FFCP PHASE1:Hg19::chr17:35292551..35292558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:35292551..35292558,+ | |||
|description=CAGE_peak_at_chr17:35292551..35292558,+ | |description=CAGE_peak_at_chr17:35292551..35292558,+ | ||
|id=chr17:35292551..35292558,+ | |id=chr17:35292551..35292558,+ | ||
|ontology_enrichment_celltype=CL:1000507!2.23e-10!12;CL:1000494!2.23e-10!12;CL:1000449!1.34e-07!16 | |ontology_enrichment_celltype=CL:1000507!2.23e-10!12;CL:1000494!2.23e-10!12;CL:1000449!1.34e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000650;1.97e-10;2!CL:1000500;1.97e-10;2!CL:1000618;1.97e-10;2!CL:1001318;1.97e-10;2!CL:0002173;1.97e-10;2!CL:1000507;3.63e-08;10!CL:1000494;3.63e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,2.07e-10,2;CL:1000500,2.07e-10,2;CL:1000618,2.07e-10,2;CL:1001318,2.07e-10,2;CL:0002173,2.07e-10,2;CL:1000507,4.04e-08,10;CL:1000494,4.04e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.46e-08!235;DOID:14566!3.17e-08!239;DOID:0050687!6.64e-08!143;DOID:1115!1.63e-07!20;DOID:3093!4.85e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.43e-10;2!DOID:4929;1.64e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.43e-10,2;DOID:4929,1.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.72e-11!27;UBERON:0003918!2.72e-11!27;UBERON:0005095!2.72e-11!27;UBERON:0007687!2.72e-11!27;UBERON:0009773!2.23e-10!12;UBERON:0001231!2.23e-10!12;UBERON:0004810!2.23e-10!12;UBERON:0001264!2.68e-09!10;UBERON:0003922!2.68e-09!10;UBERON:0003923!2.68e-09!10;UBERON:0003924!2.68e-09!10;UBERON:0003921!2.68e-09!10;UBERON:0000489!3.27e-09!32;UBERON:0000080!6.47e-09!18;UBERON:0002120!6.47e-09!18;UBERON:0004875!6.47e-09!18;UBERON:0005721!6.47e-09!18;UBERON:0005754!6.47e-09!18;UBERON:0007297!6.47e-09!18;UBERON:0001045!2.05e-08!11;UBERON:0005177!2.37e-08!107;UBERON:0004876!6.43e-08!20;UBERON:0004211!1.34e-07!16;UBERON:0001285!1.34e-07!16;UBERON:0007684!1.34e-07!16;UBERON:0003220!1.34e-07!16;UBERON:0004208!1.34e-07!16;UBERON:0000058!1.48e-07!26;UBERON:0003887!1.72e-07!21;UBERON:0006555!4.13e-07!17;UBERON:0005103!4.13e-07!17;UBERON:0000083!4.13e-07!17;UBERON:0009201!4.13e-07!17;UBERON:0004819!4.13e-07!17;UBERON:0006553!4.13e-07!17;UBERON:0003074!4.13e-07!17;UBERON:0003060!4.13e-07!17;UBERON:0002114!4.70e-07!12;UBERON:0002553!6.56e-07!70;UBERON:0003886!7.86e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;3.93e-29;10!UBERON:0002075;2.16e-16;18!UBERON:0003567;1.97e-10;2!UBERON:0003838;1.97e-10;2!UBERON:0003586;1.97e-10;2!UBERON:0005169;1.97e-10;2!UBERON:0002321;1.97e-10;2!UBERON:0005215;1.97e-10;2!UBERON:0002303;1.97e-10;2!UBERON:0002319;1.97e-10;2!UBERON:0004211;3.63e-08;10!UBERON:0009773;3.63e-08;10!UBERON:0001231;3.63e-08;10!UBERON:0004810;3.63e-08;10!UBERON:0000949;6.37e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,3.16e-29,10;UBERON:0002075,1.91e-16,18;UBERON:0003567,2.07e-10,2;UBERON:0003838,2.07e-10,2;UBERON:0003586,2.07e-10,2;UBERON:0005169,2.07e-10,2;UBERON:0002321,2.07e-10,2;UBERON:0005215,2.07e-10,2;UBERON:0002303,2.07e-10,2;UBERON:0002319,2.07e-10,2;UBERON:0003886,1.80e-08,54;UBERON:0004810,4.04e-08,10;UBERON:0002553,1.69e-07,61;UBERON:0000949,9.20e-07,45 | |||
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| ||
|short_description=p@chr17:35292551..35292558,+ | |short_description=p@chr17:35292551..35292558,+ | ||
}} | }} |
Latest revision as of 15:48, 25 July 2015
Short description: | p@chr17:35292551..35292558, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:35292551..35292558, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 2.07e-10 | 2 |
kidney interstitial cell | 2.07e-10 | 2 |
juxtaglomerular complex cell | 2.07e-10 | 2 |
renal interstitial pericyte | 2.07e-10 | 2 |
extraglomerular mesangial cell | 2.07e-10 | 2 |
kidney tubule cell | 4.04e-08 | 10 |
nephron tubule epithelial cell | 4.04e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
pancreas | 3.16e-29 | 10 |
viscus | 1.91e-16 | 18 |
abdomen connective tissue | 2.07e-10 | 2 |
abdominal segment connective tissue | 2.07e-10 | 2 |
trunk connective tissue | 2.07e-10 | 2 |
interstitial tissue | 2.07e-10 | 2 |
extraglomerular mesangium | 2.07e-10 | 2 |
kidney interstitium | 2.07e-10 | 2 |
juxtaglomerular apparatus | 2.07e-10 | 2 |
mesangium | 2.07e-10 | 2 |
body cavity precursor | 1.80e-08 | 54 |
nephron tubule epithelium | 4.04e-08 | 10 |
anatomical cavity | 1.69e-07 | 61 |
endocrine system | 9.20e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.43e-10 | 2 |
tubular adenocarcinoma | 1.72e-10 | 2 |