FFCP PHASE1:Hg19::chr11:66486268..66486281,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q45KQ1 | |UniProt=Q45KQ1 | ||
|association_with_transcript=-86bp_to_DQ126686_5end | |association_with_transcript=-86bp_to_DQ126686_5end | ||
|cluster_id=chr11:66486268..66486281,- | |||
|description=CAGE_peak_2_at_DQ126686_5end | |description=CAGE_peak_2_at_DQ126686_5end | ||
|id=chr11:66486268..66486281,- | |id=chr11:66486268..66486281,- | ||
|ontology_enrichment_celltype=CL:0002076!4.01e-19!43;CL:0000223!8.25e-18!59;CL:0000066!1.72e-16!254;CL:0002368!3.54e-13!13;CL:0002202!1.15e-08!9;CL:0002632!1.15e-08!9;CL:0002251!1.23e-07!21 | |ontology_enrichment_celltype=CL:0002076!4.01e-19!43;CL:0000223!8.25e-18!59;CL:0000066!1.72e-16!254;CL:0002368!3.54e-13!13;CL:0002202!1.15e-08!9;CL:0002632!1.15e-08!9;CL:0002251!1.23e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002577;9.68e-13;3!CL:0000349;2.60e-12;19!CL:0000575;2.32e-09;2!CL:0002536;5.92e-09;2!CL:0002537;7.07e-08;5!CL:0002202;5.07e-07;9!CL:0002632;5.07e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,7.93e-13,3;CL:0000349,2.12e-12,19;CL:0000575,2.43e-09,2;CL:0002076,4.76e-09,42;CL:0002536,6.17e-09,2;CL:0002537,5.72e-08,5;CL:0000223,3.77e-07,58;CL:0002202,5.16e-07,9;CL:0002632,5.16e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.02e-07!4;DOID:1612!1.02e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.17e-14!169;UBERON:0000925!2.17e-14!169;UBERON:0006595!2.17e-14!169;UBERON:0001004!4.50e-13!72;UBERON:0001444!1.45e-11!48;UBERON:0005631!1.58e-11!14;UBERON:0000158!1.58e-11!14;UBERON:0000077!5.46e-11!130;UBERON:0000166!3.15e-10!21;UBERON:0000161!3.27e-10!35;UBERON:0001007!7.54e-10!155;UBERON:0001555!7.54e-10!155;UBERON:0007026!7.54e-10!155;UBERON:0000466!5.27e-09!126;UBERON:0007196!9.56e-09!14;UBERON:0001558!9.56e-09!14;UBERON:0000464!2.01e-08!104;UBERON:0001041!4.03e-08!98;UBERON:0000165!4.40e-08!28;UBERON:0000930!4.40e-08!28;UBERON:0004921!4.51e-08!129;UBERON:0004185!4.51e-08!129;UBERON:0000020!5.34e-08!23;UBERON:0000062!6.97e-08!511;UBERON:0000475!7.32e-08!365;UBERON:0000065!1.28e-07!53;UBERON:0001032!1.51e-07!24;UBERON:0004456!1.51e-07!24;UBERON:0001987!1.59e-07!4;UBERON:0004340!1.59e-07!4;UBERON:0000468!1.64e-07!659;UBERON:0000915!2.25e-07!52;UBERON:0004175!2.33e-07!25;UBERON:0009569!3.69e-07!113;UBERON:0000478!4.75e-07!24;UBERON:0005177!5.01e-07!107;UBERON:0005178!6.15e-07!34;UBERON:0002224!6.15e-07!34;UBERON:0000305!6.88e-07!7;UBERON:0000064!8.79e-07!219 | |ontology_enrichment_uberon=UBERON:0004119!2.17e-14!169;UBERON:0000925!2.17e-14!169;UBERON:0006595!2.17e-14!169;UBERON:0001004!4.50e-13!72;UBERON:0001444!1.45e-11!48;UBERON:0005631!1.58e-11!14;UBERON:0000158!1.58e-11!14;UBERON:0000077!5.46e-11!130;UBERON:0000166!3.15e-10!21;UBERON:0000161!3.27e-10!35;UBERON:0001007!7.54e-10!155;UBERON:0001555!7.54e-10!155;UBERON:0007026!7.54e-10!155;UBERON:0000466!5.27e-09!126;UBERON:0007196!9.56e-09!14;UBERON:0001558!9.56e-09!14;UBERON:0000464!2.01e-08!104;UBERON:0001041!4.03e-08!98;UBERON:0000165!4.40e-08!28;UBERON:0000930!4.40e-08!28;UBERON:0004921!4.51e-08!129;UBERON:0004185!4.51e-08!129;UBERON:0000020!5.34e-08!23;UBERON:0000062!6.97e-08!511;UBERON:0000475!7.32e-08!365;UBERON:0000065!1.28e-07!53;UBERON:0001032!1.51e-07!24;UBERON:0004456!1.51e-07!24;UBERON:0001987!1.59e-07!4;UBERON:0004340!1.59e-07!4;UBERON:0000468!1.64e-07!659;UBERON:0000915!2.25e-07!52;UBERON:0004175!2.33e-07!25;UBERON:0009569!3.69e-07!113;UBERON:0000478!4.75e-07!24;UBERON:0005177!5.01e-07!107;UBERON:0005178!6.15e-07!34;UBERON:0002224!6.15e-07!34;UBERON:0000305!6.88e-07!7;UBERON:0000064!8.79e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.92e-14;7!UBERON:0000478;5.72e-12;24!UBERON:0001044;8.13e-11;6!UBERON:0003293;8.13e-11;6!UBERON:0003294;8.13e-11;6!UBERON:0010047;8.13e-11;6!UBERON:0003408;8.13e-11;6!UBERON:0000167;8.13e-11;6!UBERON:0000165;3.86e-10;28!UBERON:0001041;6.79e-10;14!UBERON:0005631;6.79e-10;10!UBERON:0000158;6.79e-10;10!UBERON:0001987;1.14e-09;4!UBERON:0006562;1.60e-09;2!UBERON:0000161;2.19e-09;19!UBERON:0000166;2.19e-09;19!UBERON:0003127;5.92e-09;2!UBERON:0001829;7.53e-09;2!UBERON:0007196;8.41e-09;15!UBERON:0001558;8.41e-09;15!UBERON:0004921;3.51e-07;33!UBERON:0005178;4.84e-07;34!UBERON:0002224;4.84e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.62e-17,14;UBERON:0000158,2.62e-17,14;UBERON:0000305,2.33e-14,7;UBERON:0000166,2.55e-13,22;UBERON:0004871,1.58e-12,8;UBERON:0000478,4.71e-12,24;UBERON:0001044,7.63e-11,6;UBERON:0003293,7.63e-11,6;UBERON:0003294,7.63e-11,6;UBERON:0010047,7.63e-11,6;UBERON:0000167,7.63e-11,6;UBERON:0001004,5.07e-10,74;UBERON:0001987,9.87e-10,4;UBERON:0004340,9.87e-10,4;UBERON:0000165,1.05e-09,29;UBERON:0000930,1.05e-09,29;UBERON:0001041,2.42e-09,87;UBERON:0003127,4.66e-09,2;UBERON:0001829,6.17e-09,2;UBERON:0007196,7.82e-09,15;UBERON:0001558,7.82e-09,15;UBERON:0004119,1.42e-08,160;UBERON:0000925,1.42e-08,160;UBERON:0006595,1.42e-08,160;UBERON:0005795,5.82e-08,22;UBERON:0005178,6.67e-08,34;UBERON:0002224,6.67e-08,34;UBERON:0001444,8.62e-08,49;UBERON:0005181,1.24e-07,35;UBERON:0000161,1.65e-07,36;UBERON:0000915,3.82e-07,52;UBERON:0000153,6.14e-07,62;UBERON:0007811,6.14e-07,62;UBERON:0004175,9.36e-07,25;UBERON:0004921,9.77e-07,118 | |||
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| ||
|short_description=p2@DQ126686 | |short_description=p2@DQ126686 | ||
}} | }} |
Latest revision as of 15:34, 19 September 2015
Short description: | p2@DQ126686 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DQ126686_5end |
Coexpression cluster: | NA |
Association with transcript: | -86bp_to_DQ126686_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.93e-13 | 3 |
extraembryonic cell | 2.12e-12 | 19 |
corneal epithelial cell | 2.43e-09 | 2 |
endo-epithelial cell | 4.76e-09 | 42 |
amniotic epithelial cell | 6.17e-09 | 2 |
amnion mesenchymal stem cell | 5.72e-08 | 5 |
endodermal cell | 3.77e-07 | 58 |
epithelial cell of tracheobronchial tree | 5.16e-07 | 9 |
epithelial cell of lower respiratory tract | 5.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.62e-17 | 14 |
membranous layer | 2.62e-17 | 14 |
amnion | 2.33e-14 | 7 |
oral opening | 2.55e-13 | 22 |
somatic layer of lateral plate mesoderm | 1.58e-12 | 8 |
extraembryonic structure | 4.71e-12 | 24 |
saliva-secreting gland | 7.63e-11 | 6 |
gland of oral region | 7.63e-11 | 6 |
gland of foregut | 7.63e-11 | 6 |
oral gland | 7.63e-11 | 6 |
oral cavity | 7.63e-11 | 6 |
respiratory system | 5.07e-10 | 74 |
placenta | 9.87e-10 | 4 |
allantois | 9.87e-10 | 4 |
mouth | 1.05e-09 | 29 |
stomodeum | 1.05e-09 | 29 |
foregut | 2.42e-09 | 87 |
open tracheal system trachea | 4.66e-09 | 2 |
major salivary gland | 6.17e-09 | 2 |
tracheobronchial tree | 7.82e-09 | 15 |
lower respiratory tract | 7.82e-09 | 15 |
endoderm-derived structure | 1.42e-08 | 160 |
endoderm | 1.42e-08 | 160 |
presumptive endoderm | 1.42e-08 | 160 |
embryonic uterus | 5.82e-08 | 22 |
thoracic cavity element | 6.67e-08 | 34 |
thoracic cavity | 6.67e-08 | 34 |
subdivision of head | 8.62e-08 | 49 |
thoracic segment organ | 1.24e-07 | 35 |
orifice | 1.65e-07 | 36 |
thoracic segment of trunk | 3.82e-07 | 52 |
anterior region of body | 6.14e-07 | 62 |
craniocervical region | 6.14e-07 | 62 |
internal genitalia | 9.36e-07 | 25 |
subdivision of digestive tract | 9.77e-07 | 118 |