FFCP PHASE1:Hg19::chr11:65650281..65650292,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65650281..65650292,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr11:65650281..65650292,+ | |description=CAGE_peak_at_chr11:65650281..65650292,+ | ||
|id=chr11:65650281..65650292,+ | |id=chr11:65650281..65650292,+ | ||
|ontology_enrichment_celltype=CL:0000037!6.61e-17!172;CL:0000566!6.61e-17!172;CL:0000791!1.79e-15!18;CL:0000789!1.79e-15!18;CL:0002420!1.79e-15!18;CL:0002419!1.79e-15!18;CL:0000790!1.79e-15!18;CL:0000988!1.94e-15!182;CL:0000625!1.84e-13!11;CL:0002032!1.89e-13!165;CL:0000837!1.89e-13!165;CL:0000623!7.73e-11!3;CL:0000825!7.73e-11!3;CL:0000084!1.56e-10!25;CL:0000827!1.56e-10!25;CL:0000842!3.16e-10!3;CL:0000767!9.14e-10!3;CL:0000738!6.49e-09!140;CL:0000838!1.55e-08!52;CL:0000542!2.58e-08!53;CL:0000051!2.58e-08!53;CL:0000224!9.34e-08!4 | |ontology_enrichment_celltype=CL:0000037!6.61e-17!172;CL:0000566!6.61e-17!172;CL:0000791!1.79e-15!18;CL:0000789!1.79e-15!18;CL:0002420!1.79e-15!18;CL:0002419!1.79e-15!18;CL:0000790!1.79e-15!18;CL:0000988!1.94e-15!182;CL:0000625!1.84e-13!11;CL:0002032!1.89e-13!165;CL:0000837!1.89e-13!165;CL:0000623!7.73e-11!3;CL:0000825!7.73e-11!3;CL:0000084!1.56e-10!25;CL:0000827!1.56e-10!25;CL:0000842!3.16e-10!3;CL:0000767!9.14e-10!3;CL:0000738!6.49e-09!140;CL:0000838!1.55e-08!52;CL:0000542!2.58e-08!53;CL:0000051!2.58e-08!53;CL:0000224!9.34e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.11e-46;3!CL:0000625;1.34e-22;11!CL:0000226;4.02e-21;3!CL:0000842;4.02e-21;3!CL:0000791;5.88e-14;18!CL:0000789;5.88e-14;18!CL:0002419;5.88e-14;18!CL:0000084;3.92e-10;25!CL:0000542;1.84e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.41e-46,3;CL:0000825,1.41e-46,3;CL:0000625,1.98e-22,11;CL:0000226,3.28e-21,3;CL:0000842,3.28e-21,3;CL:0000838,5.61e-14,52;CL:0000791,7.44e-14,18;CL:0000789,7.44e-14,18;CL:0002420,7.44e-14,18;CL:0002419,7.44e-14,18;CL:0000790,7.44e-14,18;CL:0000542,1.05e-13,53;CL:0000051,1.05e-13,53;CL:0000084,4.63e-10,25;CL:0000827,4.63e-10,25;CL:0000037,6.72e-10,168;CL:0002087,7.24e-10,115;CL:0000988,2.42e-09,177;CL:0000738,3.21e-08,136;CL:0002032,8.17e-07,161;CL:0000837,8.17e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;5.88e-14;18!CL:0000051;1.84e-08;53 | |||
|ontology_enrichment_disease=DOID:8692!1.80e-09!31;DOID:1240!2.07e-08!39 | |ontology_enrichment_disease=DOID:8692!1.80e-09!31;DOID:1240!2.07e-08!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.78e-16;1!UBERON:0000178;8.92e-10;15!UBERON:0000179;8.92e-10;15!UBERON:0000463;8.92e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.21e-16,1;UBERON:0000178,8.15e-10,15;UBERON:0000179,8.15e-10,15;UBERON:0000463,8.15e-10,15 | |||
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| ||
|short_description=p@chr11:65650281..65650292,+ | |short_description=p@chr11:65650281..65650292,+ | ||
}} | }} |
Latest revision as of 00:51, 24 July 2015
Short description: | p@chr11:65650281..65650292, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65650281..65650292, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.41e-46 | 3 |
pro-NK cell | 1.41e-46 | 3 |
CD8-positive, alpha-beta T cell | 1.98e-22 | 11 |
single nucleate cell | 3.28e-21 | 3 |
mononuclear cell | 3.28e-21 | 3 |
lymphoid lineage restricted progenitor cell | 5.61e-14 | 52 |
mature alpha-beta T cell | 7.44e-14 | 18 |
alpha-beta T cell | 7.44e-14 | 18 |
immature T cell | 7.44e-14 | 18 |
mature T cell | 7.44e-14 | 18 |
immature alpha-beta T cell | 7.44e-14 | 18 |
lymphocyte | 1.05e-13 | 53 |
common lymphoid progenitor | 1.05e-13 | 53 |
T cell | 4.63e-10 | 25 |
pro-T cell | 4.63e-10 | 25 |
hematopoietic stem cell | 6.72e-10 | 168 |
nongranular leukocyte | 7.24e-10 | 115 |
hematopoietic cell | 2.42e-09 | 177 |
leukocyte | 3.21e-08 | 136 |
hematopoietic oligopotent progenitor cell | 8.17e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.17e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.21e-16 | 1 |
blood | 8.15e-10 | 15 |
haemolymphatic fluid | 8.15e-10 | 15 |
organism substance | 8.15e-10 | 15 |