FFCP PHASE1:Hg19::chr10:51827705..51827720,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:51827705..51827720,+
|short_description=p1@FAM21A
|description=CAGE_peak_1_at_FAM21A_5end
|association_with_transcript=0bp_to_ENST00000282633_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=387680 | |EntrezGene=387680 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23416 | |HGNC=23416 | ||
|TSSclassifier=strong | |||
|UniProt=Q641Q2 | |UniProt=Q641Q2 | ||
|association_with_transcript=0bp_to_ENST00000282633_5end | |||
|cluster_id=chr10:51827705..51827720,+ | |||
|description=CAGE_peak_1_at_FAM21A_5end | |||
|id=chr10:51827705..51827720,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.44e-24!42;CL:0000766!2.59e-22!76;CL:0000860!6.86e-22!45;CL:0000557!2.42e-21!71;CL:0002009!4.26e-21!65;CL:0000839!2.03e-20!70;CL:0002194!3.50e-20!63;CL:0000576!3.50e-20!63;CL:0000040!3.50e-20!63;CL:0000559!3.50e-20!63;CL:0000738!4.09e-20!140;CL:0000763!1.99e-17!112;CL:0000049!1.99e-17!112;CL:0002031!1.38e-16!124;CL:0000037!4.84e-16!172;CL:0000566!4.84e-16!172;CL:0002087!1.43e-15!119;CL:0002032!3.97e-15!165;CL:0000837!3.97e-15!165;CL:0000988!6.13e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.30e-19;33!CL:0002057;7.30e-19;33!CL:0000473;3.31e-16;39!CL:0000234;3.31e-16;39!CL:0000576;6.00e-15;48!CL:0000766;2.18e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.10e-25,48;CL:0000234,5.10e-25,48;CL:0000766,9.57e-25,72;CL:0000860,2.44e-24,42;CL:0002057,2.44e-24,42;CL:0000557,8.00e-24,67;CL:0002009,9.89e-24,61;CL:0000839,7.65e-23,66;CL:0002194,8.59e-23,59;CL:0000576,8.59e-23,59;CL:0000040,8.59e-23,59;CL:0000559,8.59e-23,59;CL:0000738,1.49e-21,136;CL:0000763,6.00e-19,108;CL:0000049,6.00e-19,108;CL:0002031,5.95e-18,120;CL:0000037,4.10e-17,168;CL:0002087,6.47e-17,115;CL:0002032,3.47e-16,161;CL:0000837,3.47e-16,161;CL:0000988,3.73e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.67e-19!80;UBERON:0001474!2.21e-18!86;UBERON:0004765!1.95e-17!101;UBERON:0001434!1.95e-17!101;UBERON:0002193!4.92e-17!112;UBERON:0002390!6.61e-17!102;UBERON:0003061!6.61e-17!102;UBERON:0002405!6.94e-13!115;UBERON:0002204!2.75e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.91e-21,76;UBERON:0002405,5.87e-21,93;UBERON:0001474,2.69e-20,82;UBERON:0002193,1.57e-18,108;UBERON:0002390,1.70e-18,98;UBERON:0003061,1.70e-18,98;UBERON:0001434,3.01e-18,100;UBERON:0004765,3.85e-18,90;UBERON:0002204,5.19e-10,167;UBERON:0003081,8.80e-07,203 | |||
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| ||
|short_description=p1@FAM21A | |||
}} | }} |
Latest revision as of 10:49, 18 September 2015
Short description: | p1@FAM21A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM21A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000282633_5end |
EntrezGene: | FAM21A |
HGNC: | 23416 |
UniProt: | Q641Q2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.10e-25 | 48 |
phagocyte | 5.10e-25 | 48 |
myeloid leukocyte | 9.57e-25 | 72 |
classical monocyte | 2.44e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.44e-24 | 42 |
granulocyte monocyte progenitor cell | 8.00e-24 | 67 |
macrophage dendritic cell progenitor | 9.89e-24 | 61 |
myeloid lineage restricted progenitor cell | 7.65e-23 | 66 |
monopoietic cell | 8.59e-23 | 59 |
monocyte | 8.59e-23 | 59 |
monoblast | 8.59e-23 | 59 |
promonocyte | 8.59e-23 | 59 |
leukocyte | 1.49e-21 | 136 |
myeloid cell | 6.00e-19 | 108 |
common myeloid progenitor | 6.00e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 5.95e-18 | 120 |
hematopoietic stem cell | 4.10e-17 | 168 |
nongranular leukocyte | 6.47e-17 | 115 |
hematopoietic oligopotent progenitor cell | 3.47e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.47e-16 | 161 |
hematopoietic cell | 3.73e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.91e-21 | 76 |
immune system | 5.87e-21 | 93 |
bone element | 2.69e-20 | 82 |
hemolymphoid system | 1.57e-18 | 108 |
hematopoietic system | 1.70e-18 | 98 |
blood island | 1.70e-18 | 98 |
skeletal system | 3.01e-18 | 100 |
skeletal element | 3.85e-18 | 90 |
musculoskeletal system | 5.19e-10 | 167 |
lateral plate mesoderm | 8.80e-07 | 203 |