FFCP PHASE1:Hg19::chr17:33391053..33391078,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117584 | |EntrezGene=117584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24821 | |HGNC=24821 | ||
|TSSclassifier=strong | |||
|UniProt=C9JN73 | |UniProt=C9JN73 | ||
|association_with_transcript=-182bp_to_ENST00000413582_5end | |association_with_transcript=-182bp_to_ENST00000413582_5end | ||
|cluster_id=chr17:33391053..33391078,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_RFFL_5end | |description=CAGE_peak_9_at_RFFL_5end | ||
|id=chr17:33391053..33391078,- | |id=chr17:33391053..33391078,- | ||
|ontology_enrichment_celltype=CL:0002057!1.95e-37!42;CL:0000860!2.07e-34!45;CL:0002031!7.27e-28!124;CL:0002087!3.87e-26!119;CL:0000738!6.88e-26!140;CL:0000839!2.29e-24!70;CL:0002194!6.94e-22!63;CL:0000576!6.94e-22!63;CL:0000040!6.94e-22!63;CL:0000559!6.94e-22!63;CL:0000766!1.22e-21!76;CL:0002032!1.58e-21!165;CL:0000837!1.58e-21!165;CL:0000037!2.95e-21!172;CL:0000566!2.95e-21!172;CL:0002009!5.43e-21!65;CL:0000557!3.25e-20!71;CL:0000988!2.09e-19!182;CL:0000763!1.25e-15!112;CL:0000049!1.25e-15!112;CL:0000945!1.19e-10!24;CL:0000826!1.19e-10!24 | |ontology_enrichment_celltype=CL:0002057!1.95e-37!42;CL:0000860!2.07e-34!45;CL:0002031!7.27e-28!124;CL:0002087!3.87e-26!119;CL:0000738!6.88e-26!140;CL:0000839!2.29e-24!70;CL:0002194!6.94e-22!63;CL:0000576!6.94e-22!63;CL:0000040!6.94e-22!63;CL:0000559!6.94e-22!63;CL:0000766!1.22e-21!76;CL:0002032!1.58e-21!165;CL:0000837!1.58e-21!165;CL:0000037!2.95e-21!172;CL:0000566!2.95e-21!172;CL:0002009!5.43e-21!65;CL:0000557!3.25e-20!71;CL:0000988!2.09e-19!182;CL:0000763!1.25e-15!112;CL:0000049!1.25e-15!112;CL:0000945!1.19e-10!24;CL:0000826!1.19e-10!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.46e-52;33!CL:0002057;4.46e-52;33!CL:0000473;4.82e-37;39!CL:0000234;4.82e-37;39!CL:0000576;1.69e-21;48!CL:0000766;6.24e-15;69!CL:0002087;5.23e-14;104!CL:0000763;2.83e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-44,42;CL:0002057,1.38e-44,42;CL:0000473,9.13e-39,48;CL:0000234,9.13e-39,48;CL:0002194,1.31e-30,59;CL:0000576,1.31e-30,59;CL:0000040,1.31e-30,59;CL:0000559,1.31e-30,59;CL:0002009,1.48e-29,61;CL:0000839,3.39e-27,66;CL:0000557,9.13e-27,67;CL:0000766,8.63e-25,72;CL:0002087,1.94e-22,115;CL:0002031,2.07e-21,120;CL:0000738,1.28e-18,136;CL:0000763,6.69e-16,108;CL:0000049,6.69e-16,108;CL:0002032,2.34e-15,161;CL:0000837,2.34e-15,161;CL:0000037,1.29e-14,168;CL:0000988,9.53e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-31;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;4.67e-11;1!DOID:0070004;4.67e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.91e-11,1;DOID:0070004,4.91e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-18!80;UBERON:0002405!3.11e-17!115;UBERON:0001474!7.32e-17!86;UBERON:0002390!1.39e-16!102;UBERON:0003061!1.39e-16!102;UBERON:0002193!1.53e-15!112;UBERON:0004765!3.05e-13!101;UBERON:0001434!3.05e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.87e-27,76;UBERON:0001474,7.53e-25,82;UBERON:0002405,7.80e-25,93;UBERON:0002390,1.84e-23,98;UBERON:0003061,1.84e-23,98;UBERON:0004765,1.81e-22,90;UBERON:0002193,4.29e-21,108;UBERON:0001434,5.06e-20,100;UBERON:0002204,4.12e-11,167;UBERON:0003081,3.97e-10,203 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.656804715599566,0.236132343941038,0,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,1.42169232487422,0,0.553995408531877,0.401088894940283,0,0,0,0,0.290796477559129,0.377875943688809,0,0.697287110717054,0,0.929119112685311,2.8769239232215,1.0246428261164,0.945928919554341,3.10271112662957,2.5819387343353,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,3.36692281607993,2.56743221660875,1.91801137739712,0,0,0,3.19230162491442,4.53908179752912,3.73693349397345,0.502497330513487,0,0.217188844705117,3.63239701580021,5.89244217580104,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,3.20020494198781,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.472834243795189,0.209818352539992,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76656284657122,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0.194860308839388,0,0,0,0.491545817507439,0,0,0.106691729694141,1.20550485762571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,2.29864658627337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p9@RFFL | |short_description=p9@RFFL | ||
}} | }} |
Latest revision as of 14:11, 19 September 2015
Short description: | p9@RFFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RFFL_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -182bp_to_ENST00000413582_5end |
EntrezGene: | RFFL |
HGNC: | 24821 |
UniProt: | C9JN73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-44 | 42 |
defensive cell | 9.13e-39 | 48 |
phagocyte | 9.13e-39 | 48 |
monopoietic cell | 1.31e-30 | 59 |
monocyte | 1.31e-30 | 59 |
monoblast | 1.31e-30 | 59 |
promonocyte | 1.31e-30 | 59 |
macrophage dendritic cell progenitor | 1.48e-29 | 61 |
myeloid lineage restricted progenitor cell | 3.39e-27 | 66 |
granulocyte monocyte progenitor cell | 9.13e-27 | 67 |
myeloid leukocyte | 8.63e-25 | 72 |
nongranular leukocyte | 1.94e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.07e-21 | 120 |
leukocyte | 1.28e-18 | 136 |
myeloid cell | 6.69e-16 | 108 |
common myeloid progenitor | 6.69e-16 | 108 |
hematopoietic oligopotent progenitor cell | 2.34e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-15 | 161 |
hematopoietic stem cell | 1.29e-14 | 168 |
hematopoietic cell | 9.53e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.87e-27 | 76 |
bone element | 7.53e-25 | 82 |
immune system | 7.80e-25 | 93 |
hematopoietic system | 1.84e-23 | 98 |
blood island | 1.84e-23 | 98 |
skeletal element | 1.81e-22 | 90 |
hemolymphoid system | 4.29e-21 | 108 |
skeletal system | 5.06e-20 | 100 |
musculoskeletal system | 4.12e-11 | 167 |
lateral plate mesoderm | 3.97e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.91e-11 | 1 |
myeloma | 4.91e-11 | 1 |