland placode | 3.72e-15 | 2 |
primary subdivision of cranial skeletal system | 1.12e-13 | 5 |
protuberance | 1.74e-11 | 6 |
pharyngeal arch | 1.74e-11 | 6 |
embryonic head | 1.74e-11 | 6 |
gingival epithelium | 2.16e-10 | 3 |
intralobular bile duct | 6.03e-09 | 1 |
acinus | 6.03e-09 | 1 |
intrahepatic bile duct | 6.03e-09 | 1 |
portal lobule | 6.03e-09 | 1 |
hepatic acinus | 6.03e-09 | 1 |