FFCP PHASE1:Hg19::chr10:8091813..8091823,+: Difference between revisions
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|id=chr10:8091813..8091823,+
|short_description=p@chr10:8091813..8091823,+
|description=CAGE_peak_at_chr10:8091813..8091823,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:8091813..8091823,+ | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr10:8091813..8091823,+ | |||
|id=chr10:8091813..8091823,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.16e-14!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.30e-08;3!CL:0002327;7.27e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.51e-08,3;CL:0002327,7.27e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.67e-23;1 | |||
|ontology_enrichment_disease=DOID:5093!2.65e-19!4;DOID:1612!2.65e-19!4;DOID:0050687!8.96e-12!143;DOID:299!4.91e-10!25;DOID:4929!1.85e-09!2;DOID:3095!8.53e-09!22;DOID:2994!8.53e-09!22;DOID:305!6.13e-08!106;DOID:169!6.03e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.46e-88;4!DOID:1612;1.46e-88;4!DOID:7;2.37e-11;39!DOID:299;1.09e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.46e-88,4;DOID:1612,1.46e-88,4;DOID:7,2.07e-14,39;DOID:299,1.09e-08,25;DOID:305,1.65e-07,106;DOID:0050687,2.02e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003124!5.62e-16!7;UBERON:0005631!7.73e-15!14;UBERON:0000158!7.73e-15!14;UBERON:0006947!2.65e-14!3;UBERON:0004054!2.65e-14!3;UBERON:0000476!3.16e-14!3;UBERON:0000920!3.16e-14!3;UBERON:0005904!7.68e-11!4;UBERON:0002394!1.38e-10!4;UBERON:0003928!1.38e-10!4;UBERON:0002294!2.49e-10!7;UBERON:0001173!2.49e-10!7;UBERON:0004912!2.49e-10!7;UBERON:0000013!2.97e-08!5;UBERON:0002410!2.97e-08!5;UBERON:0000478!3.08e-08!24;UBERON:0000310!9.90e-08!10;UBERON:0000058!2.21e-07!26;UBERON:0004923!4.28e-07!57;UBERON:0001443!5.03e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;7.31e-36;10!UBERON:0001443;1.17e-32;11!UBERON:0001000;4.10e-23;1!UBERON:0005352;4.10e-23;1!UBERON:0000058;1.01e-09;10!UBERON:0003124;1.30e-08;3!UBERON:0000920;1.30e-08;3!UBERON:0006947;1.30e-08;3!UBERON:0004054;1.30e-08;3!UBERON:0000915;1.77e-07;52!UBERON:0001911;7.27e-07;4!UBERON:0002394;9.10e-07;4!UBERON:0005904;9.10e-07;4!UBERON:0003928;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,7.31e-36,10;UBERON:0001443,1.17e-32,11;UBERON:0001000,2.62e-23,1;UBERON:0005352,2.62e-23,1;UBERON:0006947,1.12e-08,3;UBERON:0004054,1.12e-08,3;UBERON:0000920,1.51e-08,3;UBERON:0000915,3.07e-07,52;UBERON:0001911,7.27e-07,4;UBERON:0005333,7.27e-07,4;UBERON:0008425,7.27e-07,4;UBERON:0005311,7.27e-07,4;UBERON:0005904,8.14e-07,4 | |||
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| ||
|short_description=p@chr10:8091813..8091823,+ | |||
}} | }} |
Latest revision as of 15:53, 23 July 2015
Short description: | p@chr10:8091813..8091823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8091813..8091823, + |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
mammary gland epithelial cell | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 7.31e-36 | 10 |
chest | 1.17e-32 | 11 |
vas deferens | 2.62e-23 | 1 |
spermatic cord | 2.62e-23 | 1 |
male genital duct | 1.12e-08 | 3 |
internal male genitalia | 1.12e-08 | 3 |
egg chorion | 1.51e-08 | 3 |
thoracic segment of trunk | 3.07e-07 | 52 |
mammary gland | 7.27e-07 | 4 |
mammary bud | 7.27e-07 | 4 |
mammary ridge | 7.27e-07 | 4 |
mammary placode | 7.27e-07 | 4 |
duct of male reproductive system | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.46e-88 | 4 |
breast cancer | 1.46e-88 | 4 |
disease of anatomical entity | 2.07e-14 | 39 |
adenocarcinoma | 1.09e-08 | 25 |
carcinoma | 1.65e-07 | 106 |
cell type cancer | 2.02e-07 | 143 |